Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B05
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 314 5e-86
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 314 5e-86
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 314 5e-86
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 314 5e-86
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 307 1e-83
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d... 32 0.59
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot... 32 0.59
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF... 32 0.59
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE... 32 0.59
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD... 32 0.59
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC... 32 0.59
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB... 32 0.59
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA... 32 0.59
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 314 bits (772), Expect = 5e-86
Identities = 153/187 (81%), Positives = 164/187 (87%)
Frame = +1
Query: 76 GFQRQNSTEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 255
G + EFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT++VQ
Sbjct: 17 GIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQ 76
Query: 256 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 435
KRFN + LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GC
Sbjct: 77 KRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 136
Query: 436 EVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLXIKVKIMLPWDQ 615
EVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVL IKVK+MLP+D
Sbjct: 137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDP 196
Query: 616 QGKNGPK 636
+ K GPK
Sbjct: 197 KNKIGPK 203
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 314 bits (772), Expect = 5e-86
Identities = 153/187 (81%), Positives = 164/187 (87%)
Frame = +1
Query: 76 GFQRQNSTEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 255
G + EFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT++VQ
Sbjct: 24 GIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQ 83
Query: 256 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 435
KRFN + LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GC
Sbjct: 84 KRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 143
Query: 436 EVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLXIKVKIMLPWDQ 615
EVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVL IKVK+MLP+D
Sbjct: 144 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDP 203
Query: 616 QGKNGPK 636
+ K GPK
Sbjct: 204 KNKIGPK 210
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 314 bits (772), Expect = 5e-86
Identities = 153/187 (81%), Positives = 164/187 (87%)
Frame = +1
Query: 76 GFQRQNSTEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 255
G + EFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT++VQ
Sbjct: 17 GIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQ 76
Query: 256 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 435
KRFN + LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GC
Sbjct: 77 KRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 136
Query: 436 EVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLXIKVKIMLPWDQ 615
EVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVL IKVK+MLP+D
Sbjct: 137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDP 196
Query: 616 QGKNGPK 636
+ K GPK
Sbjct: 197 KNKIGPK 203
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 314 bits (772), Expect = 5e-86
Identities = 153/187 (81%), Positives = 164/187 (87%)
Frame = +1
Query: 76 GFQRQNSTEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 255
G + EFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGRRIRELT++VQ
Sbjct: 17 GIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQ 76
Query: 256 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 435
KRFN + LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GC
Sbjct: 77 KRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGC 136
Query: 436 EVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLXIKVKIMLPWDQ 615
EVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVL IKVK+MLP+D
Sbjct: 137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDP 196
Query: 616 QGKNGPK 636
+ K GPK
Sbjct: 197 KNKIGPK 203
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 307 bits (753), Expect = 1e-83
Identities = 150/187 (80%), Positives = 161/187 (86%)
Frame = +1
Query: 76 GFQRQNSTEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 255
G + EFLTRELAEDGYSGVEVRVTP +EIIIMAT+TQ VL EKGRRIRELT++VQ
Sbjct: 17 GIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQ 76
Query: 256 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 435
KRFN + LYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+GC
Sbjct: 77 KRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGC 136
Query: 436 EVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLXIKVKIMLPWDQ 615
EVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVL IKVK+MLP+D
Sbjct: 137 EVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDP 196
Query: 616 QGKNGPK 636
+ K GPK
Sbjct: 197 KNKIGPK 203
>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
dodeca-satellite protein1 protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
isoform F protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
isoform E protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
isoform D protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
isoform C protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
isoform B protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
isoform A protein.
Length = 1301
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 157 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQS 282
T ++ + + +LG+ G+R+RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,139,641
Number of Sequences: 53049
Number of extensions: 598552
Number of successful extensions: 2062
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2062
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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