Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_B02
(654 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 118 1e-28
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 118 1e-28
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 118 1e-28
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 115 1e-27
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 6.4
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (285), Expect = 1e-28
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +1
Query: 103 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 282
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 283 GDEAFEATGY-SVKYPVRHGIVQDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 459
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 460 NRXYLAEIMFESFNVPGLYIAVQAVLALAASWKS 561
NR + +IMFE+FN P +Y+A+QAVL+L AS ++
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 28.7 bits (61), Expect = 0.17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 606 AGDGVTHIVPVAEGY 650
+GDGV+H VP+ EGY
Sbjct: 156 SGDGVSHTVPIYEGY 170
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (285), Expect = 1e-28
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +1
Query: 103 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 282
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 283 GDEAFEATGY-SVKYPVRHGIVQDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 459
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 460 NRXYLAEIMFESFNVPGLYIAVQAVLALAASWKS 561
NR + +IMFE+FN P +Y+A+QAVL+L AS ++
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 28.7 bits (61), Expect = 0.17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 606 AGDGVTHIVPVAEGY 650
+GDGV+H VP+ EGY
Sbjct: 156 SGDGVSHTVPIYEGY 170
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 118 bits (285), Expect = 1e-28
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +1
Query: 103 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 282
+ + A V+D G+G K GFAG+ P+ + PS VG + + + D ++
Sbjct: 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYV 55
Query: 283 GDEAFEATGY-SVKYPVRHGIVQDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 459
GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 460 NRXYLAEIMFESFNVPGLYIAVQAVLALAASWKS 561
NR + +IMFE+FN P +Y+A+QAVL+L AS ++
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 28.7 bits (61), Expect = 0.17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 606 AGDGVTHIVPVAEGY 650
+GDGV+H VP+ EGY
Sbjct: 156 SGDGVSHTVPIYEGY 170
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 115 bits (277), Expect = 1e-27
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Frame = +1
Query: 103 DHLPACVIDVGTGYTKLGFAGNKEPQFIIPSTIAIKETAKVGDQSTRRMTKAVEDLDFFI 282
D A V+D G+G K GFAG+ P+ + PS VG + + + + D ++
Sbjct: 4 DDAGALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGNKDAYV 55
Query: 283 GDEAFEATGY-SVKYPVRHGIVQDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 459
GDEA G ++KYP+ HGI+ +WD ME+ + LR PE+H L+TE PLN
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKS 115
Query: 460 NRXYLAEIMFESFNVPGLYIAVQAVLALAASWKS 561
NR + +IMFE+F P +Y+A+QAVL+L AS ++
Sbjct: 116 NREKMTQIMFETFAAPAVYVAIQAVLSLYASGRT 149
Score = 28.7 bits (61), Expect = 0.17
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 606 AGDGVTHIVPVAEGY 650
+GDGV+H VP+ EGY
Sbjct: 156 SGDGVSHTVPIYEGY 170
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 6.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 98 WETIYQLVLSMSAP 139
WE +YQLVL + P
Sbjct: 388 WENLYQLVLRSAGP 401
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,392
Number of Sequences: 2352
Number of extensions: 13210
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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