Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_C12
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   184   3e-48
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.30 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.68 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   0.90 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.4  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  184 bits (447), Expect = 3e-48
 Identities = 86/112 (76%), Positives = 99/112 (88%)
 Frame = +2

Query: 194 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLX 373
           TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKL 
Sbjct: 55  TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114

Query: 374 WMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQXQS 529
            MV KWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q ++
Sbjct: 115 SMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKN 166



 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 23/38 (60%), Positives = 30/38 (78%)
 Frame = +3

Query: 531 IXKKMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKAC 644
           I  KM  II R++T+++L+ VV KL+PDSIA DIEKAC
Sbjct: 167 IRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKAC 204



 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IVDPFTRKDWYDVKAP 137
           +VDPFTRKDWYDVKAP
Sbjct: 21  VVDPFTRKDWYDVKAP 36



 Score = 30.7 bits (66), Expect = 0.042
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 139 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 231
           +MF  RQ G TLVNRTQ  +     ++G+ F
Sbjct: 37  NMFKNRQSGKTLVNRTQGTKIASDGLKGRVF 67


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 236 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXWMVKKWQT 397
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 236 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXWMVKKWQT 397
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 29  HGGREK*RPVEGR*KRC*EEDCRPIHSQRLVRCQGSALCSARGKSAPRLSTV 184
           H      RP  GR +R   ED       ++V  +G+ LC+A   +A   +T+
Sbjct: 124 HNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNAYTNTTI 175


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 195 RKLLRKD*REEFSKFPWLIYKLTLTRKGLSAN 290
           ++ + +D R E+ +FPW++    L  +    N
Sbjct: 332 QRTINEDFRAEYGEFPWMVALFQLPEQRYCCN 363


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -1

Query: 245 PGKLRKLFPS-ILPK--QFSLXWVRLTSVVPTCLLLNIERSLDIVPIF 111
           P  L +L+ S  LP+  +F+  W+ L +   T     IERS D+V ++
Sbjct: 164 PRPLWQLYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVY 211


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -1

Query: 245 PGKLRKLFPS-ILPK--QFSLXWVRLTSVVPTCLLLNIERSLDIVPIF 111
           P  L +L+ S  LP+  +F+  W+ L +   T     IERS D+V ++
Sbjct: 164 PRPLWQLYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVY 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,938
Number of Sequences: 2352
Number of extensions: 12343
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)