Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C07
(619 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3W7 Cluster: CG6987-PA; n=9; Eukaryota|Rep: CG6987-P... 123 3e-27
UniRef50_Q5ZML3 Cluster: Splicing factor, arginine/serine-rich 1... 110 3e-23
UniRef50_Q07955 Cluster: Splicing factor, arginine/serine-rich 1... 105 1e-21
UniRef50_Q13242 Cluster: Splicing factor, arginine/serine-rich 9... 90 3e-17
UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2; ... 81 2e-14
UniRef50_UPI0000586F5E Cluster: PREDICTED: hypothetical protein;... 77 3e-13
UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep... 77 4e-13
UniRef50_A3BNB8 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_UPI0000E23421 Cluster: PREDICTED: similar to SRp30c iso... 68 2e-10
UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|R... 60 4e-08
UniRef50_A5K9I6 Cluster: Splicing factor, arginine/serine-rich 1... 60 4e-08
UniRef50_Q4YYJ2 Cluster: Splicing factor, putative; n=4; Plasmod... 59 1e-07
UniRef50_Q1JSF6 Cluster: Splicing factor, putative; n=1; Toxopla... 55 1e-06
UniRef50_A2YPU5 Cluster: Putative uncharacterized protein; n=1; ... 52 8e-06
UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4... 52 8e-06
UniRef50_A5KE64 Cluster: Pre-mRNA splicing factor, putative; n=4... 50 6e-05
UniRef50_Q4Q4J4 Cluster: RNA binding protein rggm, putative; n=8... 49 8e-05
UniRef50_Q13247 Cluster: Splicing factor, arginine/serine-rich 6... 48 2e-04
UniRef50_Q13243 Cluster: Splicing factor, arginine/serine-rich 5... 47 4e-04
UniRef50_Q4YXA9 Cluster: Pre-mRNA splicing factor, putative; n=1... 46 5e-04
UniRef50_A7SXE8 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.001
UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric DNA-... 44 0.003
UniRef50_A7RSW7 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_Q4UI58 Cluster: Splicing factor (SR protein), putative;... 43 0.005
UniRef50_P78814 Cluster: Pre-mRNA-splicing factor srp2; n=1; Sch... 43 0.007
UniRef50_UPI000023EB21 Cluster: hypothetical protein FG09282.1; ... 42 0.012
UniRef50_A2R7K8 Cluster: Function: human SRp75 can complement a ... 42 0.016
UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gb... 41 0.027
UniRef50_Q6CA64 Cluster: Similar to sp|Q8VE97 Mus musculus Splic... 41 0.027
UniRef50_UPI000065E7A2 Cluster: Splicing factor, arginine/serine... 40 0.036
UniRef50_Q0UIG5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.063
UniRef50_Q17N77 Cluster: Arginine/serine-rich splicing factor; n... 38 0.19
UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep: ... 38 0.25
UniRef50_Q9VHC7 Cluster: CG9373-PA; n=3; Sophophora|Rep: CG9373-... 37 0.33
UniRef50_A7AR60 Cluster: Single stranded G-strand telomeric DNA-... 37 0.44
UniRef50_Q94KD0 Cluster: AT5g58470/mqj2_60; n=4; Arabidopsis tha... 36 0.58
UniRef50_A4RWZ2 Cluster: Predicted protein; n=1; Ostreococcus lu... 36 0.58
UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:... 36 0.58
UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Re... 36 0.58
UniRef50_UPI0000D555DA Cluster: PREDICTED: similar to CG9373-PA;... 36 1.0
UniRef50_Q32NK0 Cluster: MGC131089 protein; n=1; Xenopus laevis|... 36 1.0
UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domai... 35 1.4
UniRef50_A7AR55 Cluster: RNA recognition motif containing protei... 35 1.4
UniRef50_A3GGU4 Cluster: Predicted protein; n=5; Saccharomycetal... 35 1.4
UniRef50_UPI0000EB082D Cluster: UPI0000EB082D related cluster; n... 35 1.8
UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7; Pla... 35 1.8
UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;... 35 1.8
UniRef50_Q9P2K5 Cluster: Myelin expression factor 2; n=53; Eutel... 35 1.8
UniRef50_A5K765 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_UPI00005A145A Cluster: PREDICTED: similar to non-POU do... 34 3.1
UniRef50_Q0JQG3 Cluster: Os01g0164400 protein; n=3; Oryza sativa... 34 3.1
UniRef50_Q1ZXL1 Cluster: RNA-binding region-containing protein; ... 34 3.1
UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=... 34 3.1
UniRef50_Q6CS06 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 3.1
UniRef50_Q5KA73 Cluster: MRNA binding protein, putative; n=1; Fi... 34 3.1
UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,... 34 3.1
UniRef50_UPI0000E45D62 Cluster: PREDICTED: hypothetical protein;... 33 4.1
UniRef50_UPI000023D546 Cluster: hypothetical protein FG01463.1; ... 33 4.1
UniRef50_Q8IJZ3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q7PRR6 Cluster: ENSANGP00000017366; n=2; Culicidae|Rep:... 33 4.1
UniRef50_Q75IR8 Cluster: Putative uncharacterized protein OSJNBb... 33 5.5
UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere bin... 33 5.5
UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27; Euteleos... 33 5.5
UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic... 33 7.2
UniRef50_UPI00015B4403 Cluster: PREDICTED: similar to myelinprot... 33 7.2
UniRef50_A7T285 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.5
>UniRef50_Q9V3W7 Cluster: CG6987-PA; n=9; Eukaryota|Rep: CG6987-PA -
Drosophila melanogaster (Fruit fly)
Length = 255
Score = 123 bits (297), Expect = 3e-27
Identities = 66/130 (50%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F FGKVTFVDLKNR+GPPFAFVEFED LRVEF
Sbjct: 27 FHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPRGGGPGS 86
Query: 414 XXXXXXXXXXXXXXXXXXXXX--XXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
+YRV+VTGLP SGSWQDLKDHMR AGDVCFA T
Sbjct: 87 YRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADT 146
Query: 588 FKDGSGVVEF 617
+KDGSGVVEF
Sbjct: 147 YKDGSGVVEF 156
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 161 NRNECRIYVGNLPPDIRTKDIQDLFYNVRK 250
+RNECRIYVGNLPPDIRTKDIQDLF+ K
Sbjct: 3 SRNECRIYVGNLPPDIRTKDIQDLFHKFGK 32
>UniRef50_Q5ZML3 Cluster: Splicing factor, arginine/serine-rich 1;
n=5; Euteleostomi|Rep: Splicing factor,
arginine/serine-rich 1 - Gallus gallus (Chicken)
Length = 257
Score = 110 bits (264), Expect = 3e-23
Identities = 59/129 (45%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
EYRV+V+GLPPSGSWQDLKDHMR AGDVC+A F
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--EYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVF 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>UniRef50_Q07955 Cluster: Splicing factor, arginine/serine-rich 1;
n=43; Deuterostomia|Rep: Splicing factor,
arginine/serine-rich 1 - Homo sapiens (Human)
Length = 248
Score = 105 bits (251), Expect = 1e-21
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>UniRef50_Q13242 Cluster: Splicing factor, arginine/serine-rich 9;
n=65; Eukaryota|Rep: Splicing factor,
arginine/serine-rich 9 - Homo sapiens (Human)
Length = 221
Score = 90.2 bits (214), Expect = 3e-17
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 431
Score = 81.0 bits (191), Expect = 2e-14
Identities = 47/134 (35%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPP-FAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEF 389
+R + F +G++ +DLK PP +AFVEFEDP LRVE
Sbjct: 193 EREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRYNFDGYRLRVEL 252
Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGD 569
EYRV+VTGLP S SWQDLKDHMR AGD
Sbjct: 253 AHGGRGQSYSYDRPRSYSSGRRGGVSRRS----EYRVMVTGLPSSASWQDLKDHMRRAGD 308
Query: 570 VCFAXTFKDGSGVV 611
VCF+ +++ V
Sbjct: 309 VCFSDVYREAGATV 322
Score = 39.9 bits (89), Expect = 0.047
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 164 RNECRIYVGNLPPDIRTKDIQDLFY 238
RN IYVGNLP DIR ++++DLFY
Sbjct: 177 RNSRTIYVGNLPGDIREREVEDLFY 201
>UniRef50_UPI0000586F5E Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 287
Score = 77.4 bits (182), Expect = 3e-13
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
YRV+V+GLP +GSWQDLKDHMR AGDVC+A ++DG+GVVEF
Sbjct: 111 YRVIVSGLPSTGSWQDLKDHMREAGDVCYADVYRDGTGVVEF 152
>UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep:
T14P8.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 294
Score = 76.6 bits (180), Expect = 4e-13
