Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C12
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 175 6e-44
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 175 6e-44
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 175 6e-44
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 166 3e-41
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 163 2e-40
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 93 4e-19
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro... 29 7.3
BT011155-1|AAR82823.1| 745|Drosophila melanogaster AT29074p pro... 29 7.3
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD... 29 7.3
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 175 bits (425), Expect = 6e-44
Identities = 84/108 (77%), Positives = 90/108 (83%)
Frame = +2
Query: 197 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXW 376
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 377 MVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
MVKKWQTLIE ++ T DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAP 137
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 139 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 231
+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 175 bits (425), Expect = 6e-44
Identities = 84/108 (77%), Positives = 90/108 (83%)
Frame = +2
Query: 197 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXW 376
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 377 MVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
MVKKWQTLIE ++ T DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3
Query: 525 RAIXKKMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKACHGI 653
R I +M +IIT +V+ ++L+ +VNKL DSIA DIEK+C I
Sbjct: 165 RKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRI 207
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAP 137
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 139 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 231
+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 175 bits (425), Expect = 6e-44
Identities = 84/108 (77%), Positives = 90/108 (83%)
Frame = +2
Query: 197 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXW 376
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 377 MVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
MVKKWQTLIE ++ T DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3
Query: 525 RAIXKKMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKACHGI 653
R I +M +IIT +V+ ++L+ +VNKL DSIA DIEK+C I
Sbjct: 165 RKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRI 207
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAP 137
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 139 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 231
+MF RQ+G TLVNRTQ ++G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 166 bits (403), Expect = 3e-41
Identities = 79/100 (79%), Positives = 83/100 (83%)
Frame = +2
Query: 221 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLXWMVKKWQTL 400
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 401 IEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
IE ++ T DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 113
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3
Query: 525 RAIXKKMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKACHGI 653
R I +M +IIT +V+ ++L+ +VNKL DSIA DIEK+C I
Sbjct: 115 RKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRI 157
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 163 bits (396), Expect = 2e-40
Identities = 80/109 (73%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = +2
Query: 197 KIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLX 373
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 374 WMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
MVKKWQTLIE ++ T DGY+LRVFCIGFT KD SQRKTCYA +Q
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQ 164
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 540 KMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKACHGI 653
+M +IIT +V+ ++L+ +VNKL DSIA DIEK+C I
Sbjct: 172 RMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRI 209
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IVDPFTRKDWYDVKAP 137
+VDPF+RKDWYDVKAP
Sbjct: 21 VVDPFSRKDWYDVKAP 36
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 139 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 231
+MF RQ+G TLVNRTQ +G+ F
Sbjct: 37 NMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 92.7 bits (220), Expect = 4e-19
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = +2
Query: 347 MDLTTDKLXWMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 520
MDLTTDK MVKKWQTLIE ++ T DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 58
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3
Query: 525 RAIXKKMCEIITRDVTNSELRXVVNKLIPDSIAXDIEKACHGI 653
R I +M +IIT +V+ ++L+ +VNKL DSIA DIEK+C I
Sbjct: 60 RKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRI 102
>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p
protein.
Length = 1354
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/82 (21%), Positives = 31/82 (37%)
Frame = +2
Query: 320 RNVLCNFHGMDLTTDKLXWMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 499
+ + N H ++ L W + NI + T GY R + F NK+ +
Sbjct: 661 KGIFINSHALEWDRYDLDWPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELPDELNQ 720
Query: 500 CYAQHTQXQSNXKENV*NHYTR 565
A Q Q +E + H ++
Sbjct: 721 IAAIQEQLQKPGQEVITGHMSK 742
>BT011155-1|AAR82823.1| 745|Drosophila melanogaster AT29074p
protein.
Length = 745
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/82 (21%), Positives = 31/82 (37%)
Frame = +2
Query: 320 RNVLCNFHGMDLTTDKLXWMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 499
+ + N H ++ L W + NI + T GY R + F NK+ +
Sbjct: 52 KGIFINSHALEWDRYDLDWPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELPDELNQ 111
Query: 500 CYAQHTQXQSNXKENV*NHYTR 565
A Q Q +E + H ++
Sbjct: 112 IAAIQEQLQKPGQEVITGHMSK 133
>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
protein.
Length = 1354
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/82 (21%), Positives = 31/82 (37%)
Frame = +2
Query: 320 RNVLCNFHGMDLTTDKLXWMVKKWQTLIEXNIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 499
+ + N H ++ L W + NI + T GY R + F NK+ +
Sbjct: 661 KGIFINSHALEWDRYDLDWPEFNRRAQAYLNIGIPPTVGYKYRQIYMNFWNKELPDELNQ 720
Query: 500 CYAQHTQXQSNXKENV*NHYTR 565
A Q Q +E + H ++
Sbjct: 721 IAAIQEQLQKPGQEVITGHMSK 742
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,667,730
Number of Sequences: 53049
Number of extensions: 545635
Number of successful extensions: 1675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -