Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_A22
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 303 1e-84
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 293 1e-81
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 234 6e-64
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 201 5e-54
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 34 0.001
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 303 bits (743), Expect = 1e-84
Identities = 146/165 (88%), Positives = 146/165 (88%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 145
Query: 500 KQLIVXVNKMDSTEPPYSEPXFXXXXXXXXXXXXXXGYNPXAVAF 634
KQLIV VNKMDSTEPPYSE F GYNP AVAF
Sbjct: 146 KQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAF 190
Score = 54.8 bits (126), Expect = 7e-10
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGSL 144
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 293 bits (718), Expect = 1e-81
Identities = 141/165 (85%), Positives = 143/165 (86%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGV
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGV 145
Query: 500 KQLIVXVNKMDSTEPPYSEPXFXXXXXXXXXXXXXXGYNPXAVAF 634
KQLIV VNKMD T+PPYSE F GYN +VAF
Sbjct: 146 KQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAF 190
Score = 54.8 bits (126), Expect = 7e-10
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGSL 144
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 234 bits (572), Expect = 6e-64
Identities = 114/133 (85%), Positives = 114/133 (85%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 415
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 416 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPXFXXXXXXXXXX 595
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE F
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 596 XXXXGYNPXAVAF 634
GYNP AVAF
Sbjct: 121 IKKIGYNPAAVAF 133
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 201 bits (490), Expect = 5e-54
Identities = 98/117 (83%), Positives = 98/117 (83%)
Frame = +2
Query: 284 DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 463
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 464 REHALLAFTLGVKQLIVXVNKMDSTEPPYSEPXFXXXXXXXXXXXXXXGYNPXAVAF 634
REHALLAFTLGVKQLIV VNKMDSTEPPYSE F GYNP AVAF
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAF 117
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.3 bits (75), Expect = 0.001
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 323 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 502
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 503 QLIVXVNKMD 532
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 26.2 bits (55), Expect = 0.28
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGSL 144
K H + ++GHVD GK+T +L
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 85 INIVVIGHVDSGKST 129
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 308 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 308 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,509
Number of Sequences: 438
Number of extensions: 3158
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -