Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_A18
         (459 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    62   5e-10
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    62   5e-10
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    57   1e-08
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    32   0.32 

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +1

Query: 133 RAQCTQVKVEFIGETSRQIIXNVKGPVRDGDILT 234
           + QCTQVKVEF+GE +RQII NVKGPVR+GDILT
Sbjct: 20  QGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +3

Query: 75  MDKPNVLARVVKVLGRTGSQG 137
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +1

Query: 133 RAQCTQVKVEFIGETSRQIIXNVKGPVRDGDILT 234
           + QCTQVKVEF+GE +RQII NVKGPVR+GDILT
Sbjct: 20  QGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +3

Query: 75  MDKPNVLARVVKVLGRTGSQG 137
           MDKP V ARV+KVLGRTGSQG
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = +1

Query: 133 RAQCTQVKVEFIGETSRQIIXNVKGPVRDGDILT 234
           + QCTQV+VEF+G+ SRQII NVKGPVR GDIL+
Sbjct: 19  QGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52



 Score = 33.9 bits (74), Expect = 0.11
 Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 75  MDKPNVLARVVKVLGRTGSQGPVYSSEGRVHW-GDQ 179
           MDKP   ARVV++LGRTGSQG    ++ RV + GDQ
Sbjct: 1   MDKPQY-ARVVEILGRTGSQG--QCTQVRVEFLGDQ 33


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 109 KCLAVLVLRAQCTQVKVEFIGETSRQIIXNVKGPVRDGDI 228
           K L  +  R   T+V+V+ + +   Q +  VKGPVR GD+
Sbjct: 11  KILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,328,011
Number of Sequences: 53049
Number of extensions: 309653
Number of successful extensions: 913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)