Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_A11
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    60   1e-09
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    60   1e-09
U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myos...    28   5.4  
U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myos...    28   5.4  
U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myos...    28   5.4  
U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myos...    28   5.4  
M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein ( D.me...    28   5.4  
AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-P...    28   5.4  
AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-P...    28   5.4  
AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-P...    28   5.4  
AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-P...    28   5.4  
AY075191-1|AAL68060.1|  623|Drosophila melanogaster AT13424p pro...    27   9.5  
AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA...    27   9.5  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +1

Query: 88  KTF*LTARRKDAKSVKIKKNPENVKFKVRCSRFLYTL 198
           K F   ARR DA++VKIKKNP N KFK+RCSRFLYTL
Sbjct: 9   KDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTL 45



 Score = 36.7 bits (81), Expect = 0.012
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 200 LITDKEKAXKLKQSLPPGLQ 259
           ++ DKEKA K+KQSLPPGLQ
Sbjct: 46  VVQDKEKADKIKQSLPPGLQ 65


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +1

Query: 88  KTF*LTARRKDAKSVKIKKNPENVKFKVRCSRFLYTL 198
           K F   ARR DA++VKIKKNP N KFK+RCSRFLYTL
Sbjct: 9   KDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTL 45



 Score = 36.7 bits (81), Expect = 0.012
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 200 LITDKEKAXKLKQSLPPGLQ 259
           ++ DKEKA K+KQSLPPGLQ
Sbjct: 46  VVQDKEKADKIKQSLPPGLQ 65


>U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 1972

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1848 KKIKELTMNIEDERRHVDQHKEQ 1870


>U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2012

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1888 KKIKELTMNIEDERRHVDQHKEQ 1910


>U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2017

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1893 KKIKELTMNIEDERRHVDQHKEQ 1915


>U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2057

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1933 KKIKELTMNIEDERRHVDQHKEQ 1955


>M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein (
            D.melanogaster non-musclemyosin heavy chain mRNA. ).
          Length = 1972

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1848 KKIKELTMNIEDERRHVDQHKEQ 1870


>AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-PB,
            isoform B protein.
          Length = 2011

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1887 KKIKELTMNIEDERRHVDQHKEQ 1909


>AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-PC,
            isoform C protein.
          Length = 1971

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1847 KKIKELTMNIEDERRHVDQHKEQ 1869


>AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-PA,
            isoform A protein.
          Length = 2056

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1932 KKIKELTMNIEDERRHVDQHKEQ 1954


>AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-PD,
            isoform D protein.
          Length = 2016

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 78   KDIKDFLINGEEERRQIGQNKEE 146
            K IK+  +N E+ERR + Q+KE+
Sbjct: 1892 KKIKELTMNIEDERRHVDQHKEQ 1914


>AY075191-1|AAL68060.1|  623|Drosophila melanogaster AT13424p
           protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +2

Query: 44  KLFVFNM-PR*NQRYQRLFN*--RRGGKTPNRSK*RRTLRM--SSSRFDAQGSCTPWLIT 208
           K++ F+  P  N+ YQR      R       R + R TL++  S SR  A G CT +  +
Sbjct: 32  KIYRFSSDPEYNRVYQRYMATLIRVQNSMHRRFQSRTTLKLQGSHSRLSAGGFCTKFNKS 91

Query: 209 DKEKAXKLKQS 241
            KEK  K  QS
Sbjct: 92  GKEKKNKHNQS 102


>AE014134-769|AAF50984.2|  622|Drosophila melanogaster CG15631-PA
           protein.
          Length = 622

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +2

Query: 44  KLFVFNM-PR*NQRYQRLFN*--RRGGKTPNRSK*RRTLRM--SSSRFDAQGSCTPWLIT 208
           K++ F+  P  N+ YQR      R       R + R TL++  S SR  A G CT +  +
Sbjct: 32  KIYRFSSDPEYNRVYQRYMATLIRVQNSMHRRFQSRTTLKLQGSHSRLSAGGFCTKFNKS 91

Query: 209 DKEKAXKLKQS 241
            KEK  K  QS
Sbjct: 92  GKEKKNKHNQS 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,822
Number of Sequences: 53049
Number of extensions: 176389
Number of successful extensions: 520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)