Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B22
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 248 2e-66
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 139 1e-33
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 139 1e-33
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 128 3e-30
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 128 3e-30
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 125 3e-29
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 125 3e-29
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 121 5e-28
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 121 5e-28
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 120 9e-28
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 120 9e-28
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 120 9e-28
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 102 2e-22
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 102 2e-22
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 87 8e-18
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 44 9e-05
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 41 9e-04
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 5.0
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z72517-1|CAA96691.1| 285|Caenorhabditis elegans Hypothetical pr... 27 8.8
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 27 8.8
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 8.8
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 8.8
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 8.8
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 248 bits (608), Expect = 2e-66
Identities = 122/188 (64%), Positives = 145/188 (77%)
Frame = +2
Query: 89 GQQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTND 268
GQQPI+VLSQ TKRESG +VQ+ NI+A KTIADVIRT LGP+AMLKMLMDPMGGIVMTND
Sbjct: 5 GQQPIIVLSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTND 64
Query: 269 GNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVI 448
GNAILREITV+HPAAKSMIEIARTQDEE GDGTTSVI+LAGE++A A+ +L Q HPT+I
Sbjct: 65 GNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLI 124
Query: 449 IREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGRWXXXXXXXXXXXXN 628
I+ YRQALED I ++K S VD+ D + +V++SC+GTK I +W
Sbjct: 125 IKAYRQALEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVK 184
Query: 629 TVTVNDNG 652
T+ V G
Sbjct: 185 TIRVEKAG 192
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 139 bits (337), Expect = 1e-33
Identities = 65/182 (35%), Positives = 111/182 (60%)
Frame = +2
Query: 107 VLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILR 286
+L+ KR +G+ ++ +N++A IA+++++ LGP + KML+D +G +++TNDG IL+
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 287 EITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQ 466
++ V+HPA K ++E+A+ QDEEVGDGTTSV+++A E+L A+ + Q +HPT II YR
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 467 ALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVND 646
A ++A+ + + IS D + ++ + +K IG V V +
Sbjct: 128 ACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN 187
Query: 647 NG 652
NG
Sbjct: 188 NG 189
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 139 bits (337), Expect = 1e-33
Identities = 65/182 (35%), Positives = 111/182 (60%)
Frame = +2
Query: 107 VLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILR 286
+L+ KR +G+ ++ +N++A IA+++++ LGP + KML+D +G +++TNDG IL+
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 287 EITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQ 466
++ V+HPA K ++E+A+ QDEEVGDGTTSV+++A E+L A+ + Q +HPT II YR
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 467 ALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVND 646
A ++A+ + + IS D + ++ + +K IG V V +
Sbjct: 128 ACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVEN 187
Query: 647 NG 652
NG
Sbjct: 188 NG 189
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 128 bits (309), Expect = 3e-30
Identities = 61/158 (38%), Positives = 100/158 (63%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNA 277
PI++L T+ + G+ + NI+A + +AD IRT LGP+ + K+++D G ++NDG
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGAT 64
Query: 278 ILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIRE 457
IL+ + + PAA +M++IAR+QD EVGDGTTSV+VLA E+L +PF+ +HP ++IR
Sbjct: 65 ILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRA 124
Query: 458 YRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGT 571
+A E + L D + + +N ++E++ C T
Sbjct: 125 IGKACEKTLKNLAD---LEIKINGETELREMLVKCAAT 159
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 128 bits (309), Expect = 3e-30
Identities = 61/158 (38%), Positives = 100/158 (63%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNA 277
PI++L T+ + G+ + NI+A + +AD IRT LGP+ + K+++D G ++NDG
Sbjct: 5 PIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGAT 64
Query: 278 ILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIRE 457
IL+ + + PAA +M++IAR+QD EVGDGTTSV+VLA E+L +PF+ +HP ++IR
Sbjct: 65 ILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRA 124
Query: 458 YRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGT 571
