Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P21
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 162 6e-39
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 136 6e-31
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 134 2e-30
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 120 3e-26
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 111 1e-23
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 105 1e-21
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 97 2e-19
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 89 8e-17
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 87 5e-16
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 87 5e-16
UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 83 7e-15
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 81 3e-14
UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17; Magn... 81 3e-14
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 69 1e-10
UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1; ... 42 4e-09
UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1; F... 59 1e-07
UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2; Caenorh... 58 2e-07
UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 53 7e-06
UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2; Cryptos... 46 6e-04
UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150, w... 46 0.001
UniRef50_A1INJ8 Cluster: Cytochrome c oxidase subunit 2; n=9; Ne... 44 0.003
UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2; Dictyos... 44 0.004
UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4; Ob... 43 0.006
UniRef50_Q8LX77 Cluster: Cytochrome oxidase II; n=2; Chaoborus|R... 40 0.039
UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9; Trypano... 40 0.039
UniRef50_A4S554 Cluster: Ribosomal protein L28, component of cyt... 39 0.090
UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78; H... 39 0.090
UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;... 39 0.12
UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subuni... 38 0.16
UniRef50_Q8LX83 Cluster: Cytochrome oxidase II; n=2; Chaoborus|R... 38 0.27
UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.63
UniRef50_Q6FUT9 Cluster: Candida glabrata strain CBS138 chromoso... 36 0.84
UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214; ... 36 1.1
UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=... 35 1.9
UniRef50_UPI00006CFBC8 Cluster: hypothetical protein TTHERM_0048... 34 3.4
UniRef50_Q8GCM9 Cluster: ORF228; n=2; Mycoplasma|Rep: ORF228 - M... 33 4.5
UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing pr... 33 4.5
UniRef50_Q4WCS1 Cluster: MFS toxin efflux pump, putative; n=1; A... 33 4.5
UniRef50_UPI0000D9B080 Cluster: PREDICTED: hypothetical protein;... 33 5.9
UniRef50_Q6Q9N1 Cluster: Cytochrome oxidase subunit II; n=1; Zab... 33 7.8
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 162 bits (394), Expect = 6e-39
Identities = 74/124 (59%), Positives = 95/124 (76%)
Frame = -1
Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
FT V KK K ++PAKN +R FKAG RRSL K+K LL + YR DL + L R SA+LR
Sbjct: 64 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123
Query: 138 SQRP 127
SQ+P
Sbjct: 124 SQKP 127
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 136 bits (328), Expect = 6e-31
Identities = 63/127 (49%), Positives = 86/127 (67%)
Frame = -1
Query: 507 VKMSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPD 328
+ SS LNW+I+R++NAFL+K+ +I+KPFS EP N+TNL SFRY+GL+H K + + +
Sbjct: 1 IMASSHLNWLIVRDHNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTI-TITPAE 59
Query: 327 RKGFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSA 148
+KG VY + K KPAK ++ K G RR+L K+ ++K N YR DL L R SA
Sbjct: 60 KKGVNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRASA 119
Query: 147 ILRSQRP 127
ILRSQRP
Sbjct: 120 ILRSQRP 126
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 134 bits (324), Expect = 2e-30
Identities = 67/124 (54%), Positives = 81/124 (65%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MS+ L WMI RNNNA+L+KK +IKKPFS EP N+ N+ SFRYNGL+ K V V D K
Sbjct: 1 MSADLYWMITRNNNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGK 60
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
GF V K+AK KP K+ I AG RRSLYK++R L YR DL + L + SAIL
Sbjct: 61 GFVVTTKRAKQQNKPGKSNISVTMSAGPRRSLYKLRRYLDGGKYRKDLTQVALRKASAIL 120
Query: 141 RSQR 130
SQ+
Sbjct: 121 ESQK 124
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 120 bits (289), Expect = 3e-26
Identities = 57/126 (45%), Positives = 81/126 (64%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
G VV K+ RKPA + +R AR +L ++ +++ N YR DL + R SAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 141 RSQRPI 124