Identities = 47/138 (34%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPP-FAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEF 389
+R + F+ +G V +DLK PP +AFVEFED LRVE
Sbjct: 20 EREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVEL 79
Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXEYRVLVTGLPPSGSWQDLKDH 551
EYRV+V+GLP S SWQDLKDH
Sbjct: 80 AHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDH 139
Query: 552 MRXAGDVCFAXTFKDGSG 605
MR G+VCF+ F+DG G
Sbjct: 140 MRKGGEVCFSQVFRDGRG 157
Score = 35.5 bits (78), Expect = 1.0
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 161 NRNECRIYVGNLPPDIRTKDIQDLF 235
+R+ IYVGNLP DIR ++++DLF
Sbjct: 3 SRSSRTIYVGNLPGDIREREVEDLF 27
>UniRef50_A3BNB8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 303
Score = 70.9 bits (166), Expect = 2e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVV 611
EYRVLVTGLP S SWQDLKDHMR AGDVC++ +++G G +
Sbjct: 199 EYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 239
Score = 37.5 bits (83), Expect = 0.25
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFY 238
G R IYVGNLP DIR ++++DLFY
Sbjct: 69 GRMSRRWSRTIYVGNLPGDIREREVEDLFY 98
>UniRef50_UPI0000E23421 Cluster: PREDICTED: similar to SRp30c
isoform 1; n=2; Eutheria|Rep: PREDICTED: similar to
SRp30c isoform 1 - Pan troglodytes
Length = 178
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 510 GLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
GLPPSGSWQDLKDHMR AGDVC+A KDG G+VE+
Sbjct: 74 GLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEY 109
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
Score = 36.7 bits (81), Expect = 0.44
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDP 317
F +G++ ++LKNR G PFAFV FEDP
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDP 62
>UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|Rep:
Splice factor - Toxoplasma gondii
Length = 345
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
E+RV V GLPP+ SWQDLKDHMR AGDV +A + G GVVE+
Sbjct: 130 EFRVRVYGLPPTASWQDLKDHMRRAGDVGYA-NIEGGVGVVEY 171
>UniRef50_A5K9I6 Cluster: Splicing factor, arginine/serine-rich 1,
putative; n=6; Aconoidasida|Rep: Splicing factor,
arginine/serine-rich 1, putative - Plasmodium vivax
Length = 314
Score = 60.1 bits (139), Expect = 4e-08
Identities = 42/129 (32%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNR-KGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + D+K G FAF+EFED LRVE
Sbjct: 28 FRKYGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDN 87
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
Y V V+GLP SGSWQDLKDH+R AG+ A F
Sbjct: 88 GKYSSRGGRGMMGRGMKSRRG-----RYVVEVSGLPLSGSWQDLKDHLREAGECGHADVF 142
Query: 591 KDGSGVVEF 617
K+G G V F
Sbjct: 143 KNGLGEVSF 151
>UniRef50_Q4YYJ2 Cluster: Splicing factor, putative; n=4;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
berghei
Length = 287
Score = 58.8 bits (136), Expect = 1e-07
Identities = 41/125 (32%), Positives = 49/125 (39%), Gaps = 1/125 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNR-KGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F FG + D+K G FAF+EFED LRVE
Sbjct: 28 FRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGCDFGGNKLRVEVPFNARDN 87
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
Y V V+GLP SGSWQDLKDH+R AG+ A F
Sbjct: 88 GKYNSRGRGMMGRGSKSRRG------RYVVEVSGLPLSGSWQDLKDHLREAGECGHADVF 141
Query: 591 KDGSG 605
K+G+G
Sbjct: 142 KNGTG 146
>UniRef50_Q1JSF6 Cluster: Splicing factor, putative; n=1; Toxoplasma
gondii|Rep: Splicing factor, putative - Toxoplasma
gondii
Length = 216
Score = 55.2 bits (127), Expect = 1e-06
Identities = 41/129 (31%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Frame = +3
Query: 243 FGKVTFVDLKNRKGPP----FAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
FG++ +D+K +G +AFVEFE LRVEF
Sbjct: 54 FGRLRDIDIKRARGGMSDSCYAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPARR 113
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
+R LV+ LPP WQ LKDHMR AG V FA
Sbjct: 114 LGSNPNFIPMGGASGPPRRTG------FRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVL 167
Query: 591 KDGSGVVEF 617
G GVVEF
Sbjct: 168 SHGRGVVEF 176
>UniRef50_A2YPU5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 257
Score = 52.4 bits (120), Expect = 8e-06
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDV 572
RVLVTGLP S SWQDLKDHMR AGDV
Sbjct: 172 RVLVTGLPSSASWQDLKDHMRNAGDV 197
Score = 39.1 bits (87), Expect = 0.083
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 137 IMSGGSSXNRNECRIYVGNLPPDIRTKDIQDLFY 238
+++ G R IYVGNLP DIR ++++DLFY
Sbjct: 61 VLAEGRMSRRWSRTIYVGNLPGDIREREVEDLFY 94
>UniRef50_Q08170 Cluster: Splicing factor, arginine/serine-rich 4;
n=41; Coelomata|Rep: Splicing factor,
arginine/serine-rich 4 - Homo sapiens (Human)
Length = 494
Score = 52.4 bits (120), Expect = 8e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>UniRef50_A5KE64 Cluster: Pre-mRNA splicing factor, putative; n=4;
Plasmodium|Rep: Pre-mRNA splicing factor, putative -
Plasmodium vivax
Length = 544
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGP----PFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXX 401
F FG++ ++D+K + P FAFV + D LRVE+
Sbjct: 33 FAKFGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEYAIDRRDGYKYDGVRLRVEYSGEN 92
Query: 402 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFA 581
E+R++++ LP S WQ LKD MR GDV +A
Sbjct: 93 KSYGKYRKKEEGAGPPVRT----------EHRIIISNLPESCKWQHLKDVMRQCGDVGYA 142
Query: 582 XTFKDGSGVVEF 617
+ G GVVEF
Sbjct: 143 -NIERGRGVVEF 153
>UniRef50_Q4Q4J4 Cluster: RNA binding protein rggm, putative; n=8;
Trypanosomatidae|Rep: RNA binding protein rggm, putative
- Leishmania major
Length = 351
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
RV V+GL +W LKDH+R AGD+ F F G G+VEF
Sbjct: 233 RVQVSGLSDETTWHTLKDHLRQAGDITFCRLFSGGRGMVEF 273
>UniRef50_Q13247 Cluster: Splicing factor, arginine/serine-rich 6;
n=94; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 6 - Homo sapiens (Human)
Length = 344
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>UniRef50_Q13243 Cluster: Splicing factor, arginine/serine-rich 5;
n=62; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 5 - Homo sapiens (Human)
Length = 272
Score = 46.8 bits (106), Expect = 4e-04
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F +G++ +DLK +G F FVEFEDP + +E
Sbjct: 24 FKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGG 79
Query: 414 XXXXXXXXXXXXXXXXXXXXXX--XXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
E R++V L SWQDLKD MR AG+V FA
Sbjct: 80 RGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 139
Query: 588 F--KDGSGVVEF 617
K GVVEF
Sbjct: 140 HRPKLNEGVVEF 151
>UniRef50_Q4YXA9 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium berghei|Rep: Pre-mRNA splicing factor,
putative - Plasmodium berghei
Length = 457
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
E+R++V+ LP + WQ LKD MR GDV +A + G G+VEF
Sbjct: 76 EHRIIVSNLPDNCKWQHLKDIMRQCGDVGYA-NIEHGKGIVEF 117
>UniRef50_A7SXE8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 188
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF--KDGSGVVEF 617
E+RV+V L W +LK+ M AG+VC+A T + G GVVEF
Sbjct: 101 EFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGEGVVEF 145
>UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric
DNA-binding protein; n=3; Cryptosporidium|Rep:
Single-stranded G-strand telomeric DNA-binding protein -
Cryptosporidium hominis
Length = 198
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD------GSGVVEF 617
RV V LP W DLKDHMR AG+V A F+D G GVVE+
Sbjct: 8 RVYVGNLPWKAKWHDLKDHMRQAGNVIRADVFEDEVGRSRGCGVVEY 54
>UniRef50_A7RSW7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 548
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHM-RXAGDVCFAXTFKD------GSGVVEF 617
E +V V+ +P WQ+LKDHM + GDV FA F+D G GVVEF
Sbjct: 92 EKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKGCGVVEF 141
Score = 33.1 bits (72), Expect = 5.5
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
+V V LP +WQDLKD R AG V A + SG
Sbjct: 471 QVFVRNLPWKYTWQDLKDKFRPAGKVMRADILTEPSG 507
