Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_A10
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0457 - 23800451-23800576,23801259-23801312,23801390-238015... 153 8e-38
12_02_0452 - 19188601-19188726,19189364-19189417,19189493-191896... 106 1e-23
01_05_0314 - 20779862-20780286,20780734-20781286 33 0.13
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 32 0.40
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 30 1.6
03_06_0421 - 33797836-33797992,33798450-33798549,33798646-337987... 29 2.2
09_02_0456 - 9525067-9525422,9525679-9528226 28 5.0
02_02_0109 + 6830802-6833412,6833491-6833861 28 5.0
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 5.0
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 28 6.6
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 27 8.7
03_02_0139 - 5844107-5844278,5844413-5844521,5844630-5844732,584... 27 8.7
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 27 8.7
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 27 8.7
>11_06_0457 -
23800451-23800576,23801259-23801312,23801390-23801539,
23801919-23802012,23802460-23802567,23802661-23802793,
23802903-23803139,23803488-23803586,23804968-23804983
Length = 338
Score = 153 bits (372), Expect = 8e-38
Identities = 76/145 (52%), Positives = 96/145 (66%)
Frame = +1
Query: 157 PQQTVQELFRTADCVCFDVXSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFXEAL 336
P + V E + AD VCFDV STV DEGIDELA FCG G V TA+AM G + F EAL
Sbjct: 115 PSKGVLETWCNADAVCFDVDSTVCLDEGIDELADFCGAGKAVAEWTAKAMTGTVPFEEAL 174
Query: 337 XKRLDIIRPNVGQIREFIXKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAER 516
RL +I+P + Q+ + + K P R++PGI +L+K+L V+LVSGGFR +I+PVA
Sbjct: 175 AARLSLIKPYLSQVDDCLVKRPPRISPGIADLIKKLKANNTDVFLVSGGFRQMIKPVASE 234
Query: 517 LNIPTINIFANRLKFYFNGEYXGFD 591
L IP NI AN+L F +GEY GFD
Sbjct: 235 LGIPPENIIANQLLFGTSGEYAGFD 259
>12_02_0452 -
19188601-19188726,19189364-19189417,19189493-19189642,
19189994-19190087,19190607-19190710
Length = 175
Score = 106 bits (255), Expect = 1e-23
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = +1
Query: 304 MGGNMTFXEALXKRLDIIRPNVGQIREFIXKFPVRLTPGITELVKELHERGVIVYLVSGG 483
M G++ F +AL RL + +P++GQ+ + + K P R++PGI ELVK L + V VYLVSGG
Sbjct: 1 MTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGIAELVKMLKAKNVDVYLVSGG 60
Query: 484 FRSLIEPVAERLNIPTINIFANRLKFYFNGEYXGFD 591
FR +I+PVA +L IP NIFAN+L F +GEY GFD
Sbjct: 61 FRQMIKPVAMQLGIPPENIFANQLLFGTSGEYVGFD 96
>01_05_0314 - 20779862-20780286,20780734-20781286
Length = 325
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = -3
Query: 363 RPDDVQSLXQRFXECHIAAHCFRR*SFNLVSFPAELGQFIDAFILYDGRVYIEANAVRCP 184
+P D++ L +++ H+ A +R S N++ +++D F+ R E
Sbjct: 166 KPKDLKELKEQYLLAHLVAGHWRMAS-NIL-------EYVDNFLFQSLREKDEEEVRIAM 217
Query: 183 EQLLDSLLRRHHADRHQ*ERLQRRVLQVA 97
++L D L ++HH +H R+ +L +A
Sbjct: 218 QRLQDDLQKKHHGSQHSVRRIAHELLGIA 246
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 100 NLQYATLKTLSLVSISVMSPQ-QTVQELFRTADCVCFDVXSTVIQDEGIDELAKFCGKGD 276
N Q T LV +SP Q +++ R AD + +T++QDE + +K K
Sbjct: 536 NSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEIWENGSKVIEKAS 595
Query: 277 EVKRLTAEAMGGNMTFXE 330
V L A GN T E
Sbjct: 596 GVHALLRIAEAGNSTSQE 613
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 320 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXTSKQTQSA-VLNNS 174
V+ PP +S + + SSP +N + SMPSS T E S T +A VL+ S
Sbjct: 486 VLAPPSSS--NAVESSPKIENSGTKSMPSSQHTSESDSATTSAAQVLDKS 533
>03_06_0421 -
33797836-33797992,33798450-33798549,33798646-33798700,
33798965-33799085,33799759-33799856,33800004-33800105,
33800196-33800360,33800441-33800522,33800960-33801117,
33801214-33801339,33801533-33801616,33802011-33802100,
33802188-33802258,33803420-33803513,33803585-33803671,
33804258-33804306,33805450-33805538,33805691-33805756,
33806009-33806071,33806174-33806282,33806376-33806446,
33807212-33807298,33807390-33807535,33808848-33808953,
33809429-33809494,33809672-33809741,33810839-33811206
Length = 959
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 127 LSLVSISVMSPQQTVQELFRTADCVCFDVXSTVIQDEGIDELAKFCGKGDEVKR 288
+ ++S+ + +P+ T+QEL F T++ ++GI E K G+G V R
Sbjct: 268 VDVLSVMIENPEATLQELLECMPGPDFPTGGTIVGNQGILEAYK-TGRGRVVMR 320
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 575 SPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGV 411
SPL NL LA + ++ + + S TGSI T LS N+ T + P +
Sbjct: 192 SPLPDNLGDLAALRVLFLANCSLTGSIPPSVGKLTNLVDLDLSSNNLTGEIPPSI 246
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 445 HERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 555
H++ +YL + GF IEP LN+ I++ +N L
Sbjct: 266 HKKLQNLYLYANGFTGEIEPNVSALNLVEIDVSSNEL 302
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 415 PGITELVKELHERGVIVYLVSGGFRSLIE 501
PG+ LVK LH GV + L S R I+
Sbjct: 93 PGVERLVKHLHRNGVPLALASNSVRRNID 121
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 368 TLGLMMSSLXFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSS-----CMTVEXTSK 204
+LG +M+SL + +LPP+ S + ++PF NL S+ + ++ C T+ S
Sbjct: 319 SLGELMNSLKVS-----VLPPLGSMIITSIAAPFADNLISNGVDTTKVRKICQTIAFLSP 373
Query: 203 QT 198
T
Sbjct: 374 AT 375
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 533 IVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSL 405
I G + TG +R NP + +SCN + V+P + L
Sbjct: 146 IPGEIRFAGTGDLRFFNPSSHDTLILLISCNKTGHLVLPPIFL 188
>03_02_0139 -
5844107-5844278,5844413-5844521,5844630-5844732,
5844834-5844865,5845211-5845434,5845774-5845889,
5845997-5846252,5846720-5846807,5846891-5846962,
5847096-5847171,5847302-5847360,5848202-5848268,
5848760-5848825,5850466-5850657
Length = 543
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 463 VYLVSGGFRSLIEPVAERLNIPTINIFAN 549
+Y+V G RSL+ V ER N P + I N
Sbjct: 422 LYIVPRGMRSLMNYVKERYNSPPVYITEN 450
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 311 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXTSKQTQSA 189
PPI+S++SL+ S+P P + P +TV S + S+
Sbjct: 4 PPISSSLSLMASNPIPS--PPVAKPGRPLTVAACSNSSSSS 42
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -1
Query: 353 MSSLXFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEXTSKQTQSA 189
+SS F+ S L ++S +L +PF ++A S+ PSS T T QT S+
Sbjct: 182 ISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPT-GSTPTQTPSS 235
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,419
Number of Sequences: 37544
Number of extensions: 247827
Number of successful extensions: 745
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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