Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_A02
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 72 6e-14
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 33 0.035
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 31 0.14
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 30 0.33
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 0.57
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 29 0.75
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 29 0.75
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 29 0.75
SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po... 28 1.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.3
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 1.7
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 27 3.0
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 4.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 4.0
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 4.0
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 26 4.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.3
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 26 5.3
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 5.3
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 26 5.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 5.3
SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|... 25 7.0
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 25 7.0
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 25 7.0
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 7.0
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 25 7.0
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 25 9.3
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.3
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 9.3
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 25 9.3
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 25 9.3
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 9.3
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 9.3
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 72.1 bits (169), Expect = 6e-14
Identities = 40/137 (29%), Positives = 70/137 (51%)
Frame = +1
Query: 133 MAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAY 312
MAE+V +E + ELE + N++ +EI I + R+ FE + RR + D++ YI Y
Sbjct: 1 MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQY 60
Query: 313 ELALLEDITTRRKKIQLTEKKKDLEYAIAQRLNQLFKRFIYKFQNEIEIYFEYIKFCKGV 492
E+ L R K++ +T K +YA +++ LF R KF ++ ++ +YI + + +
Sbjct: 61 EINLETLRAKRHKRLNITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLDYIHYAQKI 120
Query: 493 GFQQAISGIIGQMLQIH 543
+ I LQ H
Sbjct: 121 KAVNIVGKICVAALQKH 137
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 33.1 bits (72), Expect = 0.035
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 136 AEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQ 300
AEQ+++++E + ELE + T E++++ K + FE +Q ++++D Q
Sbjct: 81 AEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQ 135
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 178 LEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQY 303
++QM TNL D+E S RK+++ I++R +ED ++
Sbjct: 1390 IKQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKF 1431
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 160 ENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQ 300
E + +L Q T L+TD+E K ++K E E + +R K+++ Y++
Sbjct: 1044 ERKVRDLLQKVMT-LHTDKEAKRKAKKAAEHERYHKRMQKEEQAYIE 1089
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.1 bits (62), Expect = 0.57
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +1
Query: 151 QRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQ----KEDYVQY---IA 309
Q + + +L++M + + DEE K +SQ++ + EY I Q E+Y ++ +
Sbjct: 629 QTLAQLHLQLDEMTQRLVSLDEESKAVSQRKLDLEYKINNSKTQLATATEEYHEHSKQLE 688
Query: 310 YELALLEDITTRRKKIQLTEK 372
E L + K + LTE+
Sbjct: 689 AEKQELSKLEDGLKSVNLTEE 709
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 28.7 bits (61), Expect = 0.75
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 232 SQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDI 336
S + +F Y ++ R+KQK ++ YE+ LE I
Sbjct: 162 SHSQSQFIYELEGRLKQKSSDFGWLPYEMRALETI 196
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.7 bits (61), Expect = 0.75
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 151 QRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLE 330
Q+I ELE + R +E+ + +KRK+ I + K +E+ + + L+ E
Sbjct: 333 QQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEHQSISKDFKSQEELISSLTTGLSTTE 392
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 28.7 bits (61), Expect = 0.75
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEE--IKEISQ---KRKEFEYHIQRRVKQKEDYVQY 303
+ + +R++ +++E +TN+ +++ IK++SQ K KEFE ++KQ +
Sbjct: 37 KNIERRVKKY-DQIESEYKTNIENEKKAFIKDVSQVQQKIKEFEIQKANQIKQLNEEKLS 95
Query: 304 IAYELALLEDITTRRKKIQLTEK 372
I LE I R + +Q EK
Sbjct: 96 IEARKQQLE-IEIRNQLLQYAEK 117
>SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 562
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = -3
Query: 241 VFGIFLLSLHLYISLFXSFAPAHLSYSQYVDLLVQPF-------LFISLYYFYYTKTLSY 83
+F IF+ S+ + I + F H YS V +++Q F +F+S + YY + +Y
Sbjct: 353 LFSIFMASMSVIIVVSEVFL--HTQYS-LVGIILQKFTNSSATSIFVSFLFVYYMRYCTY 409
Query: 82 KS 77
KS
Sbjct: 410 KS 411
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 1.3
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 130 KMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
K + N R++ + ELE + N EI ++ ++ + I K+K+ + +
Sbjct: 492 KALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELE 551
Query: 310 YELALLE-DITTRRKKI-QLTEKKKDLEYAIAQRLNQLFKRFIYKFQNEIEIYFEYI 474
+ E +++ I + K KD E + N++ F YK N++ + E I
Sbjct: 552 QRIKSYEVNVSELNGTIDEYRNKLKDKE----ETYNEVMNAFQYK-DNDLRRFHESI 603
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -3
Query: 286 LFV*LSFVCDIQTLFVFGIFLLSLHLYISLF------XSFAPAHLSYSQYVDLLVQPFLF 125
LF L FVC ++ +LH ++ LF F L Y + ++ F +
Sbjct: 17 LFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYHHHHTFTIEAFFY 76
Query: 124 ISLYYFYY 101
++F++
Sbjct: 77 WFFFFFFF 84
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -3
Query: 307 RCIEHNLLFV*LSFVCDIQTLFVFGIFLLSLHLYISLFXSFAPAHLSYSQYVDLLVQPFL 128
+C + +LF L F ++ FVF L SL L + F + Y + + PFL
Sbjct: 269 KCSKKQILFSLLYFSSEVYLSFVFWSVLTSLGLLVWYFPLWHMGISGYEACILFELSPFL 328
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 142 QVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQ--KEDYVQYIAYE 315
Q NQR N+I+ L N+Y E E + F Y + R + + + D + I Y+
Sbjct: 359 QPNQRPANLIDALNATSSDNVYFLREEGENALDASAFHYSVYRIILRFLRMDGLMEIPYD 418
Query: 316 L 318
L
Sbjct: 419 L 419
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 211 DEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITT--RRKKIQLTEKKKDL 384
D +IK +S K+K+FE + DY ++ L+ E T+ + K+ + KK+D
Sbjct: 351 DTDIKNVSTKKKDFE-------ETSRDYYTSLSRYLSKSEKETSSDKTKESKFAAKKRDF 403
Query: 385 E 387
E
Sbjct: 404 E 404
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 4.0
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Frame = +1
Query: 130 KMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
K E + ++ N ELE + N E+ +KRK++E + + D QY
Sbjct: 514 KEVEALQLQLVNSSTELESVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQYYR 573
Query: 310 YELALLEDITTRRKKIQLTEKKKDLEY-AIAQRLNQLFKRFIYKFQNEIEIYF 465
+ + + + + K+ + + + L + + F F +E YF
Sbjct: 574 ESKEYIASLYEKLDRTERNNKENENNFWNLKFNLLTMLRSFHGSFTDETNGYF 626
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 328 EDITTRRKKIQLTEKKK 378
ED+TT R+KI +T K+K
Sbjct: 595 EDLTTSRRKIGITSKRK 611
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 241 RKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQ 360
RKE E ++RR K+K++ + Y++A E RRK I+
Sbjct: 292 RKEME-QMKRRTKEKKEMKRRALYDIASDEKDFRRRKIIR 330
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 533 NICPMIPEIACWNPTPLQNFIYS 465
N+CP+ + C P+Q+FI S
Sbjct: 487 NVCPLNLNVCCCIAEPIQSFILS 509
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/87 (21%), Positives = 40/87 (45%)
Frame = +1
Query: 130 KMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
K+A Q + +EN N + + TDE + + +K + EY +Q +++ Y Q
Sbjct: 620 KLAAQRDAAVENA-NYSRSLIQKKT-TDETVGSLIEKVGKLEYEVQGTLEEATSYYQKNT 677
Query: 310 YELALLEDITTRRKKIQLTEKKKDLEY 390
LL+ + + ++ +K ++Y
Sbjct: 678 ELQQLLKQNESASELLKSRNEKLCVDY 704
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 QKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEY-AIAQRLNQLFKR 426
+K+D VQ + ++ R++ I + + +KD +Y +I Q+L QL+ +
Sbjct: 401 KKDDGVQSASLNASMSARSHARQRSIHVPKTRKDTDYESIHQKLLQLWSQ 450
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 163 NMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKE 288
N N + R + DEE K K+ F+ H Q ++ Q++
Sbjct: 815 NAYNRISTFLRMQI--DEECKPCQFKKSNFKEHFQNKIYQEQ 854
>SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 136 PFLFISLYYFYYTKTLSYKSG 74
P LFI+++YFY T T + G
Sbjct: 130 PILFIAIFYFYETWTKACGKG 150
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 7.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 214 EEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEKKKD 381
EEIK+IS K++ V + E+ + + + +D T+ KK + TEKK+D
Sbjct: 8 EEIKDISSKQEN-----SSEVPKAEEAGKVVESQ----KDTTSEEKKEETTEKKED 54
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 7.0
Identities = 19/89 (21%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 127 IKMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHI-QRRVKQKEDYVQY 303
+K + ++IE + +E +++ + DEE +++ + +EF ++ Q ++K+ QY
Sbjct: 196 MKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQFQIKKLSLERQY 255
Query: 304 IAYELALLEDITTRRKKIQLTEKKKDLEY 390
L E + + +K+Q D+ Y
Sbjct: 256 DCANLE-FEHNSRKLEKLQKMNVFSDIFY 283
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 471 ILKIYFNFILELINKTLEKLV*TLSNGILQILF 373
ILK FN + + + +EKL+ ++S +L++ F
Sbjct: 630 ILKRIFNSLTSINDSNIEKLLESISYSLLKLFF 662
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 193 RTNLYTDEEIKEIS-QKRKEFEYHIQRRVKQKEDYVQYIAYEL 318
+ N+ EE++E +KRKEFE I+R +++Y +EL
Sbjct: 39 KINITDLEELQEFQGRKRKEFEDAIRRNRLAMGHWMRYGQWEL 81
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 524 DKCCRYMVINLXVVDGERMGE 586
D+CCRY+V ++ R+GE
Sbjct: 1045 DECCRYIVALSCELERRRLGE 1065
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 545 PCICNICPMIPEIACWNPTP 486
PC C + P +AC P P
Sbjct: 621 PCTCGRTRLYPPVACGTPIP 640
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.0 bits (52), Expect = 9.3
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 202 SLFXSFAPAHLSYSQYVDLLVQPFLFISLYYFYYT--KTLSYKSGGIKILTSPQSSSVCL 29
+LF F ++ S+Y+ + + F+SL FY++ + + ++ TS S+ V L
Sbjct: 155 ALFVIFDNGLITMSRYIMIEIPALYFMSLTAFYWSVYEAQQKRPFSLRWHTSLLSTGVAL 214
Query: 28 ELAI 17
LA+
Sbjct: 215 GLAL 218
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 253 QTLFVFGIFLLSLHLYISLFXSFAPAHLSYSQYVDLLVQPFLFISLY 113
+++ VF L ++H + +LF F +S Y D+L+ L IS Y
Sbjct: 223 KSINVFFFILFAVH-WFALFPIFRKYIHVFSFYADMLMTLVLIISAY 268
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 211 DEEIKEISQKRKEFEYHIQRRVKQKE-DYVQYIAYELA 321
D+EIK++ + F + +V +KE D+V+ A E+A
Sbjct: 256 DKEIKKLGVRNGYFPLFVSSKVLEKEKDHVEGFAPEVA 293
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.0 bits (52), Expect = 9.3
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHI---QRRVKQKEDYVQYIA 309
E +N+RI +EL M N E+K QK + I + K+ + + +
Sbjct: 830 ETLNERISAAADELSSMESINKNQANELKLAKQKCSNLQEKINFGNKLAKEHTEKISSLE 889
Query: 310 YEL-ALLEDITTRRKKIQLTEKKKD 381
+L A + +T K+++ + + D
Sbjct: 890 KDLEAATKTASTLSKELKTVKSEND 914
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/52 (21%), Positives = 26/52 (50%)
Frame = +1
Query: 151 QRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYI 306
++IE + E++++ ++ + D+EIK + + + +KE V I
Sbjct: 790 EKIEEKLTEVDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKI 841
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,667,112
Number of Sequences: 5004
Number of extensions: 55095
Number of successful extensions: 210
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -