Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B08
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 172 2e-43
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 158 4e-39
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 158 4e-39
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 137 6e-33
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 122 2e-28
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 115 3e-26
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 84 7e-17
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 66 2e-11
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 48 8e-06
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 44 7e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 44 1e-04
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 1e-04
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 40 0.002
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 40 0.002
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 40 0.002
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 40 0.002
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 40 0.002
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 39 0.004
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 39 0.004
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 39 0.004
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 39 0.004
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 39 0.004
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 39 0.004
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 36 0.019
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 36 0.019
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 36 0.019
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 36 0.019
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 35 0.044
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 35 0.058
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 35 0.058
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 35 0.058
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 34 0.077
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 34 0.077
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 34 0.10
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 34 0.10
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 34 0.10
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 34 0.10
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 34 0.10
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 33 0.13
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.18
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 33 0.18
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 33 0.18
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 33 0.18
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 33 0.18
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 33 0.24
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 33 0.24
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 33 0.24
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 33 0.24
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 32 0.31
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 32 0.31
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 32 0.31
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical pr... 31 0.54
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 31 0.54
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 31 0.54
AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein. 31 0.54
AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeri... 31 0.54
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 31 0.54
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 31 0.54
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.72
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 31 0.72
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 31 0.72
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 31 0.72
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 31 0.72
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 31 0.72
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 31 0.72
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 31 0.72
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 31 0.95
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 31 0.95
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 30 1.3
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 30 1.7
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 29 2.9
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 3.8
