Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B19
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 65 4e-11
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 46 2e-05
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 42 3e-04
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 32 0.46
05_03_0411 - 13622241-13622591,13622838-13623476,13624031-136241... 30 1.8
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 30 1.8
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 29 3.2
12_01_0061 + 514798-515967 27 9.8
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 27 9.8
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 9.8
04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203 27 9.8
01_06_1183 - 35176780-35177266,35179631-35181093 27 9.8
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Frame = +3
Query: 234 RETIRKLXTEQISPLVXKMEXEHRI--DDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMM 407
+E++ K E I+P ++ + D + +++ D L G+ P EY G G ++
Sbjct: 39 KESVHKFAQETIAPHAAAIDASNHFPKDVNLWKLMGDFNLHGLTAPEEYGGMGLGYMYHC 98
Query: 408 LVVEELSRVDPAVAAYVDIHNTL-VNSLFMXXXXXXXXXXXXXXXCTEYAGSFCLTEPSS 584
+ +EE+SR +V H+ L +N L E+ G+ ++EP+S
Sbjct: 99 IAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEHVGALAMSEPNS 158
Query: 585 GSDAFALKTVAKKXXXHYIIXG 650
GSD ++K A+K Y+I G
Sbjct: 159 GSDVVSMKCKAEKVDGGYVING 180
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 207 MLTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEYSGSG 386
+LT +E ++R+ +R + ++I+P++ + L G+ G T Y G
Sbjct: 49 LLTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAG-GTIKGYGCPG 107
Query: 387 CNFLTMMLVVEELSRVDPAVAAYVDIHNTLVN-SLFMXXXXXXXXXXXXXXXCTEYAGSF 563
+ + + E++RVD + + ++ +H++L ++ + G +
Sbjct: 108 LSITASAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCW 167
Query: 564 CLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
LTEP+ GSDA +L T A K + I G
Sbjct: 168 ALTEPNHGSDASSLITTATKVPGGWHIDG 196
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 207 MLTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEYSGSG 386
+LTE+E ++ +R+ +++P++ K + + + G+ G T Y G
Sbjct: 60 LLTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIPKMSTLGIAG-GTIKGYGCPG 118
Query: 387 CNFLTMMLVVEELSRVDPAVAAYVDIHNTLVN-SLFMXXXXXXXXXXXXXXXCTEYAGSF 563
+ + E++RVD ++A++ + + L S+ + +
Sbjct: 119 LSGPACAMCFLEIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVY 178
Query: 564 CLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
L+EP+ GSDA +L T A+K +I+ G
Sbjct: 179 ALSEPNHGSDASSLNTTARKVPGGWILNG 207
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 LTEDELAMR--ETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFD 338
L E+ELA R E+IRK ++++ K E + R+++GI+Q LFD
Sbjct: 158 LLEEELARRVEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQ-LFD 201
>05_03_0411 -
13622241-13622591,13622838-13623476,13624031-13624177,
13624364-13624486,13624609-13624784,13625168-13625444
Length = 570
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 90 RRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDEL 227
R ++GNK+ ++W ++ A + ++K Y+TE P D+L
Sbjct: 232 RTILGNKLYQEWFNKRFNAAVFENELKWYATEPYPGKEDYTVADQL 277
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 555 GSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
G + LTEP GSDA +L+T A K + + G
Sbjct: 142 GCWALTEPDYGSDASSLRTAATKVPGGWHLDG 173
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 RFHS--ANANRIKMFPLRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTE 218
RFH NANR+K+ +++ + ++ +EQ + + + AK QM+A + R L E
Sbjct: 200 RFHKNEQNANRLKVLEIQQKLSSEKIEQAK---ISHLAAKEQMEAAKVQREARKL----E 252
Query: 219 DELAMRETIRKL 254
E M ET +L
Sbjct: 253 VEARMYETYNRL 264
>12_01_0061 + 514798-515967
Length = 389
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 63 ANRIKMFPLRRVVGNKILEQWRSQATAAVG-AKTQMKAY 176
+NR ++ LRRV N++L R A AA ++ ++KAY
Sbjct: 14 SNRDGLYSLRRVPANRLLYPSRRAAEAATAKSEEEVKAY 52
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 60 NANRIKMFPLRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRE 239
NANR+K+ +++ + ++ +EQ + + + AK QM+A + R L E E M E
Sbjct: 330 NANRLKVLEIQQKLSSEKIEQTK---ISHLAAKEQMEAAKVQREARKL----EVEARMYE 382
Query: 240 TIRKL 254
T +L
Sbjct: 383 TYNRL 387
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 196 RGVTSVLYAFI*VFAPTAAVAWDL-HCSKILLPTTRRNG 83
RGV ++L P A A+D+ HCS+ L+P ++ NG
Sbjct: 255 RGVPAMLGIMATKRLPYPARAFDMAHCSRCLIPWSKYNG 293
>04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203
Length = 357
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 314 IIDAVFXFHFXHKRTYLFGR*FPYCFPHGEF-IFCQH 207
++++ F F F F FPY +P G+F I C H
Sbjct: 185 VLESGFSFIFSDADIMWFRSPFPYFYPDGDFQIACDH 221
>01_06_1183 - 35176780-35177266,35179631-35181093
Length = 649
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 87 LRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRP 200
L + +G++ E+W + A VG K TPRP
Sbjct: 218 LEQEIGDRASEKWTASMIALVGLLRYAKCVLFSATPRP 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,675,910
Number of Sequences: 37544
Number of extensions: 336375
Number of successful extensions: 899
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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