Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_A10
(599 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 71 2e-13
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 34 0.014
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 0.30
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 27 2.8
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 27 2.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 4.8
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 4.8
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 6.4
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 25 6.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.4
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 8.5
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 25 8.5
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 70.5 bits (165), Expect = 2e-13
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Frame = +1
Query: 199 VCFDVXSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFXEALXKRLDIIRP-NVGQ 375
V FD+ ST+IQ E IDELA G EV +T+ AM G + F E+L +R+ +++ +V
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 376 IREFIXKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 555
I + I K + TPG +L L + G + + SGGF + E V +L++ +AN L
Sbjct: 139 INKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLD--YAYANVL 194
Query: 556 KFYFNGEY 579
+F +G++
Sbjct: 195 EFSDDGKF 202
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 34.3 bits (75), Expect = 0.014
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = -1
Query: 464 TMTPLSCNSFTNSVIPGVSLTGNXSMNSLI*PTLGLMMSSLXFNASWNVILPPIASAVSL 285
T TP++ ++ NS P SLT ++NS P + SS N+S PI S+ +
Sbjct: 2552 TSTPITSSTVVNSSTPITSLT---ALNSST-P----ITSSSVLNSS-----TPITSSTVV 2598
Query: 284 LTSSPFPQN-LASSSMPSSCMTVEXTSKQ-TQSAVLNNSWTVC*GDITLIDTSESV 123
TS+P + + +SS P + T TS T S+VLN+S + T ++TS S+
Sbjct: 2599 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT--SSTALNTSTSI 2652
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 0.30
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Frame = -1
Query: 545 AKMLIVGMFSLSATGS--IRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNXSMNSLI* 372
+ LI+ F+ S S ++ + P T + +S +S ++ I S N +++S +
Sbjct: 440 SSFLIISTFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQ 499
Query: 371 P------TLGLMMSSLXFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXT 210
T+ + S+ ++ S N PI + SL S FP + SSS S ++ T
Sbjct: 500 SSQSSQFTVSVPSSTQSYSTSSN-FTTPITISTSL---SSFPTTIVSSSFQYSSLSSNVT 555
Query: 209 SKQTQSAVLNNS 174
+ QS+ L++S
Sbjct: 556 TTNAQSSSLSSS 567
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 584 PXYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPE 474
P P + N++ L + ++ + S SA GS+R PPE
Sbjct: 68 PTEVPSRANIAALKSLGVLAIVSFSAVGSLREDIPPE 104
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 317 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXTSKQTQSAVLNNSWTV 165
+L I A++LLT P +S+ SC + K ++ +LN T+
Sbjct: 334 LLMEITKAIALLTQLKVPAPTFKTSVSISCSNFDSQIKYLENVLLNALGTI 384
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 485 NPPETRYTMTPLSCNSFTNSVIPGVSLTGNXS 390
+P ET TMT +C+S I VS T S
Sbjct: 566 SPEETTTTMTTTTCSSRPEETISTVSTTSTVS 597
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 4.8
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 521 FSLSATGSIRLLNPPETRYTMTPLSCN-SFTNSVIPGVSLTGNXSMNSLI*PTLGLMMSS 345
+++S+ S + P+T +T + S + T S I S++ SMNS + +SS
Sbjct: 761 YTISSNSSQNSASEPQTAFTSSSSSATPTITQSSI-STSVSSQSSMNS----SYSSPISS 815
Query: 344 LXFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMT 222
+S ++I IAS S TS P ++ASS +S T
Sbjct: 816 NSVTSSTSII-SSIAS--SSYTSIPSISSIASSFFDASGFT 853
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 326 WNVILPPIASAVSLLTSSPF--PQN 258
WN++LP + +A+ ++ F PQN
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 552 SISEDVDSWD 523
S+SEDVDSWD
Sbjct: 182 SVSEDVDSWD 191
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 6.4
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = -1
Query: 512 SATGSIRLLNPP----ETRYTMTPLSCNSFTNSVIPGVSLTGNXSMNSLI*PTLGLMMSS 345
++T S + PP T +PL S + + + G+ S+++ I PT+ +S
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTS 257
Query: 344 LXFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSS 231
S ++ +PP +++ + SSP P S + +S
Sbjct: 258 -----STSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS 290
Score = 25.0 bits (52), Expect = 8.5
Identities = 24/87 (27%), Positives = 42/87 (48%)
Frame = -1
Query: 458 TPLSCNSFTNSVIPGVSLTGNXSMNSLI*PTLGLMMSSLXFNASWNVILPPIASAVSLLT 279
T SC + T+ IP G+ S+++ I PT+ +S S ++ +PP +++ +
Sbjct: 168 TSTSCTTSTS--IPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTN 218
Query: 278 SSPFPQNLASSSMPSSCMTVEXTSKQT 198
SSP P S + +S T +S T
Sbjct: 219 SSPLPTTSTSCTTSTSIPTGGSSSLST 245
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 6.4
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Frame = -1
Query: 596 FSSKPXYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIP 417
F++K SP+ + K S+ + G+ ++ PP T PLS + TN+
Sbjct: 201 FNAKSDDSPVVKSPGSNDKPSASPRISVRSLGNSSVVRPPTRTSTTRPLSRVNVTNA--- 257
Query: 416 GVSLTGNXSMNSLI*PTLGLMMSSLXFNASWNVILPPIASAVSLLTSSPFPQNLASSSM- 240
+G+ S NS S + NAS ++ P A+ S F +N AS++
Sbjct: 258 ----SGSISKNS-------TSPSKVKVNASTKIVRPVSAAQTVRPGSRIFRENSASNTQR 306
Query: 239 PSSCMTVEXTSKQTQS 192
P+ T T + S
Sbjct: 307 PNVSATSNSTVRVASS 322
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 6.4
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = -1
Query: 449 SCNSFTNSVIPGVSLTGNXSMNSLI*PTLGLMMSSLXFNASWNVILPPIASAVSLLTSSP 270
+C++ T S +S +G S S+ +G SS F S + P +S+ S +SSP
Sbjct: 110 ACSTCTIST-SSLSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSP 165
Query: 269 FPQNLASSSMPSSCMTVEXTSKQTQSA 189
+ SSS S + +SK + S+
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSS 192
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 314 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXTSKQTQSAVLNNSWT 168
LP + AVS +SS P + S+S +S + K T S SWT
Sbjct: 196 LPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLKKFYSWT 244
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 284 LTSSPFPQNLASSSMPSSCMTVEXTSKQTQSAVLNNSW 171
L + FP AS S+P M E TS++T S N +
Sbjct: 144 LARAAFPDQEASISIPWYIMVSECTSEETISFFKENDF 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,991
Number of Sequences: 5004
Number of extensions: 36727
Number of successful extensions: 143
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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