Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B22
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 229 4e-61
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 135 5e-33
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 131 7e-32
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 130 2e-31
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 113 2e-26
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 103 3e-23
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 99 5e-22
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 90 3e-19
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 2e-05
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 28 1.0
SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|ch... 27 1.8
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.5
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 26 5.5
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 25 9.5
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 229 bits (559), Expect = 4e-61
Identities = 106/187 (56%), Positives = 139/187 (74%)
Frame = +2
Query: 92 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 271
Q P+ V++ N R+ G K Q+ NI A K +ADVIRTCLGP+AMLKML+DP+G +++TNDG
Sbjct: 2 QSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDG 61
Query: 272 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 451
+AILREI V HPAAKSMIE+ARTQDEEVGDGTTSVI+LAGE+LA A P L + IHP V+I
Sbjct: 62 HAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMI 121
Query: 452 REYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNT 631
R ++QALEDA+ ++ D+I++PV+++D M +IR+C+GTK + RW T
Sbjct: 122 RSFKQALEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRT 180
Query: 632 VTVNDNG 652
V NG
Sbjct: 181 VASTSNG 187
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 135 bits (327), Expect = 5e-33
Identities = 65/160 (40%), Positives = 104/160 (65%)
Frame = +2
Query: 92 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 271
Q P++VL + T GR L NI+A + D IRT LGP K+++D G +V++NDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 272 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 451
I++ + + HPAAK++++IAR QD EVGDGTTSV+V AGE+L A F+ + +II
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 452 REYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGT 571
R YR+A + A+ +++ I++ +DL+D +++++ C T
Sbjct: 127 RGYRKAAQLAVNKIKE-IAIHLDLSDEGKLRDLLTKCAST 165
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 131 bits (317), Expect = 7e-32
Identities = 60/154 (38%), Positives = 101/154 (65%)
Frame = +2
Query: 128 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 307
RE ++V+L NI A +++AD IRT LGP+ M KM+ G +++TNDG IL+ ++V HP
Sbjct: 14 REKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP 73
Query: 308 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 487
AAK +++++ QD E GDGTTSV++LAG MLA AE L + IHPTVI +++A +
Sbjct: 74 AAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVD 133
Query: 488 LLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGRW 589
+++ ++ ++L+D + + + +K + ++
Sbjct: 134 CMKEN-ALAIELSDRESLLRAATTSLNSKIVSQY 166
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 130 bits (313), Expect = 2e-31
Identities = 62/150 (41%), Positives = 96/150 (64%)
Frame = +2
Query: 134 SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAA 313
SG V+ +N+ A IA+V+++ LGP + KML+D +G + +TNDG IL + V+HPA
Sbjct: 18 SGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAG 77
Query: 314 KSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLL 493
K ++E+A+ QD+EVGDGTTSV+++A E+L A + IHPT II YR A+ +A+ +
Sbjct: 78 KVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFM 137
Query: 494 QDKISVPVDLNDXXXMKEVIRSCVGTKYIG 583
D +S VD + V ++ + +K IG
Sbjct: 138 TDVLSCSVDSLGKESLINVAKTSMSSKIIG 167
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 113 bits (273), Expect = 2e-26
Identities = 62/147 (42%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +2
Query: 89 GQQPILVLSQNTKRE-SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTN 265
G ILV Q KR G +I A KT+A+++RT LGP+ + K+L+ P G I +TN
Sbjct: 15 GNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTN 74
Query: 266 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 445
DG IL ++ V+H AK +++++++QD+E+GDGTT V+VLAG +L AE + + IHP
Sbjct: 75 DGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIR 134
Query: 446 IIREYRQALEDAIVLLQDKISVPVDLN 526
I Y +A + A+ L D IS VD +
Sbjct: 135 IADGYEKACQVAVKHL-DAISDVVDFS 160
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 103 bits (246), Expect = 3e-23
Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM-DPMGGIVMTNDGN 274
P + +++ +E G +L + + D++++ LGP+ M K+L + G IV+TNDG
Sbjct: 5 PHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGA 64
Query: 275 AILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIR 454
IL+ I + + AAK ++ I++ QD+EVGDGTTSV V A E+L AE + IHP VII
Sbjct: 65 TILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIID 124
Query: 455 EYRQALEDAIVLLQ 496
YR A + AI L+
Sbjct: 125 GYRIATKTAIDALR 138
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 99.1 bits (236), Expect = 5e-22
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Frame = +2
Query: 119 NTKRESGRKVQL--ENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 292
N K ES ++ Q NISA + DV+++ LGP KML+D G I +T DG +L E+
Sbjct: 6 NPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEM 65
Query: 293 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 472
+Q+P A + + A QD+ GDGTTSV +L GE+L AE ++ + +HP++I + A
Sbjct: 66 QIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAK 125
Query: 473 EDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTK 574
+A+ L D ++ D + V ++ + TK
Sbjct: 126 NEALTFL-DSFKTDFEV-DREVLLNVAKTSLSTK 157
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 89.8 bits (213), Expect = 3e-19
Identities = 43/145 (29%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Frame = +2
Query: 152 LENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEI 331
+ N +A + ++++ RT LGP K++++ + +TND I+RE+ V HPAAK +++
Sbjct: 29 IRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDA 88
Query: 332 ARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISV 511
+ Q+ E+GD V+V GE+LA AE + + P I + Y AL + +L++ +
Sbjct: 89 TQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD 148
Query: 512 PVD-LNDXXXMKEVIRSCVGTKYIG 583
++ + + + IR+C+ +K G
Sbjct: 149 KIETVESEKELIKAIRTCISSKQYG 173
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +2
Query: 176 TIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKSMIEIARTQ 343
T+A + LGP+ ++ P G +T DG + R +++ ++ A+ + ++A
Sbjct: 53 TLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKT 112
Query: 344 DEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQ 496
+E GDGTT+ VL + + + +P + R + A+++ + LQ
Sbjct: 113 NEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQ 163
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 28.3 bits (60), Expect = 1.0
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +1
Query: 223 KNVNGPY---GRHRDDQRW*CYTQGNHSPTSSCKIYDRNRKDPR*RGWRWNHISHSASRR 393
KN NG Y R D+ W T+ PTS + +K P + WN + A
Sbjct: 421 KNENGIYDKKARSVSDEAWSFITKCLTEPTSRFQSTIEIQKHPFFKRLHWNGLRKRAVPP 480
Query: 394 NVGDCRTLLDTEYSSNSHHQRIPPSFR 474
V LDT Y + + +++ +++
Sbjct: 481 FVPRLENQLDTSYFDDFNDEQVLDAYK 507
>SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -2
Query: 163 NIFKLNFPAGLTFCILAEN*YRLLSIHFEKIKCVLIIKLQK 41
N KL F L C L Y SIH IK +L KLQK
Sbjct: 113 NCNKLQFQISLLRCCLRIVPYSAESIHGRIIKLLLYTKLQK 153
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 433 SSNSHHQRIPPSFRGCHSAASRQNFSACRF 522
S ++ +PP+F HS R++F C F
Sbjct: 241 SKSTPDNSLPPNFINNHSNVFRRSFHTCNF 270
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 239 PMGGIVMTNDGNAILREITVQHPAAKSMI 325
P GGI+ ++ NA + QHP A ++
Sbjct: 16 PAGGIMSVSNSNADTNQGVTQHPLANRIV 44
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -1
Query: 272 YHRWSSRC---LP*GPLTFLTWPEVQGMFL*HRLWSFLH*YFQAELSGRTHVLYFG*EL 105
YH S C L GP T WPE+ G + +R + L +L+G + Y+G E+
Sbjct: 236 YHVIKSDCEAELAGGPAT---WPEIFGPDIRYRTFLGLGVMSLQQLTGDNYYFYYGFEV 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,753
Number of Sequences: 5004
Number of extensions: 56365
Number of successful extensions: 149
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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