>UniRef50_Q4UI58 Cluster: Splicing factor (SR protein), putative;
n=2; Theileria|Rep: Splicing factor (SR protein),
putative - Theileria annulata
Length = 341
Score = 43.2 bits (97), Expect = 0.005
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 3/138 (2%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGP---PFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRV 383
+R F FG++ VD+K+ K +AF+EF LRV
Sbjct: 26 ERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAEDAVDSRDGYEYDRYRLRV 85
Query: 384 EFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXA 563
EF +YR++++ LP WQ LKDHMR A
Sbjct: 86 EFAGEKKPRRYPSYDRPRDRDRSNRYPPPTRT---DYRLVISNLPHGCRWQHLKDHMRKA 142
Query: 564 GDVCFAXTFKDGSGVVEF 617
G V + G G V++
Sbjct: 143 GPVGYV-NIVHGKGFVDY 159
Score = 32.7 bits (71), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G NR+ ++VGNLP + +DI DLF
Sbjct: 5 GGKANRSPSCVFVGNLPDRVDERDIHDLF 33
>UniRef50_P78814 Cluster: Pre-mRNA-splicing factor srp2; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-splicing factor
srp2 - Schizosaccharomyces pombe (Fission yeast)
Length = 365
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
+R++V L SWQDLKD MR AG+ F ++ G+GVVEF
Sbjct: 98 FRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPGAGVVEF 141
>UniRef50_UPI000023EB21 Cluster: hypothetical protein FG09282.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09282.1 - Gibberella zeae PH-1
Length = 330
Score = 41.9 bits (94), Expect = 0.012
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAG-DVCFAXTFKD--GSGVVEF 617
+R+ +TGLP SWQDLKD R + DV ++ T +D G G VEF
Sbjct: 103 HRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNGRGFVEF 147
>UniRef50_A2R7K8 Cluster: Function: human SRp75 can complement a
splicing-deficient extract; n=14; Pezizomycotina|Rep:
Function: human SRp75 can complement a
splicing-deficient extract - Aspergillus niger
Length = 367
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAG-DVCFAXTFKD-GSGVVEF 617
+R++V+GLP + SWQDLKD R +G DV ++ T ++ G G VEF
Sbjct: 101 FRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELGRGFVEF 143
>UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gbp1
- Griffithsia japonica (Red alga)
Length = 156
Score = 40.7 bits (91), Expect = 0.027
Identities = 20/37 (54%), Positives = 21/37 (56%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
RV V L WQ LKDHMR AGDV A F + SG
Sbjct: 26 RVYVGNLSWDTRWQGLKDHMREAGDVVHAEVFTEASG 62
>UniRef50_Q6CA64 Cluster: Similar to sp|Q8VE97 Mus musculus Splicing
factor; n=1; Yarrowia lipolytica|Rep: Similar to
sp|Q8VE97 Mus musculus Splicing factor - Yarrowia
lipolytica (Candida lipolytica)
Length = 314
Score = 40.7 bits (91), Expect = 0.027
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAG-DVCFAXTFKD--GSGVVEF 617
+RV ++GL P SWQDLKD R A DV + +D G G VEF
Sbjct: 86 FRVNISGLAPGVSWQDLKDFGRTADVDVTYTNVSRDREGEGTVEF 130
>UniRef50_UPI000065E7A2 Cluster: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C).; n=1; Takifugu rubripes|Rep: Splicing factor,
arginine/serine-rich 9 (Pre-mRNA-splicing factor
SRp30C). - Takifugu rubripes
Length = 183
Score = 40.3 bits (90), Expect = 0.036
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGP-PFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEF 389
+R + F +GK+ ++LKN +G PFAF+ FEDP LRVE+
Sbjct: 17 ERDIEDLFYKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGYVYGDSKLRVEY 76
Score = 39.9 bits (89), Expect = 0.047
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFYNVRK 250
RIYVGNLP D++ +DI+DLFY K
Sbjct: 5 RIYVGNLPMDVQERDIEDLFYKYGK 29
>UniRef50_Q0UIG5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 344
Score = 39.5 bits (88), Expect = 0.063
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAG-DVCFAXT--FKDGSGVVEF 617
YR+ + LP SWQDLKD R +G DV ++ +DG+G VE+
Sbjct: 104 YRMRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEY 148
>UniRef50_Q17N77 Cluster: Arginine/serine-rich splicing factor; n=2;
Aedes aegypti|Rep: Arginine/serine-rich splicing factor
- Aedes aegypti (Yellowfever mosquito)
Length = 247
