Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C07
(619 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0967 + 12786219-12786305,12786716-12786781,12786897-127869... 84 1e-16
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 78 5e-15
07_03_1654 - 28416487-28416548,28416791-28416824,28418156-284182... 71 7e-13
01_03_0047 + 11939747-11939857,11940058-11940121,11940123-119402... 67 1e-11
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 34 0.10
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 33 0.18
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 31 0.73
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 31 0.97
05_03_0022 + 7452234-7452389,7452955-7453113 30 1.7
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 29 3.9
03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800 29 3.9
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 29 3.9
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 28 5.2
08_02_1559 - 27873345-27873407,27873549-27873830,27874162-278742... 28 5.2
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 28 5.2
06_02_0024 - 10714741-10716241,10716774-10717840 28 6.8
03_05_0680 + 26682010-26682030,26682675-26682869,26684203-266844... 28 6.8
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 27 9.0
05_03_0025 + 7462272-7462412,7462865-7463032 27 9.0
>03_02_0967 +
12786219-12786305,12786716-12786781,12786897-12786971,
12787054-12787162,12787253-12787299,12787396-12787453,
12788193-12788242,12788459-12788504,12788758-12788808,
12789376-12789478,12789923-12789956,12790210-12790224
Length = 246
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/134 (37%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPP-FAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEF 389
+R + F +G++ +DLK PP +AFVEFEDP LRVE
Sbjct: 20 EREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVE- 78
Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGD 569
EYRVLVTGLP S SWQDLKDHMR AGD
Sbjct: 79 --PAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGD 136
Query: 570 VCFAXTFKDGSGVV 611
VCF+ +++G G V
Sbjct: 137 VCFSEVYREGGGTV 150
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 179 IYVGNLPPDIRTKDIQDLFY 238
IYVGNLP DIR ++++DLFY
Sbjct: 9 IYVGNLPGDIREREVEDLFY 28
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 78.2 bits (184), Expect = 5e-15
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPP-FAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEF 389
+R + F +G++ +DLK PP +AFVEFEDP LRVE
Sbjct: 20 EREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVEL 79
Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGD 569
+YRV+VTGLP S SWQDLKDHMR AGD
Sbjct: 80 AHGGRGPSFDRSSSYSSAGRRGAAKRT------DYRVMVTGLPSSASWQDLKDHMRRAGD 133
Query: 570 VCFAXTFKDGSGVV 611
VCF+ +++G +
Sbjct: 134 VCFSDVYREGGATI 147
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 164 RNECRIYVGNLPPDIRTKDIQDLFY 238
RN IYVGNLP DIR ++++DLFY
Sbjct: 4 RNSRTIYVGNLPGDIREREVEDLFY 28
>07_03_1654 -
28416487-28416548,28416791-28416824,28418156-28418212,
28418401-28418450,28418968-28419025,28419136-28419182,
28419278-28419377,28419446-28419586,28419715-28419780,
28420024-28420118,28420440-28420629
Length = 299
Score = 70.9 bits (166), Expect = 7e-13
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVV 611
EYRVLVTGLP S SWQDLKDHMR AGDVC++ +++G G +
Sbjct: 195 EYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTI 235
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 137 IMSGGSSXNRNECRIYVGNLPPDIRTKDIQDLFY 238
+++ G R IYVGNLP DIR ++++DLFY
Sbjct: 61 VLAEGRMSRRWSRTIYVGNLPGDIREREVEDLFY 94
>01_03_0047 +
11939747-11939857,11940058-11940121,11940123-11940253,
