Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_A10
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   10.0 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   10.0 

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +3

Query: 90  FEKQPAVRDVEDALTGVDQRDVASTDCPGVVQ 185
           + +   ++++   +T + +R++ STD  GVV+
Sbjct: 158 YAQHSQIKNIRAKMTAIIKREITSTDLKGVVE 189


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 12  AWCFDNITRV*IGNYRIISILIALAQFEKQPAVRDV 119
           A CF+ + +   GNY  + IL +L       + RD+
Sbjct: 360 AQCFEKVLKAQPGNYETMKILGSLYATSSSQSKRDI 395


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 323 NVILPPIASAVSLLTSSPFPQNLASS 246
           N +LP I  + + LT +P   N+A+S
Sbjct: 169 NSVLPYITESPTDLTDAPTTSNMAAS 194


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 323 NVILPPIASAVSLLTSSPFPQNLASS 246
           N +LP I  + + LT +P   N+A+S
Sbjct: 170 NSVLPYITESPTDLTDAPTTSNMAAS 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,052
Number of Sequences: 2352
Number of extensions: 9970
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)