Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C07
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 105 2e-22
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 105 2e-22
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 105 2e-22
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 105 2e-22
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 105 2e-22
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 105 2e-22
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 105 2e-22
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 90 5e-18
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 90 5e-18
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 90 5e-18
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 90 5e-18
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 90 5e-18
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 52 1e-06
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 52 1e-06
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 52 1e-06
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 52 1e-06
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 52 1e-06
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 52 1e-06
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 52 1e-06
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 48 4e-05
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 48 4e-05
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 48 4e-05
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 48 4e-05
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 48 4e-05
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 48 4e-05
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 47 6e-05
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 47 6e-05
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 47 6e-05
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 47 6e-05
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 35 0.26
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 35 0.26
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 35 0.26
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 33 0.81
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 33 0.81
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 33 0.81
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 33 0.81
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 33 0.81
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 33 0.81
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 33 0.81
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 31 2.5
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 31 2.5
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 31 2.5
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 31 2.5
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 31 2.5
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 31 2.5
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 31 2.5
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 31 2.5
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 31 2.5
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 31 2.5
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 31 2.5
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 4.3
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 4.3
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 4.3
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 31 4.3
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 4.3
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 31 4.3
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 30 7.5
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 30 7.5
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 30 7.5
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 30 7.5
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 30 7.5
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 68 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 127
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 128 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 185
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 186 RDGTGVVEF 194
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 33 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 69
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 105 bits (251), Expect = 2e-22
Identities = 57/129 (44%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G + +DLKNR+G PPFAFVEFEDP LRVEF
Sbjct: 36 FYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGT 95
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
E RV+V+GLPPSGSWQDLKDHMR AGDVC+A +
Sbjct: 96 GRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY 153
Query: 591 KDGSGVVEF 617
+DG+GVVEF
Sbjct: 154 RDGTGVVEF 162
Score = 55.2 bits (127), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = +2
Query: 140 MSGGS----SXNRNECRIYVGNLPPDIRTKDIQDLFY 238
MSGG N+CRIYVGNLPPDIRTKDI+D+FY
Sbjct: 1 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFY 37
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 90.2 bits (214), Expect = 5e-18
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 90.2 bits (214), Expect = 5e-18
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 90.2 bits (214), Expect = 5e-18
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 90.2 bits (214), Expect = 5e-18
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 90.2 bits (214), Expect = 5e-18
Identities = 53/129 (41%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKG-PPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXX 410
F +G++ ++LKNR G PFAFV FEDP LRVEF
Sbjct: 34 FYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGR 93
Query: 411 XXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTF 590
++RVLV+GLPPSGSWQDLKDHMR AGDVC+A
Sbjct: 94 GGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ 143
Query: 591 KDGSGVVEF 617
KDG G+VE+
Sbjct: 144 KDGVGMVEY 152
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 176 RIYVGNLPPDIRTKDIQDLFY 238
RIYVGNLP D+R KD++DLFY
Sbjct: 15 RIYVGNLPTDVREKDLEDLFY 35
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 52.4 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Frame = +3
Query: 213 QRIFKTCFTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFX 392
+R + F +GK+ VDLKN G FVEF+D + VE
Sbjct: 15 ERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPPSGSWQDLKDHMRXAGDV 572
EYR++V L SWQDLKD+MR AG+V
Sbjct: 71 RGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEV 130
Query: 573 CFAXTFK--DGSGVVEF 617
+A K GV+EF
Sbjct: 131 TYADAHKGRKNEGVIEF 147
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 153
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFK--DGSGVVEF 617
EYR++V L SWQDLKD+MR AG+V +A K GV+EF
Sbjct: 28 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEF 72
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 47.6 bits (108), Expect = 4e-05
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 489 EYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXTFKD--GSGVVEF 617
EYR++V L SWQDLKD MR AG+V +A K+ GV+EF
Sbjct: 143 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEF 187
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 46.8 bits (106), Expect = 6e-05
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F +G++ +DLK +G F FVEFEDP + +E
Sbjct: 24 FKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGG 79
Query: 414 XXXXXXXXXXXXXXXXXXXXXX--XXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
E R++V L SWQDLKD MR AG+V FA
Sbjct: 80 RGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 139
Query: 588 F--KDGSGVVEF 617
K GVVEF
Sbjct: 140 HRPKLNEGVVEF 151
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 46.8 bits (106), Expect = 6e-05
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F +G++ +DLK +G F FVEFEDP + +E
Sbjct: 24 FKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGG 79
Query: 414 XXXXXXXXXXXXXXXXXXXXXX--XXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
E R++V L SWQDLKD MR AG+V FA
Sbjct: 80 RGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 139
Query: 588 F--KDGSGVVEF 617
K GVVEF
Sbjct: 140 HRPKLNEGVVEF 151
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 46.8 bits (106), Expect = 6e-05
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F +G++ +DLK +G F FVEFEDP + +E
Sbjct: 24 FKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGG 79
Query: 414 XXXXXXXXXXXXXXXXXXXXXX--XXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
E R++V L SWQDLKD MR AG+V FA
Sbjct: 80 RGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 139
Query: 588 F--KDGSGVVEF 617
K GVVEF
Sbjct: 140 HRPKLNEGVVEF 151
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 46.8 bits (106), Expect = 6e-05
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Frame = +3
Query: 234 FTTFGKVTFVDLKNRKGPPFAFVEFEDPXXXXXXXXXXXXXXXXXXXLRVEFXXXXXXXX 413
F +G++ +DLK +G F FVEFEDP + +E
Sbjct: 24 FKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGG 79
Query: 414 XXXXXXXXXXXXXXXXXXXXXX--XXXEYRVLVTGLPPSGSWQDLKDHMRXAGDVCFAXT 587
E R++V L SWQDLKD MR AG+V FA
Sbjct: 80 RGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADA 139
Query: 588 F--KDGSGVVEF 617
K GVVEF
Sbjct: 140 HRPKLNEGVVEF 151
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 34.7 bits (76), Expect = 0.26
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G GVVEF
Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 148
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.26
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G GVVEF
Sbjct: 48 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 95
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 34.7 bits (76), Expect = 0.26
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +3
Query: 495 RVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKD------GSGVVEF 617
RV ++ +P WQ +KD MR G+V + FKD G GVVEF
Sbjct: 121 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEF 168
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 38 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 66
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 33.1 bits (72), Expect = 0.81
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI +D + LF
Sbjct: 74 GEKTYTQRCRLFVGNLPTDITEEDFKRLF 102
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLFYNVRKS 253
G R++VGNLPPDI ++++ LF K+
Sbjct: 66 GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKA 100
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI + + LF
Sbjct: 216 GEKTYTQRCRLFVGNLPADITEDEFKRLF 244
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 149 GSSXNRNECRIYVGNLPPDIRTKDIQDLF 235
G CR++VGNLP DI + + LF
Sbjct: 289 GEKTYTQRCRLFVGNLPADITEDEFKRLF 317
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 30.7 bits (66), Expect = 4.3
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 534 QDLKDHMRXAGDVCFAXTF--KDGSGVVEF 617
+DLKD MR AG+V FA K GVVEF
Sbjct: 176 KDLKDFMRQAGEVTFADAHRPKLNEGVVEF 205
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKDGSG 605
YR +T +P WQ LKD ++ G+V + D G
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 109
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKDGSG 605
YR +T +P WQ LKD ++ G+V + D G
Sbjct: 70 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 108
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKDGSG 605
YR +T +P WQ LKD ++ G+V + D G
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 109
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKDGSG 605
YR +T +P WQ LKD ++ G+V + D G
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 109
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 492 YRVLVTGLPPSGSWQDLKDHMR-XAGDVCFAXTFKDGSG 605
YR +T +P WQ LKD ++ G+V + D G
Sbjct: 71 YRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEG 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,154,093
Number of Sequences: 237096
Number of extensions: 1180290
Number of successful extensions: 2573
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2566
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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