11940325-11940432,11942735-11942783,11943188-11943279,
11944394-11944468,11944553-11944658,11944740-11944786,
11944856-11944913,11945299-11945348,11945728-11945784,
11945909-11945916,11946020-11946055,11946904-11946937,
11947030-11947092,11947223-11947237
Length = 367
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKDGSGVV 611
EYRV+VTGLP S SWQDLKDHMR AGDVCF+ +++ V
Sbjct: 243 EYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATV 283
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 164 RNECRIYVGNLPPDIRTKDIQDLFY 238
RN IYVGNLP DIR ++++DLFY
Sbjct: 160 RNSRTIYVGNLPGDIREREVEDLFY 184
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 33.9 bits (74), Expect = 0.10
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 167 NECRIYVGNLPPDIRTKDIQDLF 235
+ RIY+ NLPPD+ +++Q+LF
Sbjct: 439 DNARIYISNLPPDVTVEELQELF 461
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDP 317
F+ +G+V FVDLKN G FVEF DP
Sbjct: 38 FSRYGRVRFVDLKNEYG----FVEFSDP 61
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNV-RKSNVR*PKEQKRSAIR 295
GSS +I+VG LP + T+D++ F R + PK+ KRS R
Sbjct: 231 GSSQGMGNKKIFVGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHR 280
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNV 244
G N +YVGNLP D+ + D+ F+++
Sbjct: 357 GPENNPQYTTVYVGNLPHDVNSNDVHRFFHSL 388
>05_03_0022 + 7452234-7452389,7452955-7453113
Length = 104
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF--YNVRKSNVR*PKEQKRS 286
GS E R+YVGNLP + ++D F Y S + +E RS
Sbjct: 15 GSDSKGQESRVYVGNLPYRADERSLKDSFSNYGAVSSEIAVDRETGRS 62
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFYNVRKSNVR 262
R+YVGNL DI D++ F + + S++R
Sbjct: 268 RVYVGNLAWDITEDDLKKFFSDCKISSIR 296
>03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800
Length = 252
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 182 YVGNLPPDIRTKDIQDLFYNVRKSNVR 262
YVGNL D+ D++D F +++ S++R
Sbjct: 176 YVGNLKWDVTETDLRDFFKSLKISSIR 202
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLF 235
R+YVG L RT+D++DLF
Sbjct: 19 RLYVGRLSSRTRTRDLEDLF 38
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 170 ECRIYVGNLPPDIRTKDIQDLF 235
E ++YVGNLP DI ++ + LF
Sbjct: 142 EAKVYVGNLPYDIDSERLAQLF 163
>08_02_1559 -
27873345-27873407,27873549-27873830,27874162-27874263,
27874402-27874872
Length = 305
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 170 ECRIYVGNLPPDIRTKDIQDLF 235
E ++YVGNLP D+ ++ + LF
Sbjct: 126 EAKVYVGNLPYDVDSEGLAQLF 147
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLF 235
R+YVGNL P + ++I+D F
Sbjct: 3 RVYVGNLDPRVTAREIEDEF 22
>06_02_0024 - 10714741-10716241,10716774-10717840
Length = 855
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 516 PPSGSWQDLKDHMRXAGD 569
PP G W D KD + AGD
Sbjct: 45 PPGGVWSDAKDGVHLAGD 62
>03_05_0680 +
26682010-26682030,26682675-26682869,26684203-26684428,
26684602-26685221
Length = 353
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 130 LAYNVGWKQXQQK*VS---YICWKLTTGHKDKGYSRLVLQ 240
L+YN+G +Q +K +S Y+ KL G DK S+++ +
Sbjct: 265 LSYNIGRRQMLEKIISFNRYLMLKLAPGEGDKVLSKVITE 304
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLF 235
R+YVGNL P + ++++D F
Sbjct: 3 RVYVGNLDPRVTARELEDEF 22
>05_03_0025 + 7462272-7462412,7462865-7463032
Length = 102
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 170 ECRIYVGNLPPDIRTKDIQDLFYN 241
E R+YVGNLP + ++D F N
Sbjct: 17 EYRVYVGNLPFSANDRSLKDSFAN 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,713,510
Number of Sequences: 37544
Number of extensions: 216022
Number of successful extensions: 588
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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