Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_B17
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p pro...    30   2.3  
AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB...    30   2.3  
AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA...    30   2.3  
AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1 pr...    30   3.0  
AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1 pr...    30   3.0  

>AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p
           protein.
          Length = 386

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 137 TVSSSSHGSLAANM*VLTRSWATCVVFIMSDPNYIRH 27
           T SSS+ GS +A++    R+WA   VF+ S   Y  H
Sbjct: 64  TSSSSTIGSRSASISSQQRNWANAPVFVPSQKRYTAH 100


>AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB,
           isoform B protein.
          Length = 386

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 137 TVSSSSHGSLAANM*VLTRSWATCVVFIMSDPNYIRH 27
           T SSS+ GS +A++    R+WA   VF+ S   Y  H
Sbjct: 64  TSSSSTIGSRSASISSQQRNWANAPVFVPSQKRYTAH 100


>AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA,
           isoform A protein.
          Length = 386

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 137 TVSSSSHGSLAANM*VLTRSWATCVVFIMSDPNYIRH 27
           T SSS+ GS +A++    R+WA   VF+ S   Y  H
Sbjct: 64  TSSSSTIGSRSASISSQQRNWANAPVFVPSQKRYTAH 100


>AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 137 TVSSSSHGSLAANM*VLTRSWATCVVFIMSDPNYIRH 27
           T SSS+ GS +A++    R+WA   VF+ S   Y  H
Sbjct: 64  TSSSSTIGSHSASISSQQRNWANAPVFVPSQKRYTAH 100


>AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 137 TVSSSSHGSLAANM*VLTRSWATCVVFIMSDPNYIRH 27
           T SSS+ GS +A++    R+WA   VF+ S   Y  H
Sbjct: 64  TSSSSTIGSHSASISSQQRNWANAPVFVPSQKRYTAH 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,989,575
Number of Sequences: 53049
Number of extensions: 457006
Number of successful extensions: 915
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)