Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_A02
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35637-5|CAE17723.1| 185|Caenorhabditis elegans Hypothetical pr... 33 0.23
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 32 0.30
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 32 0.40
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 31 0.93
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 30 1.2
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 30 1.2
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical... 30 1.6
Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 2.1
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 29 2.8
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 29 3.7
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 4.9
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 4.9
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 4.9
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 4.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 4.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 4.9
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 4.9
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 28 4.9
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 4.9
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.5
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 28 6.5
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 28 6.5
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 8.6
Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical p... 27 8.6
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 27 8.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 8.6
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 27 8.6
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 8.6
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 27 8.6
AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 27 8.6
>Z35637-5|CAE17723.1| 185|Caenorhabditis elegans Hypothetical
protein C03C10.7 protein.
Length = 185
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/96 (23%), Positives = 51/96 (53%)
Frame = +1
Query: 172 NELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRK 351
+E+E++ R N +E KE+ ++ +E E ++R + +E ++ +EL ++ +++ R
Sbjct: 35 SEIEELIRRNEKREEAKKEVKRRIEEEEKAKEQRKRDEE--IRRETHELLVIRELSNNRN 92
Query: 352 KIQLTEKKKDLEYAIAQRLNQLFKRFIYKFQNEIEI 459
I++ K + +R+N F+ F + EI I
Sbjct: 93 DIEMPSIPK-----LGRRVNN-FQYFKWDSDEEIPI 122
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 310 YELALLEDITTRRKKIQLTEKKKDLEYAIAQRLNQLFKRFIYKFQNE 450
++ AL+ ++ + RK QLT K+ Y+IA+ +N + F+NE
Sbjct: 453 FQSALIPNLLSTRKNRQLTNKELSQIYSIAKAINLSMSDLLKAFENE 499
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 103 NKSNIKI*IKMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQK-RKEFEYHIQRRVK 279
NK+ ++ I + + + E + + +T + +E+KE +K RKEFE I++
Sbjct: 25 NKAPAQLQITAEQLLREAKERELELIPPAPKTKITDPDELKEYQRKKRKEFEDGIRKNRM 84
Query: 280 QKEDYVQYIAYELALLE 330
Q ++++Y +E ++ E
Sbjct: 85 QLANWIKYGKWEESIGE 101
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 30.7 bits (66), Expect = 0.93
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Frame = +1
Query: 103 NKSNIKI*IKMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFE---YHIQRR 273
NK+ I I + IE MIN+ E+ D+++K+ ++ R E E Y+++ +
Sbjct: 525 NKNKITITNDQNRLSPEDIERMINDAEKFAED----DKKVKDKAEARNELESYAYNLKNQ 580
Query: 274 VKQKE------DYVQYIAYELALLEDIT-----TRRKKIQLTEKKKDLEYAIAQRLNQLF 420
++ KE D E A+ E I+ +L E+KKDLE + +++L+
Sbjct: 581 IEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLY 640
Query: 421 K 423
K
Sbjct: 641 K 641
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/109 (22%), Positives = 55/109 (50%)
Frame = +1
Query: 130 KMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
K+ E + Q E+ +N L + T +E+++ ++ K +++ ++ E ++ IA
Sbjct: 1015 KLLEDI-QAEEDKVNHLNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRKVEGELK-IA 1072
Query: 310 YELALLEDITTRRKKIQLTEKKKDLEYAIAQRLNQLFKRFIYKFQNEIE 456
EL +E++ + + + KKKD+E + Q + + + K Q +I+
Sbjct: 1073 QEL--IEELNRHKHEQEQVIKKKDIELSSIQSRLEDEQSLVAKLQRQIK 1119
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/73 (17%), Positives = 35/73 (47%)
Frame = +1
Query: 175 ELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKK 354
E+E + R+ Y +I ++ K + HI++ + + V L E++
Sbjct: 216 EIEDLKRSEAYAKSQISQLEDTVKSLKLHIEKIASENDQTVVVETLRLK-NEELLKENLN 274
Query: 355 IQLTEKKKDLEYA 393
+++ ++++ L++A
Sbjct: 275 LEMKQRQEQLDFA 287
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 232 SQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEYAIAQRLN 411
S ++EF I + +K+ DYVQ + E+A + + + KKD E + +
Sbjct: 221 SDVQEEFSKRIDQEIKRMSDYVQSVCLEIANKDKEYQKSFTALVAINKKDEETKCQEPVE 280
Query: 412 QLFK 423
++F+
Sbjct: 281 KIFE 284
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 214 EEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELA---LLEDITTRRKKIQLTEKKKDL 384
+E+ E + +++ F +Q+RV Q E+ ++ ELA LE +KK+Q +++D+
Sbjct: 605 DEVSEETPQKEAFGSKVQKRVAQWEEELEAEKEELAKKQKLEAEEEAKKKVQRV-RRRDI 663
Query: 385 EYAIA 399
E IA
Sbjct: 664 EKKIA 668
>AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical
protein Y43F8B.14 protein.
Length = 593
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 148 NQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALL 327
N + + EL Q+ T + E + + + F+ +R E +++ L LL
Sbjct: 152 NDKNDEQFQELCQLKATFRWCLTENHKQLRLAEFFDRRYKRETSDAEKFLEQA--NLFLL 209
Query: 328 EDITTRRK-KIQLTEKKKDLEYAIAQRLNQLF 420
D T RK K L + +KD + ++AQR + F
Sbjct: 210 SDETKSRKLKTSLKDHQKDFKKSLAQREKEPF 241
>Z78413-8|CAB01665.2| 541|Caenorhabditis elegans Hypothetical
protein T01C3.8 protein.
Length = 541
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 235 QKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEYAIAQRLNQ 414
+K KE+ ++ ++Q +D++ + + I +K++ + D +AQ
Sbjct: 196 KKIKEYIDKLKNEMEQLDDFISVLRFV------IINNAEKLKGNSEFADSLGRLAQTFES 249
Query: 415 LFKRFI--YKFQNEIEIYFEYIKFCKG 489
RFI Y F + + E ++FCKG
Sbjct: 250 SLTRFIFAYHFSSSVASLTETLEFCKG 276
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +1
Query: 103 NKSNIK-I*IKMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVK 279
++ NI+ + + M E ++ E + N Q+ L T E KE +++FE H Q +
Sbjct: 32 DRDNIEQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQ 91
Query: 280 QKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEYAIAQRLN 411
+ +Q + EL LL++ QL EK +++ A+R N
Sbjct: 92 E----LQTMTRELCLLKE--------QLLEKDEEIVELKAERNN 123
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +1
Query: 103 NKSNIK-I*IKMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVK 279
++ NI+ + + M E ++ E + N Q+ L T E KE +++FE H Q +
Sbjct: 32 DRDNIEQLMMNMLEDRDKLQEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQ 91
Query: 280 QKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEYAIAQRLN 411
+ +Q + EL LL++ QL EK +++ A+R N
Sbjct: 92 E----LQTMTRELCLLKE--------QLLEKDEEIVELKAERNN 123
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 217 EIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLEYAI 396
EI+EI+ K+ + ++ +K ++ + E L+D TT+RK++ +++ I
Sbjct: 599 EIEEITVKKNQGFMSLEAAASEKPINLKLLFEETTKLDDKTTKRKRVNRKKRESKKRRKI 658
Query: 397 AQ 402
Q
Sbjct: 659 EQ 660
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 130 KMAEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
KM +Q R++ ++ L E+K + QK E R +Q+ED +Q +
Sbjct: 345 KMIDQARARLQEAVDTLNGYEEFQ----SEMKSLEQKYSTAE----RDSRQEEDAIQKKS 396
Query: 310 YELALLEDITTRRKKIQLTEKKKDLEYAIAQRLN 411
YE+ LE+ +R + Q ++ + Y + Q +
Sbjct: 397 YEMRQLEN--KKRDEEQNSQLNRQDRYRVLQNFS 428
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 133 MAEQVNQRIENMIN-ELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIA 309
M E+V Q IE + E E+ + +T + ++ + KE E + KE+ +++I
Sbjct: 280 MQEEVVQNIERKLQFEREEQQELDSWTGKSLRAEGVEDKETEVLDKLMTLTKEEELEFIP 339
Query: 310 YELALLEDITTRRKKIQLTEKKK 378
E L+ + +K I T++KK
Sbjct: 340 QE-RRLDVLVNAQKTICETKEKK 361
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +1
Query: 106 KSNIKI*IKMAEQVNQRIENMINELEQMXRTNL---YTDEE---IKEISQKRKEFEYHIQ 267
+ N++I ++ ++ +RIE + E + + L +EE IKE +K+++ +
Sbjct: 493 EQNVRIDLEETLKLEKRIEEVSIEESKKKQEKLELKQREEEEARIKEEEEKQRKI-LEEE 551
Query: 268 RRVKQKEDYVQYIAYELALLEDITTRRKKIQLTEKKKD 381
R KQ+E+ + A E + + R+K+++ KKK+
Sbjct: 552 ARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKE 589
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 211 DEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
++E +E+SQK+ EFE I +K + + Q + Y+L LE+
Sbjct: 344 NQERQELSQKKTEFENRIS-SLKAEVIHCQSLKYDLERLEN 383
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 211 DEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
++E +E+SQK+ EFE I +K + + Q + Y+L LE+
Sbjct: 330 NQERQELSQKKTEFENRIS-SLKAEVIHCQSLKYDLERLEN 369
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 211 DEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
++E +E+SQK+ EFE I +K + + Q + Y+L LE+
Sbjct: 330 NQERQELSQKKTEFENRIS-SLKAEVIHCQSLKYDLERLEN 369
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 597 LCSNSPIRSPSTTLRFITMYLQHLSDDT*DSLLEPHTL 484
L S P+ S LRF+ +L HL + ++++EPH L
Sbjct: 640 LVSKLPV-SHVLLLRFLFAFLSHLCEFADENMMEPHNL 676
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRK--EFEYH-IQRRVKQKEDYVQY 303
+++N+R+EN++ E N E+ + K + E EY+ QRR+++KE ++Y
Sbjct: 665 DELNRRVENLLRE-------NNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRY 715
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRK--EFEYH-IQRRVKQKEDYVQY 303
+++N+R+EN++ E N E+ + K + E EY+ QRR+++KE ++Y
Sbjct: 738 DELNRRVENLLRE-------NNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRY 788
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRK--EFEYH-IQRRVKQKEDYVQY 303
+++N+R+EN++ E N E+ + K + E EY+ QRR+++KE ++Y
Sbjct: 738 DELNRRVENLLRE-------NNRLKSEVNPLKDKYRDLENEYNSTQRRIEEKETQIRY 788
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYEL 318
E+ +++ + +++ + +E+KE +KRK ++R+++ KE + E
Sbjct: 1055 EREKEKLNEELTTAKEIIQKQAKKIDELKEECRKRKNEASRLERKLEDKEAMMADCVKE- 1113
Query: 319 ALLEDITTRRKKIQLTEKKKDL--EYAIAQRLNQLFKRFIYKFQNEIEIYFEYIKFCKG 489
L+D R K ++ +K +D+ + + + N K I FQ E + +Y + G
Sbjct: 1114 --LKDSHKERLK-EMEQKVEDVKRKNSKLENENSTQKSQIETFQRESSVDSDYGRSSSG 1169
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -3
Query: 265 VCDIQTLFVFGIFLLSLHLYISLFXSFAPAHLSYSQYVDL--LVQPFLFISLYYFYYTKT 92
+C T+FVFG L + Y ++ + +P + +VD+ ++ P + L+YF K
Sbjct: 48 LCVAMTIFVFGYSFLREYFYFAVLDANSPKYPD-RFHVDMYDIIVPLITSFLFYF-ARKN 105
Query: 91 LSYKS 77
LS +S
Sbjct: 106 LSRQS 110
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRK-----EFEYHIQRRVKQKEDYVQY 303
E QR + + E E+ L +EEIK+ +Q+R+ +FE Q ++K++E+ Q
Sbjct: 199 ELQQQRHKQQLEEYEKRKEI-LRREEEIKQQNQEREKQINEDFEKRNQEKLKREEEIKQQ 257
Query: 304 IAYELALLEDITTRRKKIQLTEKK 375
+ D +RK +L +K
Sbjct: 258 NQEREKQINDDFEKRKLEKLQREK 281
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +1
Query: 172 NELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYV--QYIAYELALLEDITTR 345
N + + T EE+++ K++ EY ++ + ++E+ + Q E + ED R
Sbjct: 184 NRFPKQIPVAISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDFEKR 243
Query: 346 -RKKIQLTEKKKDLEYAIAQRLNQLF-KRFIYKFQNE 450
++K++ E+ K +++N F KR + K Q E
Sbjct: 244 NQEKLKREEEIKQQNQEREKQINDDFEKRKLEKLQRE 280
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/83 (21%), Positives = 43/83 (51%)
Frame = +1
Query: 154 RIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
R+EN ++ELEQ ++ Q + E E H ++ + + ED ++A ++ +E+
Sbjct: 1030 RLENQLHELEQ----------DLNRERQYKSELEQHKRKLLAELEDSKDHLAEKMGKVEE 1079
Query: 334 ITTRRKKIQLTEKKKDLEYAIAQ 402
+ QL ++ ++L++ + +
Sbjct: 1080 LNN-----QLMKRDEELQHQLTR 1097
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +1
Query: 136 AEQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKED 291
A + +R+E +N+ Q +E+ KE+ +K +++R++ + ED
Sbjct: 1834 ANRAARRLEKRLNDTTQQFEDEKRANEQAKELLEKSNLKNRNLRRQLDEAED 1885
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 283 KEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLE 387
KED+ ++ L+ED T+ R+K+ L+EK +LE
Sbjct: 767 KEDFEDFLDSYRFLMEDATSEREKM-LSEKADELE 800
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 283 KEDYVQYIAYELALLEDITTRRKKIQLTEKKKDLE 387
KED+ ++ L+ED T+ R+K+ L+EK +LE
Sbjct: 767 KEDFEDFLDSYRFLMEDATSEREKM-LSEKADELE 800
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/85 (17%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 130 KMAEQVNQ-RIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYI 306
++A+ N+ ++EN+ +E+M + ++E+K+I + + + ++++++ +
Sbjct: 732 ELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNVADITADMAPVIQERKEAEHTL 791
Query: 307 AYELALLEDITTRRKKIQLTEKKKD 381
A D ++ +K+Q K D
Sbjct: 792 AEIQKETRDFASKSQKLQNELSKYD 816
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/85 (17%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 130 KMAEQVNQ-RIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYI 306
++A+ N+ ++EN+ +E+M + ++E+K+I + + + ++++++ +
Sbjct: 732 ELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNVADITADMAPVIQERKEAEHTL 791
Query: 307 AYELALLEDITTRRKKIQLTEKKKD 381
A D ++ +K+Q K D
Sbjct: 792 AEIQKETRDFASKSQKLQNELSKYD 816
>Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical
protein C08H9.3a protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3
Query: 232 IFLLSLHLYISLFXSFAPAHLSYSQYVDLLVQPFLFISL-YYFYYTKTLSYKSGGIKILT 56
IFL+SL +I + A LSYS ++ +++ +L Y FYY SG + +
Sbjct: 168 IFLMSL-FFIDT-ERYLMAALSYSILLNFK-HIYVYYALGYVFYYLVNYFQFSGNVLLAN 224
Query: 55 SPQSSSVCLELAI 17
+P++ S+ + L I
Sbjct: 225 TPKAISLAIALLI 237
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 175 ELEQMXRTNLYTDEEIKEISQK--RKEFEYHIQRRVKQKEDYVQYI 306
E E + + +YTDEE+++ ++ +K+ + H Q V+Q Q +
Sbjct: 346 EWEDLGQKKVYTDEELQQFEREYAQKQEQQHPQEAVQQPPQAQQQV 391
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 154 RIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
++E + NEL+++ + +E K + + E E I K KE+Y Q I + +D
Sbjct: 3351 KVEPLRNELKRLEQEAAKKTQEGKVVDVRITELEESIG---KYKEEYAQLIGQAENIKQD 3407
Query: 334 ITTRRKKI 357
+ + ++K+
Sbjct: 3408 LLSVQEKV 3415
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = -1
Query: 186 LLQLIYHILNTLIYLFSHFYLYLYITFITQ 97
++++I+HI N L+ ++S +++Y+ F T+
Sbjct: 411 VIRVIHHISNLLLVIYSASTVFIYLIFSTK 440
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 154 RIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYELALLED 333
++E + NEL+++ + +E K + + E E I K KE+Y Q I + +D
Sbjct: 3351 KVEPLRNELKRLEQEAAKKTQEGKVVDVRITELEESIG---KYKEEYAQLIGQAENIKQD 3407
Query: 334 ITTRRKKI 357
+ + ++K+
Sbjct: 3408 LLSVQEKV 3415
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 175 ELEQMXRTNLYTDEEIKEISQK--RKEFEYHIQRRVKQKEDYVQYI 306
E E + + +YTDEE+++ ++ +K+ + H Q V+Q Q +
Sbjct: 349 EWEDLGQKKVYTDEELQQFEREYAQKQEQQHPQEAVQQPPQAQQQV 394
>AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical
protein K08D9.6 protein.
Length = 530
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = -3
Query: 247 LFVFGIFLLSLHLYISLFXSFAPAHLSYSQYVDLLVQPFLFISLYYFYYTKTLSYKSGGI 68
L++FGI S + + SF+P L S+++ L V +S YY+ Y+K+L + +
Sbjct: 48 LYIFGIPEPSSIAQV-VKDSFSPPALPVSEHL-LPVSHVFIVSAYYYPYSKSLGKNAVAL 105
Query: 67 KILTSPQS 44
++ ++
Sbjct: 106 NMVVDSKN 113
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/85 (20%), Positives = 43/85 (50%)
Frame = +1
Query: 139 EQVNQRIENMINELEQMXRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVQYIAYEL 318
EQ + IEN I E + EE++++ +++K + ++ ++++E+ +
Sbjct: 145 EQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKMKEALEKEEEEESFDE--- 201
Query: 319 ALLEDITTRRKKIQLTEKKKDLEYA 393
++++ +R KI+ + +K E A
Sbjct: 202 ---DEVSEKRAKIEKSTEKGGSEKA 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,342
Number of Sequences: 27780
Number of extensions: 302278
Number of successful extensions: 1146
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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