Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P24
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   251   6e-67
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   251   6e-67
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    45   8e-05
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    45   8e-05

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  251 bits (614), Expect = 6e-67
 Identities = 115/138 (83%), Positives = 130/138 (94%)
 Frame = +2

Query: 26  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 205
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 206 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRS 385
           GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYV EASKKEIKDIL QYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 386 LLVADPRRCEPKKFGGPG 439
           LLV DPRRCEPKKFGGPG
Sbjct: 121 LLVGDPRRCEPKKFGGPG 138


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  251 bits (614), Expect = 6e-67
 Identities = 115/138 (83%), Positives = 130/138 (94%)
 Frame = +2

Query: 26  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 205
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 206 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRS 385
           GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYV EASKKEIKDIL QYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 386 LLVADPRRCEPKKFGGPG 439
           LLV DPRRCEPKKFGGPG
Sbjct: 121 LLVGDPRRCEPKKFGGPG 138


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
 Frame = +2

Query: 77  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 253
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 254 GGHVAQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRSLLVADPRRCEPKKFGG 433
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 434 PG 439
            G
Sbjct: 384 EG 385


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
 Frame = +2

Query: 77  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 253
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 254 GGHVAQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRSLLVADPRRCEPKKFGG 433
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 434 PG 439
            G
Sbjct: 384 EG 385


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,140,080
Number of Sequences: 53049
Number of extensions: 537113
Number of successful extensions: 1474
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)