+A E + L D + + +N ++E++ C T
Sbjct: 125 IGKACEKTLKNLAD---LEIKINGETELREMLVKCAAT 159
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 125 bits (301), Expect = 3e-29
Identities = 58/153 (37%), Positives = 98/153 (64%)
Frame = +2
Query: 128 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 307
++ V+ NI A K +AD +RT LGP+ M KM+ G + +TNDG IL +++V HP
Sbjct: 26 KDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHP 85
Query: 308 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 487
AK ++E+++ QD E GDGTT+V+V+AG +L A+ L++ IHPT I ++ A +A
Sbjct: 86 TAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK 145
Query: 488 LLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
+L D++S PVDL++ + ++ + + +K + +
Sbjct: 146 IL-DEMSSPVDLSNDALLNKMATTSLNSKVVSQ 177
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 125 bits (301), Expect = 3e-29
Identities = 58/153 (37%), Positives = 98/153 (64%)
Frame = +2
Query: 128 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 307
++ V+ NI A K +AD +RT LGP+ M KM+ G + +TNDG IL +++V HP
Sbjct: 26 KDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHP 85
Query: 308 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 487
AK ++E+++ QD E GDGTT+V+V+AG +L A+ L++ IHPT I ++ A +A
Sbjct: 86 TAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEK 145
Query: 488 LLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
+L D++S PVDL++ + ++ + + +K + +
Sbjct: 146 IL-DEMSSPVDLSNDALLNKMATTSLNSKVVSQ 177
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 121 bits (291), Expect = 5e-28
Identities = 62/166 (37%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 QPILVL--SQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTND 268
QP +V+ +N KR +G + +I A + +A+ +RT LGP+ + KML+ P G + +TND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 269 GNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVI 448
G I+ ++ VQH AK M+E++++QD E+GDGTT V+VLAG +L AE + + IHP I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 449 IREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
+ A + A+ L D IS + + + E ++ +G+K + R
Sbjct: 135 ADGFDLACKKALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 121 bits (291), Expect = 5e-28
Identities = 62/166 (37%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 QPILVL--SQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTND 268
QP +V+ +N KR +G + +I A + +A+ +RT LGP+ + KML+ P G + +TND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 269 GNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVI 448
G I+ ++ VQH AK M+E++++QD E+GDGTT V+VLAG +L AE + + IHP I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 449 IREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
+ A + A+ L D IS + + + E ++ +G+K + R
Sbjct: 135 ADGFDLACKKALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 121 bits (291), Expect = 5e-28
Identities = 62/166 (37%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 QPILVL--SQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTND 268
QP +V+ +N KR +G + +I A + +A+ +RT LGP+ + KML+ P G + +TND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 269 GNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVI 448
G I+ ++ VQH AK M+E++++QD E+GDGTT V+VLAG +L AE + + IHP I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 449 IREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
+ A + A+ L D IS + + + E ++ +G+K + R
Sbjct: 135 ADGFDLACKKALETL-DSISDKFPVENRERLVETAQTSLGSKIVNR 179
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 120 bits (289), Expect = 9e-28
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM----DPMGGIVMTN 265
P+ +L N + E G +L + I D++++ LGP+ M K+L+ + GGI +TN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 266 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 445
DG IL+ I V +PAAK +++++ TQD EVGDGTTSV VLA E+L AE + Q IHP
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 446 IIREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
II YR+AL A L+ K S+ N + ++ R+ +G+K + +
Sbjct: 123 IISGYRRALGIAQESLK-KSSIESGDNIRDDLLKIARTTLGSKILSQ 168
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 120 bits (289), Expect = 9e-28
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM----DPMGGIVMTN 265
P+ +L N + E G +L + I D++++ LGP+ M K+L+ + GGI +TN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 266 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 445
DG IL+ I V +PAAK +++++ TQD EVGDGTTSV VLA E+L AE + Q IHP
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 446 IIREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
II YR+AL A L+ K S+ N + ++ R+ +G+K + +
Sbjct: 123 IISGYRRALGIAQESLK-KSSIESGDNIRDDLLKIARTTLGSKILSQ 168
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 120 bits (289), Expect = 9e-28
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Frame = +2
Query: 98 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM----DPMGGIVMTN 265
P+ +L N + E G +L + I D++++ LGP+ M K+L+ + GGI +TN
Sbjct: 3 PVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTN 62
Query: 266 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 445
DG IL+ I V +PAAK +++++ TQD EVGDGTTSV VLA E+L AE + Q IHP
Sbjct: 63 DGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQT 122
Query: 446 IIREYRQALEDAIVLLQDKISVPVDLNDXXXMKEVIRSCVGTKYIGR 586
II YR+AL A L+ K S+ N + ++ R+ +G+K + +
Sbjct: 123 IISGYRRALGIAQESLK-KSSIESGDNIRDDLLKIARTTLGSKILSQ 168
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 102 bits (245), Expect = 2e-22
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +2
Query: 119 NTKRESGRKVQ-LE-NISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 292
N K E R LE NIS + + DV+R+ LGP+ LKML+ G I +T DGN +L E+
Sbjct: 8 NPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEM 67
Query: 293 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 472
+QHP A + + + QD+ GDGTTS ++L GE+L AE + + +HP ++ + A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 473 EDAIVLLQD-KISVPVDLNDXXXMKEVIRSCVGTK 574
+ LL+ K PV+ + + EV R+ + TK
Sbjct: 128 TKTLELLEKFKKEAPVERD---LLVEVCRTALRTK 159
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 102 bits (245), Expect = 2e-22
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +2
Query: 119 NTKRESGRKVQ-LE-NISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 292
N K E R LE NIS + + DV+R+ LGP+ LKML+ G I +T DGN +L E+
Sbjct: 8 NPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEM 67
Query: 293 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 472
+QHP A + + + QD+ GDGTTS ++L GE+L AE + + +HP ++ + A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 473 EDAIVLLQD-KISVPVDLNDXXXMKEVIRSCVGTK 574
+ LL+ K PV+ + + EV R+ + TK
Sbjct: 128 TKTLELLEKFKKEAPVERD---LLVEVCRTALRTK 159
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 87.4 bits (207), Expect = 8e-18
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = +2
Query: 158 NISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIAR 337
NI A +A IR+ GP M KM+++ + + +TND IL+E+ +QHPAA+ +I
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATE 90
Query: 338 TQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQD-KISVP 514
Q++++GD T +V++LA +L A + + P + Y QA E A+ +L +
Sbjct: 91 MQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEA 150
Query: 515 VDLNDXXXMKEVIRSCVGTK 574
D+ + +++ IRS + +K
Sbjct: 151 TDMKNIEEVRQYIRSAITSK 170
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 44.0 bits (99), Expect = 9e-05
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Frame = +2
Query: 137 GRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QH 304
GR+ L ++ +AD + +GP+ ++ G +T DG + + I + Q+
Sbjct: 27 GRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQN 83
Query: 305 PAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAI 484
AK + ++A +EE GDGTT VLA + + Q + I R A+E +
Sbjct: 84 LGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVEVVV 143
Query: 485 VLLQDKISVPV 517
L+ KIS V
Sbjct: 144 AELK-KISKKV 153
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 137 GRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QH 304
GR+ L ++ +AD + +GP+ ++ G +T DG + + I + Q+
Sbjct: 27 GRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQN 83
Query: 305 PAAKSMIEIARTQDEEVGDGTTSVIVL 385
AK + ++A +EE GDGTT VL
Sbjct: 84 LGAKLIQDVANKANEEAGDGTTCATVL 110
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 125 KRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMD--PMGGIVMTNDGNAILREI-T 295
K++S + +Q+E + ++ + C+G +L +D P G ++ N +AI +I T
Sbjct: 564 KKDSSKNLQIEESCSDYLVSMLANCCIGEPDLLAATIDFLPYLGKLLVNGSDAIALKIKT 623
Query: 296 VQHPAA 313
+ H +A
Sbjct: 624 ILHFSA 629
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 125 KRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMD--PMGGIVMTNDGNAILREI-T 295
K++S + +Q+E + ++ + C+G +L +D P G ++ N +AI +I T
Sbjct: 564 KKDSSKNLQIEESCSDYLVSMLANCCIGEPDLLAATIDFLPYLGKLLVNGSDAIALKIKT 623
Query: 296 VQHPAA 313
+ H +A
Sbjct: 624 ILHFSA 629
>Z72517-1|CAA96691.1| 285|Caenorhabditis elegans Hypothetical
protein T28F4.1 protein.
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 405 IANISPASTMTDVVPSPTSSSWVLAISIIDFAAG 304
++N+ P TD++P P S ++ +D A G
Sbjct: 224 LSNVGPEPIFTDIIPEPLSHEDTHELTDLDVATG 257
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 295 SPTSSCKIYDRNRKDPR*RGWRWNHISHSASRRNVGDCRTLLDTEYSSNSHHQR 456
SP SS Y + +DP R R+N + HS R+ D + D + HHQ+
Sbjct: 23 SPPSSRSEYQMSIRDPIIRRNRYNTMEHS---RSSHDPQYHQDQQQQQQPHHQQ 73
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 295 SPTSSCKIYDRNRKDPR*RGWRWNHISHSASRRNVGDCRTLLDTEYSSNSHHQR 456
SP SS Y + +DP R R+N + HS R+ D + D + HHQ+
Sbjct: 1663 SPPSSRSEYQMSIRDPIIRRNRYNTMEHS---RSSHDPQYHQDQQQQQQPHHQQ 1713
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 295 SPTSSCKIYDRNRKDPR*RGWRWNHISHSASRRNVGDCRTLLDTEYSSNSHHQR 456
SP SS Y + +DP R R+N + HS R+ D + D + HHQ+
Sbjct: 1764 SPPSSRSEYQMSIRDPIIRRNRYNTMEHS---RSSHDPQYHQDQQQQQQPHHQQ 1814
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 295 SPTSSCKIYDRNRKDPR*RGWRWNHISHSASRRNVGDCRTLLDTEYSSNSHHQR 456
SP SS Y + +DP R R+N + HS R+ D + D + HHQ+
Sbjct: 1764 SPPSSRSEYQMSIRDPIIRRNRYNTMEHS---RSSHDPQYHQDQQQQQQPHHQQ 1814
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,727,740
Number of Sequences: 27780
Number of extensions: 322036
Number of successful extensions: 783
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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