Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_A04
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    114   2e-27
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.6  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.6  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   7.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.6  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  114 bits (275), Expect = 2e-27
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +3

Query: 90  LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
           L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score =  114 bits (275), Expect = 2e-27
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +3

Query: 90  LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
           L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146



 Score =  114 bits (275), Expect = 2e-27
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +3

Query: 90  LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
           L+VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 59 VKTLTGKTITL 91
          VKTLTGKTITL
Sbjct: 5  VKTLTGKTITL 15



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 59  VKTLTGKTITL 91
           VKTLTGKTITL
Sbjct: 81  VKTLTGKTITL 91



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 59  VKTLTGKTITL 91
           VKTLTGKTITL
Sbjct: 157 VKTLTGKTITL 167


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 530 LEGTYLXVVVFEDHRAMTLPAVVTVLHHR 444
           L GTY   ++F    ++ L  VV   HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 530 LEGTYLXVVVFEDHRAMTLPAVVTVLHHR 444
           L GTY   ++F    ++ L  VV   HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 503 VFEDHRAMTLPAVVTVLHHRHE 438
           +F DHR    PA V  L   HE
Sbjct: 903 IFIDHRGHKAPAAVVGLQFLHE 924


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 53  FSVKTLTGKTITLAGRAVRYHRE 121
           FS+ T  GK +    RA+ Y R+
Sbjct: 218 FSISTSNGKGVVRLARALDYERQ 240


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 533 CKERSRLLCMMDLNKILTQCXSS 601
           C +RS  L   +  K+LTQC S+
Sbjct: 67  CPDRSEQLPSRNRPKLLTQCDSN 89


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 548 ASVPYRLEGTYLXVVVFEDHRAMTLPAVVTVLHHRHEHSG 429
           +S+  +L  T + V+ F DH+A+T+   +    +R  ++G
Sbjct: 207 SSLETQLRTTDMHVLSFSDHKALTVRLCLPTPPNRLTNNG 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,590
Number of Sequences: 2352
Number of extensions: 11956
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)