Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B21
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 207 2e-52
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 137 2e-31
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 136 3e-31
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 133 3e-30
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 133 3e-30
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 126 6e-28
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 120 3e-26
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 113 3e-24
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 110 2e-23
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 101 2e-20
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 97 3e-19
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 93 5e-18
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 85 1e-15
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 85 1e-15
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 83 6e-15
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 58 2e-07
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 46 8e-04
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.007
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.017
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.017
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.039
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.039
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.052
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.069
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.12
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 1.5
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 35 2.0
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 3.4
UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like; n... 34 3.4
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 6.0
UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n... 33 6.0
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 7.9
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 207 bits (505), Expect = 2e-52
Identities = 107/179 (59%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = +1
Query: 121 FNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAG 300
FNQPAR+ RR++ +RPIVRCPTVRYHTKVRAGRGF+L E+R AG
Sbjct: 26 FNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAG 85
Query: 301 LNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEXXRK 477
++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ K
Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELK 145
Query: 478 LATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAKRLXDAAE 654
LATQL GP+MPV+ K AR ITE EKNFKA+ LR AR+ A+L GIRAKR +AAE
Sbjct: 146 LATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE 204
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 137 bits (331), Expect = 2e-31
Identities = 74/182 (40%), Positives = 104/182 (57%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+K+ F+QP + RR+ LRP VRCPT+RY+TK+R+GRGFT+ E+
Sbjct: 22 VKVWFDQPGAKKRRR-TAREAKAAKLGLRPVQLLRPAVRCPTLRYNTKIRSGRGFTIEEV 80
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEX 468
+AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+ARL++ PK K K + +
Sbjct: 81 KAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDL 140
Query: 469 XRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAKRLXDA 648
A + ++P+ R IT EK F AY+ LR AR + G R+
Sbjct: 141 SNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNAYETLRKARGTHRAAGKVKARIAKK 200
Query: 649 AE 654
E
Sbjct: 201 EE 202
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 136 bits (330), Expect = 3e-31
Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Frame = +1
Query: 100 KDLLKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTL 279
++ +K FNQPAR+ RR+ LRP+V T++Y+ KVRAG+GFTL
Sbjct: 17 QNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTL 76
Query: 280 REIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGE 456
E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L++FP + ++V G+
Sbjct: 77 EELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGD 136
Query: 457 ANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAKR 636
+ ATQ++G MP+ +T K FKAY +R R+ A+ G RAKR
Sbjct: 137 STPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGARAKR 196
Query: 637 LXDA 648
+A
Sbjct: 197 AAEA 200
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 133 bits (322), Expect = 3e-30
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Frame = +1
Query: 100 KDLLKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTL 279
K +K+ FNQPA++ RR++ + LRP V CPTVRY+ K R GRGF+L
Sbjct: 35 KGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSL 93
Query: 280 REIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGE 456
E++AAG+ P +ARTIGI VD RR+NKS E + INVQR+K Y ++L+LFP KK KG+
Sbjct: 94 EELKAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGD 153
Query: 457 ANEXXRKLATQLR-----GPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVG 621
A E K ATQ R + + PA + R +TE E K Y++L+ S +
Sbjct: 154 ATEEEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFR 212
Query: 622 IRAKR 636
R +R
Sbjct: 213 ARNRR 217
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 133 bits (322), Expect = 3e-30
Identities = 76/185 (41%), Positives = 113/185 (61%)
Frame = +1
Query: 100 KDLLKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTL 279
++ +++ F+Q ++ R+Q+ + LRP+VR PTV+Y+ KVRAGRGFTL
Sbjct: 19 QERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRGFTL 77
Query: 280 REIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA 459
E++A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++F K K + +
Sbjct: 78 AELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVAS 137
Query: 460 NEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAKRL 639
E AT PV+QPAP+S R + E+ AY+ LR AR+ K GIR KR
Sbjct: 138 FEQVDVSAT------FPVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKYKGIREKRA 189
Query: 640 XDAAE 654
+ AE
Sbjct: 190 KEKAE 194
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 126 bits (303), Expect = 6e-28
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 1/183 (0%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+KL FNQP ++ RRK LRP+V CP+ RY +KVRAGRGFT +E+
Sbjct: 21 VKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPSERYKSKVRAGRGFTFQEL 79
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-KVLKGEANE 465
+ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY++RLI P K KVLK + +
Sbjct: 80 KQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGK 139
Query: 466 XXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAKRLXD 645
L V+ K A + E EK F+A+ LR AR K GIR KR
Sbjct: 140 N-----------LNVVKVVPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIRMKRKLK 188
Query: 646 AAE 654
+E
Sbjct: 189 KSE 191
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 120 bits (289), Expect = 3e-26
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 20/202 (9%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+++ F+QP R++RR++ + LRP+VRCPTV+Y+ +VR GRGFTL E+
Sbjct: 39 VRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVGRGFTLAEL 97
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK---KVLKGEA 459
+ AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+ K L A
Sbjct: 98 KEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPRKSGQFKKLDSSA 157
Query: 460 NEXXRKLA-----------TQLRGPLMPVQQPAPKSVARPITEXEKN------FKAYQYL 588
+E A T G + P++ S A +TE +++ AY+ L
Sbjct: 158 DEVNAAKAAFAAEGKTEGYTTKLGAIFPIKN---ISAAEAVTEVKRDELPKGEEAAYRRL 214
Query: 589 RGARSIAKLVGIRAKRLXDAAE 654
R RS A+ GIR KR AE
Sbjct: 215 RETRSEARYKGIREKRAKAKAE 236
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 113 bits (272), Expect = 3e-24
Identities = 70/177 (39%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+K NQ ++ RR+ LRP+V P+ RY+ K+R GRGFTL+E+
Sbjct: 21 VKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHMPSRRYNYKLRFGRGFTLQEL 79
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA--- 459
+ AGL AR++G+AVD RR NK ESL +NV R+K Y ++L+LFP+ K KG A
Sbjct: 80 KVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLP 139
Query: 460 ----NEXXRKLA--TQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAK 612
E R LA Q +MPV Q K R +TE + + Y LR AR AK
Sbjct: 140 SDTPREKLRTLALTKQSVKKVMPVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 110 bits (265), Expect = 2e-23
Identities = 69/182 (37%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+K +NQPA + RR+Q LRP+VR T++Y++ + GRGF+L E+
Sbjct: 20 VKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTIKYNSVQKLGRGFSLIEL 78
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK--GKK---VLKG 453
+ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++L+L+P+ GK V+K
Sbjct: 79 KEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKD 138
Query: 454 EANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFK-AYQYLRGARSIAKLVGIRA 630
NE Q P + Q PK + E K Y+ LR AK VG++
Sbjct: 139 STNEVVAHPVAQNTNPEVLTFQRTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGVKE 198
Query: 631 KR 636
KR
Sbjct: 199 KR 200
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 101 bits (241), Expect = 2e-20
Identities = 70/192 (36%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Frame = +1
Query: 100 KDLLKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTL 279
K +K +NQP R+ R+ LRPIV PT RY+ K R GRGFTL
Sbjct: 17 KRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRGFTL 75
Query: 280 REIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKG- 453
E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++L P KGKK KG
Sbjct: 76 EELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGF 135
Query: 454 ------EANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKL 615
A E + L P++ IT E+ F+A+ LR AK
Sbjct: 136 AGIPNDSAREEFKALKNVSHEKAFPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIEAKN 195
Query: 616 VGIRAKRLXDAA 651
G +A + +A
Sbjct: 196 FGKKATKAKASA 207
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 97.1 bits (231), Expect = 3e-19
Identities = 51/112 (45%), Positives = 66/112 (58%)
Frame = +1
Query: 109 LKLAFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 288
+K F+ PAR RR+ LRPIVRCPTVRY+ K R GRGFT +E+
Sbjct: 42 VKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRGFTPKEL 101
Query: 289 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 444
AAG +P AR GIAVD RR + ++ NV+R++ Y+ARLI KG+ V
Sbjct: 102 VAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGETV 153
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 93.1 bits (221), Expect = 5e-18