RSQ+P+
Sbjct: 119 RSQKPV 124
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 111 bits (268), Expect = 1e-23
Identities = 56/125 (44%), Positives = 76/125 (60%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MSS L W IIRNN+ FLV+ K +KEPNNVT L++F+YNGL++KK VGV P K
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGK 58
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
G + +K K KP K + + +RR+L ++ + N+YR DL + R AIL
Sbjct: 59 GVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDLKDPAMRRACAIL 118
Query: 141 RSQRP 127
RSQ+P
Sbjct: 119 RSQKP 123
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 105 bits (251), Expect = 1e-21
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKP---FSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 331
MS+ L W +I+N+++FL+++ + F+ EPNNV N +SF++NGL++KK VGV
Sbjct: 1 MSAELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA 60
Query: 330 DRKGFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXS 151
D KG K++K KPAK +R RR+ +K+ L+ YR DL + + R S
Sbjct: 61 DNKGVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDLAELAVRRAS 120
Query: 150 AILRSQRP 127
AIL SQRP
Sbjct: 121 AILSSQRP 128
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
+S + WM++RN ++FLVKK NIKK FS +P N +++ R+ G I K+A+ V + K
Sbjct: 2 VSRTYRWMVVRNCSSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSGK 61
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLK-XNHYRTDLCKXTLXRXSAI 145
G T VY K KPAK L R G RR++ ++ +K +YR DL + R SAI
Sbjct: 62 GVTFVYLAHKGATKPAKRLKRVQLVKGPRRTMVSIRNWIKGMGYYRRDLRRVCQRRASAI 121
Query: 144 LRSQRPI 124
L+SQR I
Sbjct: 122 LKSQRAI 128
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 89.0 bits (211), Expect = 8e-17
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 325
+SS L W + RN NAFLVK+ + FS++P N+ N HSF+Y G + KA+G V+ +
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIG-VQPTEN 66
Query: 324 KGFTVVYKKAKXTRKPAKNLIRRPF--KAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXS 151
G V+ KK+ ++P KN +R F KA R+ V N YR DL + + R S
Sbjct: 67 GGVVVLTKKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYRADLREDAVARVS 126
Query: 150 AILRSQRP 127
AI RSQ+P
Sbjct: 127 AIRRSQKP 134
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/108 (41%), Positives = 63/108 (58%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MSS L W +I+NN+ FL+K+ + FS++P N+ N + FRY G +HKKA+G+ E K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGK 58
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDL 178
G V K KPAK + R F G RR+L K++ L YR +L
Sbjct: 59 GVVVTTKNVAKDHKPAKAVTRTKFVRGRRRTLQKIRNLTCKQKYRREL 106
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 86.6 bits (205), Expect = 5e-16
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKK-XNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 325
+SS L W I RN NAFLVK+ FS++P N+ N SF+Y G + KAVG V+ +
Sbjct: 8 VSSDLVWQITRNQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVG-VQATEN 66
Query: 324 KGFTVVYKKAKXTRKPAKNLIRRPF-KAGARRSLYK-VKRLLKXNHYRTDLCKXTLXRXS 151
G V+ KK ++PAKNL+ + A R +YK V N YR DL + + R S
Sbjct: 67 GGVVVITKKPGNPQQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYRADLREDAVARVS 126
Query: 150 AILRSQRP 127
AI RSQ+P
Sbjct: 127 AIRRSQKP 134
>UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Frame = -1
Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
S L W+++RNN++F+VK+ I + FS+EP N+ LHS++Y+GL++ KAVG+ KG
Sbjct: 3 SQDLQWLLVRNNSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSGKG 62
Query: 318 FTVVYKKAKXTRKPAKNLIRRPF--KAGARRSLYKVKRLLKXNHYRTDLCK 172
+ K AK + K + K G RR+ V ++ YR DL +
Sbjct: 63 VVITTKNAKQSSSAIKKTVNVATLKKGGGRRTAGAVSNVVAKKGYRADLTR 113
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 82.6 bits (195), Expect = 7e-15
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = -1
Query: 507 VKMSSSLNWMIIRNNNAFLVKKXNIKK-PFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 331
+ +S+ L W +IR+NN FLVK+ F++EP NV+ ++ R++GL + KAVGV N
Sbjct: 1 MSVSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANS 60
Query: 330 DRKGFTVVYKKAKXTRKPAKNLIRRPFKAGA-RRSLYK-VKRLLKXNHYRTDLCKXTLXR 157
R + K +KPAK L R+ A A R YK + + YR DL K ++ R
Sbjct: 61 PRGVVLITKTNPKNAQKPAK-LFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVAR 119
Query: 156 XSAILRSQRP 127
SAIL SQRP
Sbjct: 120 ASAILSSQRP 129
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 80.6 bits (190), Expect = 3e-14
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -1
Query: 477 IIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKK 298
+IRNN+AFL ++ I+K FS+EP N+ ++S YNGL + KAVGV D K V KK
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNKSVVVSVKK 61
Query: 297 AKXTRKPAKNLIRRPFKAGARRSLYK-VKRLLKXNHYRTDLCKXTLXRXSAILRSQR 130
PA+++I+ K G R + K V+ L+K + R K R S +LRS R
