Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B19
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 142 1e-34
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 133 9e-32
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 113 8e-26
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 101 6e-22
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 99 3e-21
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 81 7e-16
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 81 7e-16
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 61 6e-10
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 54 1e-07
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.004
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 2.9
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 28 5.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.0
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.0
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 5.0
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 142 bits (345), Expect = 1e-34
Identities = 68/180 (37%), Positives = 103/180 (57%)
Frame = +3
Query: 111 ILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLXTEQISPLVXKM 290
I+ RS + A TP P+ +LTE+EL +T+RK + + PLV +M
Sbjct: 15 IISTIRSSYSTATAVSISRHCEDFTGTPPPVNLLTENELFFADTVRKFSKDVVKPLVREM 74
Query: 291 EXEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHN 470
+ ++ + Q +F+NGLMG+ P EY GSG +F M+V+EEL++ DP+V+A V IHN
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHN 134
Query: 471 TLVNSLFMXXXXXXXXXXXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
TL S+ + C++ SFC++E +GSDAFALKT+AK+ H++I G
Sbjct: 135 TLPVSMIIDYGTEEQKLKYLPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISG 194
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 133 bits (322), Expect = 9e-32
Identities = 69/175 (39%), Positives = 99/175 (56%)
Frame = +3
Query: 126 RSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLXTEQISPLVXKMEXEHR 305
RS A T+ +A+ P PL L+E+E ++ T+R+ I PLV +M+ + +
Sbjct: 12 RSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQ 71
Query: 306 IDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNS 485
+ + F+NGLMGIE P +Y G G +F +LV+EEL++VDP+V+ +VD+ NTLV
Sbjct: 72 MHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAP 131
Query: 486 LFMXXXXXXXXXXXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
L + TE GSF L+E SGSDAFALKT AKK ++I G
Sbjct: 132 LIIQLGTEEQKQKYLPKIVTEAIGSFALSETGSGSDAFALKTTAKKDGDDFVISG 186
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 113 bits (273), Expect = 8e-26
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Frame = +3
Query: 126 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLXTEQISPLVXKMEXE 299
R +A+ + + S + PR PL L E+E + E ++ + PLV +M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 300 HRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLV 479
RI+ + + FD LMG++ +Y GSG +F ++L VEELS++DPA+A + + N LV
Sbjct: 66 ARINKQLLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALV 125
Query: 480 NSLFMXXXXXXXXXXXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
L C + G+F L+E SGSDAFA++TVAKK H+I+ G
Sbjct: 126 APLIEEFGNEELKEKYLKKLCKDSVGAFALSEVVSGSDAFAMQTVAKKDGDHFILNG 182
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 101 bits (241), Expect = 6e-22
Identities = 51/106 (48%), Positives = 61/106 (57%)
Frame = +3
Query: 333 FDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXX 512
F+NGLMGIE P +Y G G F LV+EE+S+VD +V A VD+HNTL L +
Sbjct: 16 FENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEK 75
Query: 513 XXXXXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
T GSF L+E SGSDAFALKT AKK Y+I G
Sbjct: 76 QKEKYLPKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDDYVING 121
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/101 (43%), Positives = 63/101 (62%)
Frame = +3
Query: 348 MGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXX 527
MG+ P EY GSG +F M+V+EEL++ DP+V+A V IHNTL S+ +
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 528 XXXXCTEYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
C++ SFC++E +GSDAFALKT+AK+ H++I G
Sbjct: 61 LPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHFLISG 101
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 81.0 bits (191), Expect = 7e-16
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +3
Query: 210 LTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 383
L ++E+A+R++IR+ ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 384 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTL-VNSLFMXXXXXXXXXXXXXXXCTEYAGS 560
G N+ + ++ +EELSR +A H+ L +N + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 561 FCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
++E +GSD ++K A+K Y++ G
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNG 188
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 81.0 bits (191), Expect = 7e-16
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +3
Query: 210 LTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDD--GIRQMLFDNGLMGIETPVEYSGS 383
L ++E+A+R++IR+ ++++P K++ ++ D + L D GL+GI P EY GS
Sbjct: 39 LNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGS 98
Query: 384 GCNFLTMMLVVEELSRVDPAVAAYVDIHNTL-VNSLFMXXXXXXXXXXXXXXXCTEYAGS 560
G N+ + ++ +EELSR +A H+ L +N + E+ G+
Sbjct: 99 GMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKLISGEHMGA 158
Query: 561 FCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
++E +GSD ++K A+K Y++ G
Sbjct: 159 LAMSEAQAGSDVVSMKLRAEKKGDKYVLNG 188
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/152 (25%), Positives = 67/152 (44%)
Frame = +3
Query: 195 RPLTMLTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEY 374
RP L D + E + +++ P + + + + + + + G I ++
Sbjct: 22 RPGVGLERDVEDVLEAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDH 81
Query: 375 SGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXXXXXXCTEYA 554
GSG + L ++ E+LS + AAY+ IHN L +
Sbjct: 82 GGSGLSRLHASVIFEQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKL 141
Query: 555 GSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
GS+CLTEP +GSDA +++T A K +Y++ G
Sbjct: 142 GSYCLTEPDAGSDAASIRTTATKKGDYYVVNG 173
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/147 (20%), Positives = 61/147 (41%)
Frame = +3
Query: 210 LTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 389
LT D+ R +RK +++ P+ + + I + G + + P Y G G
Sbjct: 28 LTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGLGV 87
Query: 390 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXXXXXXCTEYAGSFCL 569
+ ++ ++ EE++ +A + ++ + L + + S+ +
Sbjct: 88 DMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDNPFVASYAV 147
Query: 570 TEPSSGSDAFALKTVAKKXXXHYIIXG 650
TEP +GSD +KT +K YI+ G
Sbjct: 148 TEPGAGSDVAGVKTKCEKKGDEYILNG 174
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Frame = +3
Query: 216 EDELAMRETIRKLXTEQISPLVXKMEXEHRIDDG-IRQMLFDNGLMGIETPVEYSGSGCN 392
E AM+ ++ KL E+I+P V + E R + +ML G+ + PV+Y G+G +
Sbjct: 27 EPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRD 86
Query: 393 FLTMMLVVEELSRVD-PAVAAYVDIHNTL-VNSLFMXXXXXXXXXXXXXXXCTEYAGSFC 566
F + + E++ VD ++ V + + + +L + S
Sbjct: 87 FAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIA 146
Query: 567 LTEPSSGSDAFALKTVAKKXXXHYIIXG 650
++EP +GSD A++T A++ II G
Sbjct: 147 VSEPHAGSDVSAIRTHARRYGSDLIING 174
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Frame = +3
Query: 153 AKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDG-IRQM 329
A T S + R + E M++++ KL E+I+P V K E + R + +M
Sbjct: 40 AVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKM 99
Query: 330 LFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMXXXX 506
L D+G+ G+ P + G+G + + E++ ++ ++ V + +
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGS 159
Query: 507 XXXXXXXXXXXCT-EYAGSFCLTEPSSGSDAFALKTVAKKXXXHYIIXG 650
T + S ++EP +GSD A+ T A++ II G
Sbjct: 160 DALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIING 208
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/147 (23%), Positives = 58/147 (39%)
Frame = +3
Query: 210 LTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 389
L+E + +++ K + + P K + I + GLM + P +Y G G
Sbjct: 31 LSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGM 90
Query: 390 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXXXXXXCTEYAGSFCL 569
L L+VE LS + + + + +++ S+C+
Sbjct: 91 TTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASYCV 150
Query: 570 TEPSSGSDAFALKTVAKKXXXHYIIXG 650
TEP +GSD +KT +K YII G
Sbjct: 151 TEPGAGSDVNGVKTKCEKKGDEYIING 177
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 4/165 (2%)
Frame = +3
Query: 168 KAYSTEVTPRPLTMLTEDELAMRETIRKLXTEQISPL-VXKMEXEHRIDDGIRQMLFDNG 344
KA + +V P PL M E + + + L + V K + I + + G
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELG 109
Query: 345 LMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTL-VNSLFMXXXXXXXXX 521
G+ P E GSG N M V E + D + H ++ + +
Sbjct: 110 TFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQK 169
Query: 522 XXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAK--KXXXHYIIXG 650
+F LTEP++GSDA +++T A+ HY++ G
Sbjct: 170 YLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNG 214
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 4/165 (2%)
Frame = +3
Query: 168 KAYSTEVTPRPLTMLTEDELAMRETIRKLXTEQISPL-VXKMEXEHRIDDGIRQMLFDNG 344
KA + +V P PL M E + + + L + V K + I + + G
Sbjct: 50 KAVTDQVFPYPLNMTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELG 109
Query: 345 LMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTL-VNSLFMXXXXXXXXX 521
G+ P E GSG N M V E + D + H ++ + +
Sbjct: 110 TFGVLVPPELEGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQK 169
Query: 522 XXXXXXCTEYAGSFCLTEPSSGSDAFALKTVAK--KXXXHYIIXG 650
+F LTEP++GSDA +++T A+ HY++ G
Sbjct: 170 YLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVLNG 214
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/147 (22%), Positives = 54/147 (36%)
Frame = +3
Query: 210 LTEDELAMRETIRKLXTEQISPLVXKMEXEHRIDDGIRQMLFDNGLMGIETPVEYSGSGC 389
L++ + ++ K + + P K + I + G M P +Y G G
Sbjct: 25 LSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGPGL 84
Query: 390 NFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXXXXXXCTEYAGSFCL 569
+ L L+VE LS + + + + + S+C+
Sbjct: 85 SNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASYCV 144
Query: 570 TEPSSGSDAFALKTVAKKXXXHYIIXG 650
TEP +GSD +KT A K YII G
Sbjct: 145 TEPGAGSDVNGVKTKAVKQGDEYIING 171
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 126 RSQATAAVGAKTQMKAYSTEVTPR--PLTMLTEDELAMRETIRKLXTEQISPLVXKMEXE 299
R +A+ + + S + PR PL L E+E + E ++ + PLV +M+ +
Sbjct: 6 RKLPISAISTFSTTGSISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRD 65
Query: 300 HRIDDGIRQMLFDNGLMGIE 359
RI+ + + FD LMG++
Sbjct: 66 ARINKQLLKKAFDLKLMGLK 85
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 123 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 239
W + AT T + A T TP+P T L ED ++++E
Sbjct: 206 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 245
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 123 WRSQATAAVGAKTQMKAYSTEVTPRPLTMLTED-ELAMRE 239
W + AT T + A T TP+P T L ED ++++E
Sbjct: 175 WWNAATGTTDKTTSVAAGGTTNTPKPFTFLLEDVNISLKE 214
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 83 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 187
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 379 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 417
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 83 PITTRCWQQDFRTMEVPGNGCRW----SKDSDESIQHRS 187
P + C Q DFR M G C W K +D+++ HR+
Sbjct: 377 PEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRA 415
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/69 (23%), Positives = 26/69 (37%)
Frame = +3
Query: 411 VVEELSRVDPAVAAYVDIHNTLVNSLFMXXXXXXXXXXXXXXXCTEYAGSFCLTEPSSGS 590
+ E L D +A + +H + + E G+FCLTE GS
Sbjct: 88 LTETLEAYDQGTSARLFLHGNVFGAAVKSMGTDRHKDLIQKTENNEIVGAFCLTEVGHGS 147
Query: 591 DAFALKTVA 617
+ ++T A
Sbjct: 148 NTAEIQTTA 156
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 410 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 324
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 410 QHHCQEIAAGTAVFYRSFDAHQPIIKQHL 324
+HH E T V FD H+P++ Q +
Sbjct: 3334 KHHVTETTTTTTVTREYFDEHEPLVSQEI 3362
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 341 WVDGHRNSGRIQRFRLQFPDNDVGGGRTVSSGPSR 445
W DGH F PDND G GR GP R
Sbjct: 123 WTDGHTTGTEAMVFGPGQPDNDHGAGR----GPQR 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,906,193
Number of Sequences: 27780
Number of extensions: 279949
Number of successful extensions: 852
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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