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical pr... 27 8.9
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 27 8.9
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 27 8.9
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 27 8.9
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 27 8.9
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 172 bits (419), Expect = 2e-43
Identities = 79/87 (90%), Positives = 82/87 (94%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MGN+F +LFKGLFGK+EM ILMVGLDAAGKTTILYKLKL EIVTTIPTIGFNVETV YKN
Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNTQG 363
I FTVWDVGGQDKIRPLWRHYFQNTQG
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQG 87
Score = 146 bits (353), Expect = 2e-35
Identities = 69/94 (73%), Positives = 74/94 (78%)
Frame = +2
Query: 359 RALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGL 538
+ LIFVV SNDRER+GEA DAVLL+FANKQDLP AMNAA +TDKLGL
Sbjct: 86 QGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGL 145
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQLKN 640
HSLRNR+WYIQATCATSG GLY GLDWLSNQLKN
Sbjct: 146 HSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKN 179
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 158 bits (383), Expect = 4e-39
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MG ++LF LFGK+++ ILMVGLDAAGKTTILYKLKL EIVTTIPTIGFNVETV YKN
Sbjct: 1 MGLTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNTQG 363
I FTVWDVGGQDKIRPLWRHYFQNTQG
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQG 87
Score = 129 bits (311), Expect = 2e-30
Identities = 61/92 (66%), Positives = 68/92 (73%)
Frame = +2
Query: 359 RALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGL 538
+ LIFVV SND+ERI E+ DA LL+FANKQDLPNAM AA +TDKLGL
Sbjct: 86 QGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGL 145
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQL 634
H+LR+R WYIQATCAT G GLY GLDWLSNQL
Sbjct: 146 HNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 158 bits (383), Expect = 4e-39
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MG ++LF LFGK+++ ILMVGLDAAGKTTILYKLKL EIVTTIPTIGFNVETV YKN
Sbjct: 1 MGLTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNTQG 363
I FTVWDVGGQDKIRPLWRHYFQNTQG
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQG 87
Score = 129 bits (311), Expect = 2e-30
Identities = 61/92 (66%), Positives = 68/92 (73%)
Frame = +2
Query: 359 RALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGL 538
+ LIFVV SND+ERI E+ DA LL+FANKQDLPNAM AA +TDKLGL
Sbjct: 86 QGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNAMTAAELTDKLGL 145
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQL 634
H+LR+R WYIQATCAT G GLY GLDWLSNQL
Sbjct: 146 HNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 137 bits (332), Expect = 6e-33
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = +1
Query: 136 LFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGGQ 315
+FGKKE+ ILM+GLDAAGKTTILYKLKL + VTTIPT+GFNVETV YKNI F VWDVGGQ
Sbjct: 8 IFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQ 67
Query: 316 DKIRPLWRHYFQNTQ 360
DKIRPLWRHY+ TQ
Sbjct: 68 DKIRPLWRHYYTGTQ 82
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +2
Query: 359 RALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGL 538
+ALIFV+ + DR+R+ EA +A++L+FANKQDL +AM I DKLGL
Sbjct: 82 QALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKLGL 141
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQLK 637
+R+RNWY+Q +CA++G GL+ GL WLS K
Sbjct: 142 TRIRDRNWYVQPSCASTGDGLHEGLTWLSQNCK 174
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 122 bits (295), Expect = 2e-28
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MG + + F+GLFG +EM IL++GLD AGKTTILY+L++ E+VTTIPTIGFNVE V YKN
Sbjct: 1 MGGVMS-YFRGLFGAREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKN 59
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNT 357
+ F VWD+GGQ IRP WR Y+ NT
Sbjct: 60 LKFQVWDLGGQTSIRPYWRCYYANT 84
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/92 (39%), Positives = 50/92 (54%)
Frame = +2
Query: 362 ALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGLH 541
A+I+VV S DR+R+G + AVL + ANKQD+ + + LGL
Sbjct: 86 AIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLD 145
Query: 542 SLRNRNWYIQATCATSGXGLYXGLDWLSNQLK 637
+LRNR I T A+ G GL +DWL+NQL+
Sbjct: 146 ALRNRTIQIFKTSASKGEGLDPAMDWLANQLQ 177
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 115 bits (276), Expect = 3e-26
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MG F+ + +F E LM+GLD AGKTTILYKLKL E V TIPTIGFNVETV ++
