Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_B17
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0002 - 6858257-6861205                                           30   1.3  
02_01_0548 + 4035265-4035431,4035517-4035651,4035859-4036081,403...    29   3.1  
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580...    29   4.1  
10_08_1024 + 22371260-22371481,22371514-22372188,22372291-223732...    28   7.2  
10_01_0141 - 1686827-1687063,1687160-1687315,1688046-1688974,168...    28   7.2  
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976...    27   9.5  

>10_03_0002 - 6858257-6861205
          Length = 982

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1

Query: 124 DDDTVRSTPSHHRSRPVHV*RTPDDPQPVXTR 219
           D+ +V S P HHR R V   R+P   +PV  R
Sbjct: 365 DERSVHSPPDHHRERRVERPRSPPRRRPVDLR 396


>02_01_0548 +
           4035265-4035431,4035517-4035651,4035859-4036081,
           4036282-4036468,4036627-4036811,4037435-4037572,
           4037995-4038123
          Length = 387

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 128 MTRSALLLATIGLGLSTFSVRQMILNQSXRV*DKPVLPEQPAGASLS 268
           MT+S L L TI    S    +  +L Q+    D PV P  P G  LS
Sbjct: 334 MTQSGLFLRTIQGAASMTGRKVTVLRQAGAACDHPVDPAYPEGRYLS 380


>03_05_0725 +
           27155736-27155746,27155798-27155949,27156108-27158068,
           27159169-27159397,27159506-27159634,27159725-27159838,
           27160059-27160258,27160301-27160599,27160713-27160923,
           27161017-27161172,27161290-27161447,27161532-27161724,
           27162015-27162406,27162537-27162717,27162802-27163031,
           27163108-27163753,27163833-27163902,27163994-27164244
          Length = 1860

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 136 VRSTPSHHRSRPVHV*RTPDDPQPV 210
           +RS PSHHR+  +HV +T +D +PV
Sbjct: 82  LRSWPSHHRA--LHVKKTIEDAEPV 104


>10_08_1024 +
           22371260-22371481,22371514-22372188,22372291-22373236,
           22389377-22389552
          Length = 672

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 124 DDDTVRSTPSHHRSRPVHV*RTPDDPQPVXTR--LGQTSTPRTTRRS 258
           D+ +V S P  HR R V   R+P   +PV  R  + Q    R  R S
Sbjct: 186 DERSVHSLPERHRERRVERPRSPPRQRPVDLRDTINQRRAARGHRHS 232


>10_01_0141 -
           1686827-1687063,1687160-1687315,1688046-1688974,
           1689595-1689640,1689914-1689932,1690751-1690962,
           1691063-1691218,1692240-1693184,1693448-1693597
          Length = 949

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 27  VSYIIWIGHNE-NDTSCPATR*DSHIRSKR 113
           +SYIIW G+NE  D++  A R  SH   K+
Sbjct: 179 LSYIIWDGYNEYKDSNVDANRWISHALQKQ 208


>07_03_0873 +
           22194172-22195434,22195534-22195670,22197531-22197639,
           22197739-22197865,22197952-22198012,22199332-22199722
          Length = 695

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +1

Query: 103 AASEP*EDDDTVRSTPSHHRSRPVHV*RTPDDPQPVXTRLGQTSTPRTTRRSK 261
           A S+P  +DD    TP+  R R      T D P       G  + PR  RR K
Sbjct: 225 ATSDPPPEDDEEEGTPAQPRRRKRAA--TSDPPPEDDEEEGTPAPPRRRRRRK 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,461,877
Number of Sequences: 37544
Number of extensions: 254323
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)