Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_A13
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0628 - 25643006-25643123,25643314-25643471,25643559-256436...    62   3e-10
01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336...    28   7.5  
06_01_1128 + 9300144-9300273,9300340-9300472,9300585-9300656,930...    27   9.9  

>11_06_0628 -
           25643006-25643123,25643314-25643471,25643559-25643687,
           25644378-25644451,25644771-25644798
          Length = 168

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
 Frame = +2

Query: 185 W*REHRADIXIEGFNPSAEEA--DEGTDSAVESGVDIXLNHRLVETYAFGDXXXXXXXXX 358
           W  +   D+ I G NPSAE    DEG D      VDI    RL E   F           
Sbjct: 35  WVVQGAIDVDI-GANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKR 93

Query: 359 XXXXXXXXXXEXKAPDQXEXFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYXD 538
                       K     E FK N+    K +LG+ K+LQFF GESM  DG +    Y  
Sbjct: 94  YIKNLSAKLDAEKQ----EEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYK- 148

Query: 539 FDGTQIPIMMFFKHGLQXXK 598
            DG   P  ++F HGL+  K
Sbjct: 149 -DGATDPTFLYFSHGLKEVK 167


>01_05_0078 +
           17931998-17932062,17933320-17933416,17933506-17933601,
           17933957-17933988,17935143-17935595,17935831-17935975,
           17936058-17936159,17937798-17937890,17939448-17939489,
           17940092-17940202,17940446-17940517,17940596-17940714,
           17940981-17941044,17941133-17942782
          Length = 1046

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 582 PCL-KNIMIGICVPSKSXYSIMATMPSQSIDSPV 484
           PCL K+   GI  P+K    ++ TMPS S  + +
Sbjct: 200 PCLLKDASTGITKPAKEQGKLLVTMPSSSTSTKI 233


>06_01_1128 +
          9300144-9300273,9300340-9300472,9300585-9300656,
          9300783-9300926,9301453-9301524,9301584-9301677,
          9301782-9301928
          Length = 263

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 31 EKPFFRFLLFLIASNPS 81
          E PFF FLL L++S+PS
Sbjct: 2  EAPFFFFLLLLVSSSPS 18


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,516,623
Number of Sequences: 37544
Number of extensions: 250497
Number of successful extensions: 520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)