Sbjct: 1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQK 60
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNT 357
I TVWDVGGQ KIR LW++YF NT
Sbjct: 61 ITLTVWDVGGQKKIRALWKYYFPNT 85
Score = 88.2 bits (209), Expect = 4e-18
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +2
Query: 365 LIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGLHS 544
L+FVV S+D ERI EA D+ LL+FANKQD+PNA + A +T L L S
Sbjct: 88 LVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGS 147
Query: 545 LRNRNWYIQATCATSGXGLYXGLDWLSNQLK 637
L+NR W+I T A SG GLY GL W+ Q+K
Sbjct: 148 LKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN 282
MG + A LF+ + K+ I++VGLD AGKTTILY + V T PTIG NVE V Y+N
Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRN 60
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNT 357
+ F +WD+GGQ+ +R W Y+ T
Sbjct: 61 LDFVIWDIGGQESLRKSWSTYYVQT 85
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 365 LIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGLHS 544
+I V+ S+D RI A +L+ ANKQDLP AMN A ++ +LGL +
Sbjct: 88 VIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQT 147
Query: 545 LRN-RNWYIQATCATSGXGLYXGLDWLSNQL 634
LR R W I CA G GL L+W++N L
Sbjct: 148 LRGARKWQINGCCAVKGEGLPEALEWIANNL 178
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 84.2 bits (199), Expect = 7e-17
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Frame = +1
Query: 151 EMXILMVGLDAAGKTTILYKLKLXEIVTTI---PTIGFNVETVXYKNIXFTVWDVGGQDK 321
E ++++GLD AGKT+I+ +LK ++ T + PTIGFN+ET+ YKN WDVGG K
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPK 428
Query: 322 IRPLWRHYFQNTQ 360
+R LW+HY+ N Q
Sbjct: 429 LRHLWKHYYSNAQ 441
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/72 (48%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +1
Query: 145 KKEMXILMVGLDAAGKTTILYKLKLXEIVTTI-PTIGFNVETVXYKNIXFTVWDVGGQDK 321
++EM IL++GLD AGKTT++ K L E TI PT+GF+++TV +K+ +WDVGGQ
Sbjct: 14 EREMRILILGLDNAGKTTLMKKF-LDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKS 72
Query: 322 IRPLWRHYFQNT 357
+R W++YF++T
Sbjct: 73 LRSYWKNYFEST 84
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = +2
Query: 362 ALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGLH 541
ALI+VV S+DRER+ + A LL+ ANK DLP A++ I L LH
Sbjct: 86 ALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLH 145
Query: 542 SLRNRNWYIQATCATSGXGLYXGLDWLSNQL 634
S+++ +W I + CA SG L + WL + +
Sbjct: 146 SIKSHHWKIFSCCALSGDRLVQAMTWLCDDV 176
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 127 FKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETV-XYKNIXFTVWD 303
FK G+ E+ IL++GLD AGKTTIL +L ++ PT GFNV+TV +I VWD
Sbjct: 10 FKSPSGR-EIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWD 68
Query: 304 VGGQDKIRPLWRHYFQN 354
+GGQ IRP W +Y++N
Sbjct: 69 IGGQRSIRPYWSNYYEN 85
Score = 74.1 bits (174), Expect = 8e-14
Identities = 38/95 (40%), Positives = 53/95 (55%)
Frame = +2
Query: 365 LIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKLGLHS 544
LIFV+ SND++R E +LIFANKQDL A ++ IT KL L
Sbjct: 89 LIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEITRKLNLDL 148
Query: 545 LRNRNWYIQATCATSGXGLYXGLDWLSNQLKNANR 649
LR+R W+IQA A G+ G+ W+++ LK A++
Sbjct: 149 LRDRTWHIQACSALKNEGINDGITWVASNLKPASK 183
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 142 GKKEMXILMVGLDAAGKTTILYKLKLXEIVTT--IPTIGFNVETVXYKNIXFTVWDVGGQ 315
GKK++ I++VGLD +GKTTIL +LK E + +PT+G V +N+ F +D+ GQ
Sbjct: 14 GKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQ 73
Query: 316 DKIRPLWRHYFQNTQG 363
K R W YF ++QG
Sbjct: 74 MKYRSTWESYFHSSQG 89
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 359 RALIFVVXSNDRERIG--EAXXXXXXXXXXXXXXDAVLLIFANKQDLPNAMNAAXITDKL 532
+ +IFV+ S+DR R+ + ++I ANK D+P AM A+ IT L
Sbjct: 88 QGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVAL 147
Query: 533 GLHSLRNRNWYIQATCATSGXGLYXGLDWLSNQL 634
GL+ R+ W I +TCA +G GL + LS ++
Sbjct: 148 GLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTT-IPTIGFNVETVXYK 279
M N + + LF K+EM + +VGL +GKTT + + + IPT+GFN+ +
Sbjct: 4 MVNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKG 63
Query: 280 NIXFTVWDVGGQDKIRPLWRHY 345
N+ +WD+GGQ + R +W Y
Sbjct: 64 NVTIKLWDIGGQPRFRSMWERY 85
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 362 ALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAV-LLIFANKQDLPNAMNAAXITDKLGL 538
A++F+V + D E++ EA DA+ +L+ NK+DLP A++ + +++ L
Sbjct: 91 AIVFMVDAADEEKL-EASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNL 149
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQLK 637
S++NR + + L WL + K
Sbjct: 150 SSIQNREICCYSISCKEKENIDITLQWLIDHSK 182
