Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B18
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 124 1e-27
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 104 9e-22
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 101 9e-21
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 101 9e-21
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 99 5e-20
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 96 4e-19
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 89 5e-17
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 88 1e-16
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 85 8e-16
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 85 8e-16
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 81 2e-14
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 79 4e-14
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 79 4e-14
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 77 2e-13
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 77 3e-13
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 76 5e-13
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 75 9e-13
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 74 2e-12
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 72 6e-12
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 72 8e-12
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 70 3e-11
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 69 4e-11
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 67 2e-10
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 64 2e-09
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 63 3e-09
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 60 3e-08
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 60 3e-08
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 56 4e-07
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 54 2e-06
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 52 5e-06
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 5e-04
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 40 0.039
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep: LO... 33 3.4
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 32 6.0
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 124 bits (298), Expect = 1e-27
Identities = 64/129 (49%), Positives = 86/129 (66%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V Q + V+ +AA KK+G+ + + K + + + NWFY R A+ RH+Y
Sbjct: 7 KDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKEL-APYDENWFYTRAASTARHLY 65
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT
Sbjct: 66 LRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTP 125
Query: 361 QXRRDLDRI 387
Q +RDLDRI
Sbjct: 126 QGQRDLDRI 134
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 104 bits (250), Expect = 9e-22
Identities = 58/121 (47%), Positives = 75/121 (61%)
Frame = +1
Query: 25 VKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIYIRSPVGVK 204
VK +A KK G+ + K SS + +WFYVRCAAILRH+YIR P G+
Sbjct: 15 VKALAQFLKKTGKVRLPDWTDVVKLSSANQL-APYNPDWFYVRCAAILRHLYIR-PTGLT 72
Query: 205 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQXRRDLDR 384
+ K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ RRDLDR
Sbjct: 73 GLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDR 132
Query: 385 I 387
+
Sbjct: 133 L 133
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 101 bits (242), Expect = 9e-21
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Frame = +1
Query: 4 AVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIYI 183
++ Q ++V+ +A KK+G+ + K + + + +W+YVR A++ R +YI
Sbjct: 9 SIDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKEL-APVDSDWYYVRTASVARRLYI 67
Query: 184 RSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 357
RSP GV + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 68 RSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 101 bits (242), Expect = 9e-21
Identities = 50/129 (38%), Positives = 78/129 (60%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V + VK +AH K++G+ + K + + +W+Y R A+I R IY
Sbjct: 10 KDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKEL-PPYDPDWYYTRAASIARKIY 68
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+
Sbjct: 69 LRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITS 128
Query: 361 QXRRDLDRI 387
Q RRDLD++
Sbjct: 129 QGRRDLDQV 137
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 99.1 bits (236), Expect = 5e-20
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ +
Sbjct: 74 DWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKM 133
Query: 316 KLVEKVQDGGRILTTQXRRDLDRI 387
+++ GGR++T+Q RRDLD++
Sbjct: 134 GIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 95.9 bits (228), Expect = 4e-19
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+YVR AAI RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSLE +
Sbjct: 51 DWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKI 110
Query: 316 KLVEKVQDGGRILTTQXRRDLDRI 387
++EK +GGR ++ Q +RDLDRI
Sbjct: 111 GVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 89.0 bits (211), Expect = 5e-17
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Frame = +1
Query: 7 VAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIYIR 186
V ++ +K A H K++G+ + K +S + A +W+Y+R A+I R +Y+R
Sbjct: 18 VKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADP-DWYYIRAASIARKVYLR 76
Query: 187 SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGGRIL 354
GV ++ K++GG R GV HF ++SG + R LQ LE +K+VEK V GGR +
Sbjct: 77 QYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKI 136
Query: 355 TTQXRRDLDRI 387
T+ ++DLDRI
Sbjct: 137 TSHGQQDLDRI 147
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 87.8 bits (208), Expect = 1e-16
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+Y R A+ILR +YI PVG++ + +GGRK G P F ++ GSI RKALQ LEA
Sbjct: 49 DWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAA 108
Query: 316 KLVEKVQDGGRILTTQXRRDLDRI 387
+EKV GR++T + R LD+I
Sbjct: 109 GFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 85.0 bits (201), Expect = 8e-16
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V + + T A KK G+ Q + K ++ + +W Y R A + R +Y
Sbjct: 9 KDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNP-DWIYYRIATLARKVY 67
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILT 357
IR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR +T
Sbjct: 68 IRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTIT 127
Query: 358 TQXRRDLDRI 387
RRDLDRI
Sbjct: 128 ATGRRDLDRI 137
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 85.0 bits (201), Expect = 8e-16
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+YVR AA+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +QSLE +
Sbjct: 125 DWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKI 184
Query: 316 KLVEKVQD-GGRILTTQXRRDLDRI 387
++E ++ GGR +T +RDLDRI
Sbjct: 185 GVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/83 (44%), Positives = 56/83 (67%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+YVR AA+LR +YI PVGV ++ +GG+K G P F R SG+I R+ALQ LE
Sbjct: 49 DWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEES 108
Query: 316 KLVEKVQDGGRILTTQXRRDLDR 384
L+++ ++ GR++T + R LD+
Sbjct: 109 GLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 79.4 bits (187), Expect = 4e-14
Identities = 43/127 (33%), Positives = 71/127 (55%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V ++ V T A+H K+ G + + K ++ + + +W Y+R A+I R +Y
Sbjct: 14 KDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASREL-APYDPDWLYIRIASIARKLY 72
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
IR +G KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T+
Sbjct: 73 IRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITS 132
Query: 361 QXRRDLD 381
+ + ++D
Sbjct: 133 KGQSEMD 139
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 79.4 bits (187), Expect = 4e-14
Identities = 36/84 (42%), Positives = 54/84 (64%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+Y+R A+I R +YI PVG++ + +GGRKR G P F + SG+I R AL LE L
Sbjct: 47 DWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQL 106
Query: 316 KLVEKVQDGGRILTTQXRRDLDRI 387
V+K ++ GR++T R LD++
Sbjct: 107 GFVKKTRE-GRVVTPMGRSFLDKV 129
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W+Y+R A+ILR +Y+ PVGV + +GGR+ G P F + SG+I RK LQ LE
Sbjct: 49 DWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEA 108
Query: 316 KLVEKVQDGGRILTTQXRRDLD 381
LVEK ++ GR++T + R +D
Sbjct: 109 GLVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 76.6 bits (180), Expect = 3e-13
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W++ RCA+I+R IY+ P+G+ + K +GG K +G +H + G+I R A+ LE L
Sbjct: 48 DWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKL 107
Query: 316 KLVEKVQDGGRILTTQXRRDLDRI 387
+EKV+ GRI++ Q + LDR+
Sbjct: 108 GYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 75.8 bits (178), Expect = 5e-13
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEA 312
+W+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ LE
Sbjct: 50 DWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEE 109
Query: 313 LKLVEKVQDGGRILTTQXRRDLD 381
LV KV GR ++ R LD
Sbjct: 110 AGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 74.9 bits (176), Expect = 9e-13
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+WFY+R AA+LRH+Y GV + K++ +KRNG P+H CR+SG I R +Q LE++
Sbjct: 73 DWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESI 132
Query: 316 KLVEK-VQDGGRILT 357
+E+ ++ GR L+
Sbjct: 133 GFLEQDLKKHGRRLS 147
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/129 (31%), Positives = 67/129 (51%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V +K A H KK+G+ + + K + + + +W Y+R AAI R +Y
Sbjct: 8 KDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKEL-APLNPDWIYIRAAAIARKVY 66
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
+ + +GV + + +G + PSH SG + R LQ LE + +V K+Q GR LT
Sbjct: 67 LNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTK 125
Query: 361 QXRRDLDRI 387
+ R+D+D+I
Sbjct: 126 EGRKDMDKI 134
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 72.1 bits (169), Expect = 6e-12
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 139 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 318
WFY+R AAILRH+Y G+ + +++ RKR G P+H C +SG I R +Q LEA
Sbjct: 74 WFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANG 133
Query: 319 LVEKVQDG-GRILT 357
+EK +D GR L+
Sbjct: 134 FLEKSKDNKGRRLS 147
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 71.7 bits (168), Expect = 8e-12
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H +S I R L L++L
Sbjct: 64 DWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSL 123
Query: 316 KLVE-KVQDGGRILTTQXRRDLDRI 387
LVE G R L+ Q +R+LD I
Sbjct: 124 GLVEFNPNTGTRRLSPQGQRELDSI 148
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/83 (34%), Positives = 51/83 (61%)
Frame = +1
Query: 139 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 318
W++ RCA+++R IY+ P+G+ + +GG K G ++ ++ G+I R A+ LE L
Sbjct: 43 WWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLG 102
Query: 319 LVEKVQDGGRILTTQXRRDLDRI 387
+EK+ GRI++ Q + LDR+
Sbjct: 103 YIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 69.3 bits (162), Expect = 4e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W++ R AA+LR +Y+ P+GV+ + +GG K G P+ F + SGS+ RKALQ LEA