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 387
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 388 QRIKEYRARLILFPKGKK 441
+R+ E + I++PK +K
Sbjct: 73 ERVTETNQKDIIYPKREK 90
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 387
L P+V CPT RY+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N
Sbjct: 53 LHPVVHCPTQRYNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENA 112
Query: 388 QRIKEYRARLILFPKGK 438
+R+++Y L++ P K
Sbjct: 113 ERLQKYLNSLVMIPLKK 129
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/107 (42%), Positives = 61/107 (57%)
Frame = +1
Query: 127 QPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLN 306
QP R+ RR Q + L+P V C R++ K+R GRGF+L+E+RAA ++
Sbjct: 26 QPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLGRGFSLKELRAAKID 84
Query: 307 PVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVL 447
ARTIGIAVDPRR+ S E L N QR+ EY RL L K++
Sbjct: 85 KNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKIV 131
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 83.0 bits (196), Expect = 6e-15
Identities = 47/107 (43%), Positives = 63/107 (58%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 387
LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNV 110
Query: 388 QRIKEYRARLILFPKGKKVLKGEANEXXRKLATQLRGPLMPVQQPAP 528
+RIK Y ++ ++ K EA E K T+ +MP +P P
Sbjct: 111 ERIKTYLGKITIYESVK-----EARESGAKPYTK---EIMPFVKPKP 149
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 100 KDLLKLAFNQPARRY-RRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 276
K+L+ FNQP + RRK L+P+V+CPT ++TK++ GRGF+
Sbjct: 17 KNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKIKLGRGFS 76
Query: 277 LREIRAAGLNPVFARTIGIAVDPRRRNKSV 366
++EI+ + + A + GI++D RR+ ++
Sbjct: 77 IQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +1
Query: 214 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQI 381
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 382 NVQRIKEYRARL 417
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +1
Query: 253 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 402
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.007
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = -2
Query: 353 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 186
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.017
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 211 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 378
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +1
Query: 250 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 420
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 378
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 379 INVQRIKE 402
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.039
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 256 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 417
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.052
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 303
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +1
Query: 253 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 405
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 214 PIVRCPTVRYHTKVRAGRGFTLREIR 291
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 208 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 387
L P++R + K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 388 QRIKEY 405
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 337 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEXXRKLATQLRGPLM 507
+D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200
Query: 508 PV 513
PV
Sbjct: 201 PV 202
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 253 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 420
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like;
n=10; Magnoliophyta|Rep: Protein serine/threonine
kinase-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 430 KGKKVLKGEANEXXRKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQY 585
KGK++L+ A E + T P P+P+S+ TE E+N + + Y
Sbjct: 25 KGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSY 76
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 393 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 265
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_A6T0S2 Cluster: Mechanosensitive ion channel protein; n=1;
Janthinobacterium sp. Marseille|Rep: Mechanosensitive
ion channel protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 284
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +1
Query: 268 GFTLREIRA---AGLNPVFART--IGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 432
GF L+++ + +GL + A+T IG + +VE +QI I+ Y RL+L P
Sbjct: 107 GFALKDVLSNLVSGLFILIAQTFEIGDQIVVGETEGTVERIQIRATHIRTYDGRLVLVPN 166
Query: 433 GKKVLKGEANEXXRKL 480
G+ + N +L
Sbjct: 167 GEVFMSRVTNNTASEL 182
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 340 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 462
DP R+ + +S +QR K Y+ ++ + + KK KGEA+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,391,226
Number of Sequences: 1657284
Number of extensions: 12214251
Number of successful extensions: 28602
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28586
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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