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTT-IPTIGFNVETVXYK 279
M N + + LF K+EM + +VGL +GKTT + + + IPT+GFN+ +
Sbjct: 4 MVNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKG 63
Query: 280 NIXFTVWDVGGQDKIRPLWRHY 345
N+ +WD+GGQ + R +W Y
Sbjct: 64 NVTIKLWDIGGQPRFRSMWERY 85
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 362 ALIFVVXSNDRERIGEAXXXXXXXXXXXXXXDAV-LLIFANKQDLPNAMNAAXITDKLGL 538
A++F+V + D E++ EA DA+ +L+ NK+DLP A++ + +++ L
Sbjct: 91 AIVFMVDAADEEKL-EASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERMNL 149
Query: 539 HSLRNRNWYIQATCATSGXGLYXGLDWLSNQLK 637
S++NR + + L WL + K
Sbjct: 150 SSIQNREICCYSISCKEKENIDITLQWLIDHSK 182
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +1
Query: 133 GLFGKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGG 312
GL KK + + GLD AGKTT+L+ LK I +PT+ E + I FT +D+GG
Sbjct: 16 GLANKKGKLVFL-GLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGG 74
Query: 313 QDKIRPLWRHYF 348
+ R +W+ YF
Sbjct: 75 HAQARRVWKDYF 86
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Frame = +1
Query: 103 MGNMFANLFKGLFGKKEMXILMVGLDAAGKTTILYKLK---LXEIVTTIP-----TIGFN 258
M + A +++ F KK+ +++VGLD AGKTT L + K + + P T+G N
Sbjct: 1 MYTLSAGIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLN 60
Query: 259 VETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
V N WD+GGQ+ +R LW Y+ +
Sbjct: 61 TGNVELNNTCLHFWDLGGQESLRELWATYYDD 92
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 145 KKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXY-KNIXFTVWDVGGQDK 321
++E+ + G+ +AGKTT L LK + + T GF+ + Y + T++DVGG
Sbjct: 22 RREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKG 81
Query: 322 IRPLWRHYFQNTQG 363
IR +W +Y+ G
Sbjct: 82 IRGIWSNYYAEVHG 95
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 145 KKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXY-KNIXFTVWDVGGQDK 321
++E+ + G+ +AGKTT L LK + + T GF+ + Y + T++DVGG
Sbjct: 22 RREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKG 81
Query: 322 IRPLWRHYFQNTQG 363
IR +W +Y+ G
Sbjct: 82 IRGIWSNYYAEVHG 95
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +1
Query: 145 KKEMXILMVGLDAAGKTTILYKLKLXEIVTTIP-TIG--FNVETVXY--KNIXFTVWDVG 309
++ I+M G A GK++ + ++ + +P T+G F+V+TV +N+ +WD
Sbjct: 459 ERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTA 518
Query: 310 GQDKIRPLWRHYFQNTQGSNL 372
GQ++ R L + YF+ G+ L
Sbjct: 519 GQERFRSLCKSYFRRADGAIL 539
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXYKN--IXFTVWDVGGQDKI 324
+L++G GKT ILY+ TT I TIG F ++T+ K I +WD GQ++
Sbjct: 12 LLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERF 71
Query: 325 RPLWRHYFQNTQG 363
+ Y++ G
Sbjct: 72 HTITTSYYRGAMG 84
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXYKN--IXFTVWDVGGQDKI 324
+L++G GKT ILY+ TT I TIG F ++T+ K I +WD GQ++
Sbjct: 12 LLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERF 71
Query: 325 RPLWRHYFQNTQG 363
+ Y++ G
Sbjct: 72 HTITTSYYRGAMG 84
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQGS 366
IPT+G +T+ K F ++DVGGQ R W H F N +
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNAT 223
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G GKT +L++ + I TIG F + T+ K I +WD GQ++
Sbjct: 11 LLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERF 70
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 71 RTITTAYYRGAMG 83
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQGS 366
IPT+G +T+ K F ++DVGGQ R W H F N +
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNAT 223
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G GKT +L++ + I TIG F + T+ K I +WD GQ++
Sbjct: 11 LLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERF 70
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 71 RTITTAYYRGAMG 83
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G GKT +L++ + I TIG F + T+ K I +WD GQ++
Sbjct: 11 LLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERF 70
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 71 RTITTAYYRGAMG 83
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G + GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 25 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERY 84
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 85 RTITTAYYRGAMG 97
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G + GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 25 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERY 84
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 85 RTITTAYYRGAMG 97
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G + GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 25 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERY 84