Score = 37.9 bits (84), Expect = 0.19
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
+R++V L W++LK +MR AG+V FA +D GVVEF
Sbjct: 92 HRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMNEGVVEF 135
>UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep:
Hrp59 protein - Chironomus tentans (Midge)
Length = 525
Score = 37.5 bits (83), Expect = 0.25
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
+LV LP S +WQ+L+D R G+V FA +GVV F
Sbjct: 458 ILVRNLPSSWTWQNLRDKFRDVGEVKFAEIRGLDTGVVRF 497
>UniRef50_Q9VHC7 Cluster: CG9373-PA; n=3; Sophophora|Rep: CG9373-PA
- Drosophila melanogaster (Fruit fly)
Length = 632
Score = 37.1 bits (82), Expect = 0.33
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 155 SXNRNECRIYVGNLPPDIRTKDIQDLFYNV 244
S R CR+Y+ N+P D R +D++DLF +
Sbjct: 51 SRERRNCRVYISNIPYDYRWQDLKDLFRRI 80
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
+++ +P + +WQ L+D R GDV FA + GVV F
Sbjct: 565 IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRF 604
>UniRef50_A7AR60 Cluster: Single stranded G-strand telomeric
DNA-binding protein, putative; n=3; Piroplasmida|Rep:
Single stranded G-strand telomeric DNA-binding protein,
putative - Babesia bovis
Length = 196
Score = 36.7 bits (81), Expect = 0.44
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD------GSGVVEF 617
RV V L WQDLKDHM+ G+V A +D G G+VEF
Sbjct: 8 RVYVGNLSWRVKWQDLKDHMKQVGEVIRADIIEDFDGKSKGCGIVEF 54
>UniRef50_Q94KD0 Cluster: AT5g58470/mqj2_60; n=4; Arabidopsis
thaliana|Rep: AT5g58470/mqj2_60 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 422
Score = 36.3 bits (80), Expect = 0.58
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 161 NRNECRIYVGNLPPDIRTKDIQDLF 235
N + RIY+ NLPPD+ T +++DLF
Sbjct: 276 NCDNARIYISNLPPDVTTDELKDLF 300
>UniRef50_A4RWZ2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 129
Score = 36.3 bits (80), Expect = 0.58
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E+ V V LP W+D+KD R AG V +A TF
Sbjct: 96 EHSVKVEDLPRGADWRDVKDAFRRAGRVTYASTF 129
>UniRef50_Q380H3 Cluster: ENSANGP00000026392; n=2; Culicidae|Rep:
ENSANGP00000026392 - Anopheles gambiae str. PEST
Length = 563
Score = 36.3 bits (80), Expect = 0.58
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
+++ +P S +WQ L+D R G+V FA +GVV F
Sbjct: 496 IIIRNMPSSWTWQTLRDKFRDVGEVKFAEIRGQDTGVVRF 535
Score = 35.5 bits (78), Expect = 1.0
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
R+ V+ +P WQDLKD R GDV F F D G G+VEF
Sbjct: 24 RIYVSNVPYEYRWQDLKDLFRKEVGDVSFVELFHDENNKPRGCGIVEF 71
>UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Rep:
Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 454
Score = 36.3 bits (80), Expect = 0.58
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGV 608
+ V+V LP S +WQ LKD + G+V A DG GV
Sbjct: 261 HEVIVKNLPASVNWQALKDIFKECGNVAHADVELDGDGV 299
>UniRef50_UPI0000D555DA Cluster: PREDICTED: similar to CG9373-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9373-PA - Tribolium castaneum
Length = 573
Score = 35.5 bits (78), Expect = 1.0
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRX-AGDVCFAXTFKD------GSGVVEF 617
RV V+ +P WQDLKD R GDV F F D G G+VEF
Sbjct: 49 RVYVSNIPYEYRWQDLKDLFRSQVGDVQFVELFVDDNDKSRGCGIVEF 96
Score = 32.7 bits (71), Expect = 7.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 167 NECRIYVGNLPPDIRTKDIQDLF 235
+ CR+YV N+P + R +D++DLF
Sbjct: 46 SNCRVYVSNIPYEYRWQDLKDLF 68
>UniRef50_Q32NK0 Cluster: MGC131089 protein; n=1; Xenopus
laevis|Rep: MGC131089 protein - Xenopus laevis (African
clawed frog)
Length = 673
Score = 35.5 bits (78), Expect = 1.0
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G+GVVEF
Sbjct: 130 RVFISNIPYDMKWQAIKDLMRDKVGEVTYVELFKDAEGKSRGNGVVEF 177
>UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domains;
n=2; Cryptosporidium|Rep: Splicing factor SRP40 like 2x
RRM domains - Cryptosporidium parvum Iowa II
Length = 416
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFK-DGS--GVVEF 617
+RV V L + SW+DLKD+ R G+V ++ F G GVVE+
Sbjct: 118 FRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEY 162
>UniRef50_A7AR55 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 382
Score = 35.1 bits (77), Expect = 1.4
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 504 VTGLPPSGSWQDLKDHMRXAGDVCFAXT-FKDGS--GVVEF 617
V L S SWQDLKD R AG+V +A +D G+VEF
Sbjct: 263 VLNLDNSASWQDLKDFARQAGEVVYASVIIRDQKRYGLVEF 303
>UniRef50_A3GGU4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 271
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMR 557
+YRV +T LP + +WQDLKD +R
Sbjct: 84 KYRVKITNLPDNAAWQDLKDFVR 106
>UniRef50_UPI0000EB082D Cluster: UPI0000EB082D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB082D UniRef100
entry - Canis familiaris
Length = 611
Score = 34.7 bits (76), Expect = 1.8
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G GVVEF
Sbjct: 38 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 85
>UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 250
Score = 34.7 bits (76), Expect = 1.8
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD------GSGVVEF 617
RV V LP +W LK HM+ AGDV F+D G G+VE+
Sbjct: 22 RVYVGNLPWKVTWPVLKTHMKKAGDVVRVDIFEDTQGRSKGCGIVEY 68
>UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;
n=2; Filobasidiella neoformans|Rep: Telomere maintenance
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 951
Score = 34.7 bits (76), Expect = 1.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
+ V+ LP S WQDLKD +R AG + A D G
Sbjct: 516 IFVSNLPLSMQWQDLKDMLRPAGTIIRADVATDAHG 551
>UniRef50_Q9P2K5 Cluster: Myelin expression factor 2; n=53;
Euteleostomi|Rep: Myelin expression factor 2 - Homo
sapiens (Human)
Length = 600
Score = 34.7 bits (76), Expect = 1.8
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G GVVEF
Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 148
>UniRef50_A5K765 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 778
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGS----GVVEF 617
R++V + SWQDLKD R G V +A +D + G++E+
Sbjct: 331 RIVVKNIDEKASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEY 375
>UniRef50_UPI00005A145A Cluster: PREDICTED: similar to non-POU
domain containing, octamer-binding; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to non-POU domain
containing, octamer-binding - Canis familiaris
Length = 364
Score = 33.9 bits (74), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF RK+
Sbjct: 65 GEKTFTQHSRLFVGNLPPDITGEEMRKLFEKYRKA 99
>UniRef50_Q0JQG3 Cluster: Os01g0164400 protein; n=3; Oryza
sativa|Rep: Os01g0164400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 283
Score = 33.9 bits (74), Expect = 3.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 167 NECRIYVGNLPPDIRTKDIQDLF 235
+ RIY+ NLPPD+ +++Q+LF
Sbjct: 144 DNARIYISNLPPDVTVEELQELF 166
>UniRef50_Q1ZXL1 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 737
Score = 33.9 bits (74), Expect = 3.1
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 98 ISKRLSNNNIL*PIMSGGSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
+S + S N+ +S GS I+VGNLP D KDI++LF N KS
Sbjct: 118 LSDKSSGNSSGSGSLSSGSDTKET---IFVGNLPRDTIVKDIENLFKNYVKS 166
>UniRef50_A5K369 Cluster: U2 snRNP auxiliary factor, putative; n=5;
Plasmodium|Rep: U2 snRNP auxiliary factor, putative -
Plasmodium vivax
Length = 914
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 LVDEANIIISKRLSNNNIL*PIMSGGSSX--NRNECRIYVGNLPPDIRTKDIQDLFYNVR 247
L+ + N+ ++ L NN + P+ ++ + ++Y+GN+PP+ + +++ D F N
Sbjct: 509 LLQQQNLALANGLGPNNKVSPLGRNPYEVEGDKKQRKLYIGNIPPNSKQEELIDFFNNTL 568
Query: 248 KSNVR 262
S ++
Sbjct: 569 ASIIK 573
>UniRef50_Q6CS06 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
+ V V LP S +WQ+LKD + GDV A D G
Sbjct: 62 FEVFVAQLPFSVNWQELKDMFKPCGDVLHADVVTDRDG 99
>UniRef50_Q5KA73 Cluster: MRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: MRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 274
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGD-VCFAXTFK--DGSGVVEF 617
R+ V+G SWQDLKD+ R G+ + +A K G GV+E+
Sbjct: 92 RINVSGFSSETSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEY 135
>UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,
putative; n=2; Filobasidiella neoformans|Rep:
Protein-nucleus import-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 563
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDV 572
+ V LP SWQDLKD MR AG+V
Sbjct: 294 LFVGNLPLQASWQDLKDLMRQAGEV 318
>UniRef50_UPI0000E45D62 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 734
Score = 33.5 bits (73), Expect = 4.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
+V V LP S SWQ LKD + G+V FA D G
Sbjct: 658 QVFVRNLPFSYSWQKLKDVFKDVGNVTFASVKTDERG 694
>UniRef50_UPI000023D546 Cluster: hypothetical protein FG01463.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01463.1 - Gibberella zeae PH-1
Length = 641
Score = 33.5 bits (73), Expect = 4.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFED 314
+ + K +TFG +TFV++ RKG FA+V+F +
Sbjct: 520 EALLKQTLSTFGTITFVEIDKRKG--FAYVDFAE 551
>UniRef50_Q8IJZ3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 880
Score = 33.5 bits (73), Expect = 4.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF-----KDGSGVVEF 617
R++V + SWQDLKD R G V +A K+ G++EF
Sbjct: 441 RIVVKNIDEKASWQDLKDFGREVGSVSYANIVDDYHSKEKFGIIEF 486
>UniRef50_Q7PRR6 Cluster: ENSANGP00000017366; n=2; Culicidae|Rep:
ENSANGP00000017366 - Anopheles gambiae str. PEST
Length = 292
Score = 33.5 bits (73), Expect = 4.1
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 179 IYVGNLPPDIRTKDIQDLFYNVRKSNVR*PKEQKRSAIRVRG 304
+YV NLP DI D+ D+F NV ++ P++ + R+RG
Sbjct: 89 VYVSNLPYDINENDLYDIFENVEIVSMTLPRDDSET-WRLRG 129
>UniRef50_Q75IR8 Cluster: Putative uncharacterized protein
OSJNBb0099P06.5; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0099P06.5 - Oryza sativa
subsp. japonica (Rice)
Length = 338
Score = 33.1 bits (72), Expect = 5.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDP 317
F+ +G+V FVDLKN G FVEF DP
Sbjct: 38 FSRYGRVRFVDLKNEYG----FVEFSDP 61
>UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere
binding-protein; n=2; Chlamydomonas|Rep: G strand
binding-protein 1/telomere binding-protein -
Chlamydomonas incerta
Length = 225
Score = 33.1 bits (72), Expect = 5.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSG 605
R V L SWQDLKD R G+V + +D G
Sbjct: 12 RCFVGNLAWKTSWQDLKDKFRECGNVVYTNVMRDDDG 48
>UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27;
Euteleostomi|Rep: Paraspeckle component 1 - Homo sapiens
(Human)
Length = 523
Score = 33.1 bits (72), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>UniRef50_UPI00015B58CC Cluster: PREDICTED: similar to eukaryotic
initiation factor 4B protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to eukaryotic
initiation factor 4B protein - Nasonia vitripennis
Length = 555
Score = 32.7 bits (71), Expect = 7.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 182 YVGNLPPDIRTKDIQDLFYNVRKSNVR*PKE 274
Y+ NLP D+ +D+ + F +++ S++R PKE
Sbjct: 85 YISNLPYDVEEEDLIEFFQDMKVSSMRLPKE 115
>UniRef50_UPI00015B4403 Cluster: PREDICTED: similar to myelinprotein
expression factor; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to myelinprotein expression factor -
Nasonia vitripennis
Length = 566
Score = 32.7 bits (71), Expect = 7.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 498 VLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVVEF 617
+++ LPP+ +WQ L+D + G+V FA G+V F
Sbjct: 499 IVIANLPPNTTWQMLRDKCQDIGEVKFAEMRGADVGMVRF 538
>UniRef50_A7T285 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 278
Score = 32.3 bits (70), Expect = 9.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 152 SSXNRNECRIYVGNLPPDIRTKDIQDLF 235
S ++ E ++YVGNLP D + +Q+LF
Sbjct: 45 SGSHQEESKLYVGNLPDDCQKHQLQELF 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,257,652
Number of Sequences: 1657284
Number of extensions: 8085844
Number of successful extensions: 18583
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 17992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18577
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -