Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P24
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 202 2e-52
AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4 ... 30 1.0
AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin pro... 30 1.0
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 4.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 5.4
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 5.4
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 5.4
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 5.4
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 202 bits (492), Expect = 2e-52
Identities = 88/130 (67%), Positives = 114/130 (87%)
Frame = +2
Query: 50 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 229
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F V
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64
Query: 230 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVXEASKKEIKDILXQYDRSLLVADPRR 409
DIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYV E SK+E+K+I YD+SLLVADPRR
Sbjct: 65 DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRR 124
Query: 410 CEPKKFGGPG 439
E KKFGGPG
Sbjct: 125 RESKKFGGPG 134
>AF410936-1|AAL05561.1| 348|Caenorhabditis elegans ephrin EFN-4
protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 265 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 86
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 85 G 83
G
Sbjct: 208 G 208
>AF038619-2|AAB92075.2| 348|Caenorhabditis elegans Eph(f)rin
protein 4 protein.
Length = 348
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -1
Query: 265 YMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQSGLNQVQWAPVYTQHSMTTLAIRNCGG 86
YMTT+ + NHR + L E ++ L + S + + AP Q T A G
Sbjct: 148 YMTTSTGKANGTNHRMYGLCESQNMRLSMKVSASQPHPTRRAPTRRQEDFVTTASAELMG 207
Query: 85 G 83
G
Sbjct: 208 G 208
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 326 YVXEASKKEIKDILXQYDRSLLVADPRRCE 415
+ E +KE+ D+ QYDRS+ + D R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 205 RQGKILYG*HQSDSQ---GWWSCSTSLRYQTSYFKGSDRLLPEICXRSLK 345
R+ +I+ H + GW S L Y+T+Y + L P+ C L+
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFCLSFLE 308
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 259 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 161
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 199 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 318
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 399 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 438
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 199 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 318
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 662 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 701
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 259 TTTLDCHSDVNHREFFLAEQKD-RF--LKFVLQQSG 161
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical protein
F16D3.4 protein.
Length = 1232
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/72 (25%), Positives = 39/72 (54%)
Frame = +2
Query: 122 MLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISK 301
++ + P+D + R + ++L+ P+L LG E + + + + V GG +A+ Q +K
Sbjct: 1004 LMNIYSEPMDFISDRTV-FQLK-PLLDLGSEYYEQLILGIVVSAGG-LAEG---TQKTAK 1057
Query: 302 ALIAFYQKYVXE 337
L+ +Q+ + E
Sbjct: 1058 QLLLDHQREICE 1069
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 474 PSXKPSGGIVAASCCHCDIIGWCTIKNIK 560
P+ + G I+ CC IG C +KNI+
Sbjct: 430 PAPEDPGTILLDICCGTGTIGQCLLKNIQ 458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,528,803
Number of Sequences: 27780
Number of extensions: 263255
Number of successful extensions: 646
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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