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 85 RTITTAYYRGAMG 97
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G + GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 39 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERY 98
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 99 RTITTAYYRGAMG 111
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIV----TTIPTIGFNVET--VXYKNIXFTVWDVGGQDK 321
I++VG GKT ++ + + V TTI + F ++T V K + +WD GGQ++
Sbjct: 13 IVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIG-VDFTMKTLVVDGKRVKLQIWDTGGQER 71
Query: 322 IRPLWRHYFQNTQG 363
R + + Y+++ G
Sbjct: 72 FRTITQSYYRSANG 85
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G + GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 25 LLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERY 84
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 85 RTITTAYYRGAMG 97
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+PT G + KN F ++DVGGQ R W H F + Q
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQ 230
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+PT G + KN F ++DVGGQ R W H F + Q
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQ 230
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKL---KLXEIVTTIPTIGFNVETVXY---KNIXFTVWDVGGQDK 321
++ VG A GKT L++ + + + F V+T+ + I +WD GQ++
Sbjct: 205 VVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQER 264
Query: 322 IRPLWRHYFQNTQG 363
R + + YF+ G
Sbjct: 265 FRSITKQYFRKADG 278
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G GK+ +L + + I TIG F + T+ K I +WD GQ++
Sbjct: 14 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 73
Query: 325 RPLWRHYFQNTQG 363
R + Y++ G
Sbjct: 74 RTITSSYYRGAHG 86
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.044
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 163 LMVGLDAAGKTTILYKLKLXEIVTTIP-TIGFNVET----VXYKNIXFTVWDVGGQDKIR 327
+++G GK+ +L++ + + P TIG T V + I +WD GQ++ R
Sbjct: 15 IIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFR 74
Query: 328 PLWRHYFQNTQGS 366
+ R Y++ G+
Sbjct: 75 AVTRSYYRGAAGA 87
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
I T G N YK + F + DVGGQ R W H F N
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
I T G N YK + F + DVGGQ R W H F N
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIG--FNVETVXY--KNIXFTVWDVGGQDKI 324
+L++G GK+++L + I TIG F + T+ + + +WD GQ++
Sbjct: 13 LLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERF 72
Query: 325 RPLWRHYFQNTQG 363
R + Y++ T G
Sbjct: 73 RTITSTYYRGTHG 85
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 154 MXILMVGLDAAGKTTILYKLKLXEIVTT--IPTIGFNVE----TVXYKNIXFTVWDVGGQ 315
+ ++++G GKT +L + K + I T+G + T+ K + +WD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 316 DKIRPLWRHYFQN 354
++ R + Y+++
Sbjct: 63 ERFRSVTTSYYRD 75
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 154 MXILMVGLDAAGKTTILYKLKLXEIVTT--IPTIGFNVE----TVXYKNIXFTVWDVGGQ 315
+ ++++G GKT +L + K + I T+G + T+ K + +WD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 316 DKIRPLWRHYFQN 354
++ R + Y+++
Sbjct: 63 ERFRSVTTSYYRD 75
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T + T G +KN+ F ++DVGGQ R W H F++
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFED 218
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKL---KLXEIVTTIPTIGFN-----VETVXYKNIXFTVWDVGGQ 315
++++G GK+++L K+ EI + PT+G + +E + +WD GQ
Sbjct: 20 LIVIGDSTVGKSSLLRYFTEGKMAEI--SDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
Query: 316 DKIRPLWRHYFQNTQG 363
+K R + + Y++N+ G
Sbjct: 78 EKFRSITKSYYRNSVG 93
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T + T G +KN+ F ++DVGGQ R W H F++
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFED 218
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T + T G +KN+ F ++DVGGQ R W H F++
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFED 218
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T I T G YK+ F V+DVGGQ R W H F++
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFED 217
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T I T G YK+ F V+DVGGQ R W H F++
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFED 217
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 250 GFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQGSNL 372
G + T+ K I +WD GQ+ R + R Y++ G+ L
Sbjct: 44 GARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALL 84
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T +PT+G K F V+DVGGQ R W H F + +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAK 220
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEI-VTTIPTIGFNVET----VXYKNIXFTVWDVGGQDKI 324
++++G GK+ +L + E + + TIG T V K + +WD GQ++
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERY 73
Query: 325 RPLWRHYFQNTQGSNL 372
R + Y++ G+ L
Sbjct: 74 RAITSAYYRGAVGALL 89
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T +PT+G K F V+DVGGQ R W H F + +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAK 220
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T +PT+G K F V+DVGGQ R W H F + +
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAK 220
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEI-VTTIPTIGFNVET----VXYKNIXFTVWDVGGQDKI 324
++++G GK+ +L + E + + TIG T V K + +WD GQ++
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERY 73
Query: 325 RPLWRHYFQNTQGSNL 372
R + Y++ G+ L
Sbjct: 74 RAITSAYYRGAVGALL 89
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T I T G K + F V DVGGQ R W H F N
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 232 TTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
T I T G K + F V DVGGQ R W H F N
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+ + G T YK++ F ++DVGGQ R W H F +
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+ + G T YK++ F ++DVGGQ R W H F +
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+++ I T G K++ F V+DVGGQ R W H F++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFED 218
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+++ I T G K++ F V+DVGGQ R W H F++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFED 218
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +1
Query: 154 MXILMVGLDAAGKTTILYKLKLXEIVTT--IPTIG--FNVETVXY--KNIXFTVWDVGGQ 315
+ IL++G GK++++ + + ++ TIG F V ++ + +WD GQ
Sbjct: 12 LKILIIGESGVGKSSLMLRF-VDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQ 70
Query: 316 DKIRPLWRHYFQNTQG 363
++ R L Y++ QG
Sbjct: 71 ERFRTLTPSYYRGAQG 86
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVTT-IPTIGFNVETVXYKN----IXFTVWDVGGQDKI 324
+++VG GKTT + + E + T+G V + + I F VWD GQ+K
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKF 71
Query: 325 RPLWRHYF 348
L Y+
Sbjct: 72 GGLRDGYY 79
>Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical
protein C34D1.3 protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 211 LKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
L L T I +GF + K + F V+DVGGQ R W H F++
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFED 220
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 211 LKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
L L T I +GF + K + F V+DVGGQ R W H F++
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFED 220
>AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein.
Length = 342
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
+ + + T G K + F V+DVGGQ R W H F N +
Sbjct: 177 LYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVE 221
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 211 LKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
L L T I +GF + K + F V+DVGGQ R W H F++
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFED 220
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 160 ILMVGLDAAGKTTILYKLKLXEIVT-TIPTIG--FNVETVXYKN--IXFTVWDVGGQDKI 324
+++VG GKT ++ K TIG F ++TV N I +WD GQ++
Sbjct: 10 VVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERF 69
Query: 325 RPLWRHYFQN 354
R + + Y+++
Sbjct: 70 RSITQSYYRS 79
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 163 LMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKN-------IXFTVWDVGGQDK 321
+++G GK+ +L + E+ I T VE YK+ + VWD GQ+
Sbjct: 10 VIIGDGGVGKSNLLLRFT-DELFDPIHTTTLGVE-FGYKDLQIDKYKVRLRVWDTCGQEN 67
Query: 322 IRPLWRHYFQNTQGSNL 372
R + R Y++N G+ L
Sbjct: 68 FRSIIRAYYRNALGALL 84
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 148 KEMXILMVGLDAAGKTTILYKLKLXEIVTTIP-TIGFN-VETVXY---KNIXFTVWDVGG 312
K+ ++ +G + GKT+I+ + T TIG + + Y + I +WD G
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 69
Query: 313 QDKIRPLWRHYFQNT 357
Q++ R L Y +++
Sbjct: 70 QERFRSLIPSYIRDS 84
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+PT G + I F + DVGGQ R W H F+N
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFEN 218
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYF 348
+PT G V NI + D GGQ R W H+F
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFF 218
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 226 IVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+++ I T G K++ F V DVGGQ R W H F++
Sbjct: 176 LLSRIKTTGIVEVKFQMKSVDFRVLDVGGQRSERKKWIHCFED 218
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+PT G + I F + DVGGQ R W H F+N
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFEN 218
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYF 348
+PT G V NI + D GGQ R W H+F
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFF 218
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+PT G + I F + DVGGQ R W H F+N
Sbjct: 128 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFEN 166
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQN 354
+PT G + I F + DVGGQ R W H F+N
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFEN 218
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQG 363
+PT G +K + DVGGQ + W H F N G
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNG 217
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 238 IPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQG 363
+PT G +K + DVGGQ + W H F N G
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNG 217
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +1
Query: 151 EMXILMVGLDAAGKTTILYKL---KLXEIVTTIPTIGFNVETVXYKN--IXFTVWDVGGQ 315
+ ++++G A GK++++ + + E + F +TV + I F +WD GQ
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
Query: 316 DKIRPLWRHYFQNTQGS 366
++ L Y++ Q +
Sbjct: 79 ERYHSLAPMYYRGAQAA 95
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +1
Query: 148 KEMXILMVGLDAAGKTTILYKLKLXEIVTTIP--TIGFN-----VETVXYKNIXFTVWDV 306
K + +++VG AGKT +L L T P TIG + V+ ++I +WD
Sbjct: 5 KTVKVVVVGESGAGKTALLTCF-LDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDT 63
Query: 307 GGQDKIRPLWRHYFQNTQ 360
GQ++ R L Y ++ +
Sbjct: 64 AGQERFRQLAPAYIRSAR 81
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 148 KEMXILMVGLDAAGKTTILYKLKLXEIVTTIP-TIGFN-VETVXY---KNIXFTVWDVGG 312
K+ ++ +G + GKT+++ + T TIG + + Y + + +WD G
Sbjct: 9 KKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 68
Query: 313 QDKIRPLWRHYFQNT 357
Q++ R L Y +++
Sbjct: 69 QERFRSLIPSYIRDS 83
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 250 GFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQGSNL 372
GF + K + VWD GQ++ R L Y+++ G+ L
Sbjct: 44 GFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGALL 84
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 124 LFKGLFGKKEMXILMVGLDAAGKTTILYKL--KLXEIVTTIPTIGFNVE---TVXYKNIX 288
+ K + +L VGL GKTTI +L K E TT T VE T+ K+
Sbjct: 29 VLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKITLRIKDKE 88
Query: 289 FTVWDVGGQDKIR 327
+ D G D++R
Sbjct: 89 KEIIDYPGNDRLR 101
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 283 IXFTVWDVGGQDKIRPLWRHYFQNTQG 363
+ +WD GQ++ R L Y++ QG
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGAQG 59
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 137 RPLNKFANIFPILNYYEYNFQKQSRIKEKTQHQ*IPNNS 21
+PL AN+ P L Y+ Q+Q R + H + NN+
Sbjct: 288 QPLPSVANLLPPLTGYQQQQQQQQRPPSQQHHNGVVNNN 326
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +1
Query: 145 KKEMXILMVGLDAAGKTTILYKLKLXEIVTTI-PTIGFNVET----VXYKN----IXFTV 297
K + ++++G GKT+I+Y+ + + TIG + + Y++ + V
Sbjct: 50 KHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQV 109
Query: 298 WDVGGQDKIRPLWRHYFQNTQGS 366
WD GQ++ R + Y +N +
Sbjct: 110 WDTAGQERFRCMVPMYMRNADAA 132
>Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical
protein T14G10.1 protein.
Length = 652
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 142 GKKEMXILMVGLDAAGKTTILYKLKLXEIVTTIPTIGFNVETVXY---KNIXFTVWDVGG 312
G + I GL AGKTTI + L+ IP G + + + + KN+ F+ D
Sbjct: 53 GFRGCTIWFTGLSGAGKTTISFALERTLNKLGIPCYGLDGDNIRHGLCKNLGFSKED--R 110
Query: 313 QDKIR 327
Q+ IR
Sbjct: 111 QENIR 115
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 244 TIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T+ N Y + + DVGGQ R W H F + +
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAK 220
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 244 TIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T+ N Y + + DVGGQ R W H F + +
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAK 260
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 244 TIGFNVETVXYKNIXFTVWDVGGQDKIRPLWRHYFQNTQ 360
T+ N Y + + DVGGQ R W H F + +
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAK 220
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 181 AAGKTTILYKLKLXEIVTTIPTIGFNVETVXYKNIXFTVWDVGGQDKIRPLWR 339
+A T +++LK + +P G V TV + V GG+DK+ LWR
Sbjct: 421 SADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVS-GGKDKVLKLWR 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,051,258
Number of Sequences: 27780
Number of extensions: 272087
Number of successful extensions: 776
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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