Sbjct: 49 DWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAA 108
Query: 316 KLVEKVQDGGRI 351
L+ + G ++
Sbjct: 109 GLIVHDKTGRKV 120
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 67.3 bits (157), Expect = 2e-10
Identities = 44/129 (34%), Positives = 63/129 (48%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V+ + +KT A H K+ G+ K SS + +W+Y+RCAA+LR IY
Sbjct: 32 KDVSAWRWIKTAARHFKQEGKIFVPNCTEIMK-SSHGRERAPQNPDWYYIRCAAVLRAIY 90
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
+R VG ++K FG +K G P H SS A +SL L LVE G+ LT
Sbjct: 91 LRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQRLTR 150
Query: 361 QXRRDLDRI 387
+ + D +
Sbjct: 151 KGHKFADSL 159
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 64.1 bits (149), Expect = 2e-09
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K V ++ A + KKN + + S + L S + +W YVR AA+ R IY
Sbjct: 59 KDVPAQDFIRGYAEYLKKNNKIK-IPEWASIVKTGLGKETSPIDQDWMYVRAAALARKIY 117
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-----VQDGG 345
+R GV +T +FG NG S SG + R LQ LE +K+++K ++ G
Sbjct: 118 VRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIKVLKKDNKSLLKKGS 173
Query: 346 RILTTQXRRDLDRI 387
RI+T + ++DL+RI
Sbjct: 174 RIVTKEGQQDLNRI 187
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +1
Query: 235 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQXRRDLDRI 387
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L Q +RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 60.1 bits (139), Expect = 3e-08
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K VA + ++ A+H KK +S+ + +W Y+R AA+ R +Y
Sbjct: 11 KDVAAADFIREYASHLKK-ANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVY 69
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-----G 345
++ G+ T+ IFG K G + G I R AL+SLE LK++ K ++
Sbjct: 70 LKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDKNSATKKFS 129
Query: 346 RILTTQXRRDLDRI 387
R++T + +L+RI
Sbjct: 130 RVITKEGMTELNRI 143
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W++++ ++ILR +YI +GV + + F ++R GV P+H +SG I R LQ LE +
Sbjct: 95 DWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENI 154
Query: 316 KLVEK-VQDGGRILTTQ 363
VE+ + GR LTT+
Sbjct: 155 GYVEQNPKKKGRRLTTK 171
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 56.0 bits (129), Expect = 4e-07
Identities = 37/129 (28%), Positives = 60/129 (46%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
+ +A LV +A H + + K +SL+ A NW+Y+R AA+ R IY
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANN-NWWYIRAAAVTRQIY 72
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
+ + + +G + P H +S + R LQ LE LV +V + GR LT
Sbjct: 73 LHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAGLV-RVAEKGRQLTP 131
Query: 361 QXRRDLDRI 387
+ ++ LD+I
Sbjct: 132 KGQKLLDQI 140
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEAL 315
+W YVR A++LR +YI +G+ ++ +GG+ G H S SI R LE+
Sbjct: 49 DWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESA 108
Query: 316 KLVEKVQDGGRILTTQXRRDLD 381
LV+K Q GR L+ Q LD
Sbjct: 109 GLVQKTQK-GRSLSPQGMSLLD 129
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 52.4 bits (120), Expect = 5e-06
Identities = 33/127 (25%), Positives = 63/127 (49%)
Frame = +1
Query: 1 KAVAQSKLVKTVAAHXKKNGQSQGX*AHGSCKXSSLQXAGSAMTLNWFYVRCAAILRHIY 180
K + + + A +K+GQ CK SSL+ + NW + R A+I+ Y
Sbjct: 6 KDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQS-NWIFKRMASIIIKFY 64
Query: 181 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTT 360
I +G + + +I+ G+K+ S SG I R +++ LE +K+++K + G L+
Sbjct: 65 IYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIKELEKMKILKKDESGRFGLSK 122
Query: 361 QXRRDLD 381
+ + ++D
Sbjct: 123 KAQNEID 129
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 226 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 318
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 39.5 bits (88), Expect = 0.039
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +1
Query: 136 NWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIARKALQS 303
+++YVR A++LR + P+G++ + +G +KR V P S + R +LQ+
Sbjct: 59 DFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQA 118
Query: 304 LEALKLVEKVQDGGRILTTQXRRDLDRI 387
LE LV GR ++ L +
Sbjct: 119 LEEDGLVTTAAGEGRRISDDGEAFLSEV 146
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 215 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 313
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_Q66KP5 Cluster: LOC446927 protein; n=3; Xenopus|Rep:
LOC446927 protein - Xenopus laevis (African clawed frog)
Length = 353
Score = 33.1 bits (72), Expect = 3.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 150 ALCCHPSSYLH-SLTCWSKDCHQDLWWAQT*WSYTFT-FLQVIRQYCTQGFAIVGGIEAC 323
A+C ++H SL+C + C +Y F V+R C +GF ++G +
Sbjct: 70 AVCSSAGIWIHASLSCARRQCSLSDTLENGDITYENNKFQNVVRFSCKEGFVLIGANSST 129
Query: 324 *ESSGRWSHS 353
SG+W+ S
Sbjct: 130 CNESGKWNES 139
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 32.3 bits (70), Expect = 6.0
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = -1
Query: 384 SVKVSSTLCGENATTVLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDS 205
SV++S +L + A +L + Q LQ L+ A +T AE+ ++++ DLG
Sbjct: 25 SVQISLSLRCQFAAAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHG 84
Query: 204 LYSNR*ANVNMTKDGSTTHIEPI 136
+ V + + GS++ +EP+
Sbjct: 85 ANPSATPEVQVPRCGSSSRVEPV 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,358,311
Number of Sequences: 1657284
Number of extensions: 7494753
Number of successful extensions: 17125
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 16621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17110
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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