Sbjct: 62 TGKKNLPAQSVIKTTIKRGGARGIVKSVQGLVKGRNAR--FAKLAARRASQLLRSVR 116
>UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17;
Magnoliophyta|Rep: 60S ribosomal protein L28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 80.6 bits (190), Expect = 3e-14
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = -1
Query: 489 LNWMIIRNNNAFLVK---KXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
L W I++NNN FLVK + N K FSKE NN+TN+HS++++GL +KK V + +
Sbjct: 8 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA 67
Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
+ K K KP ++ + K R V + N+YR DL K L R SAI +
Sbjct: 68 VVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISK 127
Query: 138 SQR 130
R
Sbjct: 128 GLR 130
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/118 (33%), Positives = 65/118 (55%)
Frame = -1
Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
S +L W++ +N ++FLVK+ F++E N+ N + +Y+GL KAV + + D+K
Sbjct: 3 SDTLTWLLTKNTSSFLVKRNG--NEFAREKFNLLNRNCRKYSGLASTKAVDISIS-DKK- 58
Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAI 145
T+ K K T+KPAK P + GAR ++ + N+YR DL K L + S +
Sbjct: 59 VTLTTKIEKATKKPAKAQNAVPLRKGARGGANTIRANISRNYYRRDLKKAALAKWSRL 116
>UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 41.9 bits (94), Expect(2) = 4e-09
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = -1
Query: 369 LIHKKAVGVVENPDRKGFTVVYKKAKXTRKPAKNLIRRPFKAGA-RRSLYK-VKRLLKXN 196
L +A+GV + + G + KK +++PAK+L + GA R +YK V N
Sbjct: 88 LTSNQAIGV-QATENGGVVTITKKPGTSQQPAKSLAVVTYGPGASNRKIYKGVADRTAKN 146
Query: 195 HYRTDLCKXTLXRXSAILRSQR 130
YR DL + + R SAI RSQ+
Sbjct: 147 GYRADLRQEAVSRVSAIRRSQK 168
Score = 41.5 bits (93), Expect(2) = 4e-09
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKK-XNIKKPFSKEPNNVTNLHSFR 379
+SS L W + RN NA+LVK+ + FS++P NV N HSF+
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFK 49
>UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: 60s ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 156
Score = 58.8 bits (136), Expect = 1e-07
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MSS L W+++RN N+F VK + FS+E N+ N + +Y+GL + K V + +P
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSI--HPSAA 57
Query: 321 GFTVVYKKAKXTRKP-----AKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXR 157
G + K K KP A++ + G RR+ YR DL + R
Sbjct: 58 G-GITITKIKADAKPNQVASARSHVTLKRSTGPRRANKIAAAETAGKGYRADLRAVAVAR 116
Query: 156 XSAILRSQR 130
SA+LR++R
Sbjct: 117 TSALLRAER 125
>UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L28 -
Caenorhabditis elegans
Length = 126
Score = 57.6 bits (133), Expect = 2e-07
Identities = 44/123 (35%), Positives = 64/123 (52%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MS +L W +IRNN+AFL + I K FS E N+ ++S +Y+GL +K A+ V + K
Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAK 58
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
G V K K +PAK + ++ + V+RL K N K R +AI+
Sbjct: 59 GVVVSTKNEKG--RPAKAVTTSTL---SKTPVASVRRLAK-NAGFNKFNKLAQRRAAAIV 112
Query: 141 RSQ 133
RSQ
Sbjct: 113 RSQ 115
>UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 183
Score = 52.8 bits (121), Expect = 7e-06
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
+S+ W ++ NA+LVK+ I S++P + NL + +GL H KAVGV
Sbjct: 48 VSNDFIWECTKSTNAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGVHYCKPSG 107
Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKX-NHYRTDLCKXTLXRXSAI 145
V+ K K KPAK+ FK + S K + K Y+ + + R SAI
Sbjct: 108 KICVITKVVKNANKPAKSRHIVEFKP-TKSSRAIAKAVSKTVQGYKDEQIYDAIVRASAI 166
Query: 144 LRS 136
R+
Sbjct: 167 KRA 169
>UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L28 -
Cryptosporidium parvum Iowa II
Length = 127
Score = 46.4 bits (105), Expect = 6e-04
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
S+ L W ++ N +F+ K F+ EP N+ NL++ +Y+GL ++++ + P+ G
Sbjct: 3 STELLWQCVKKNTSFIKKNNGFT--FTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSNG 60
Query: 318 FTVVYKKAKXTRK-PAKNLIRRPFK 247
V K AK T+K + IR P K
Sbjct: 61 KLV--KNAKITKKNTGSSTIRCPKK 83
>UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_150,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVV 340
MS + W +++ NNAFLVK+ + S +P N T + ++ G I K AVGVV
Sbjct: 1 MSQQVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVV 52
>UniRef50_A1INJ8 Cluster: Cytochrome c oxidase subunit 2; n=9;
Neoptera|Rep: Cytochrome c oxidase subunit 2 -
Neodexiopsis sp. 13-28.x.2001
Length = 96
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
MAT SNLNLQN ASP ++Q+IFFHD
Sbjct: 1 MATWSNLNLQNSASPFMEQLIFFHD 25
>UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L28
- Dictyostelium discoideum (Slime mold)
Length = 132
Score = 43.6 bits (98), Expect = 0.004
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = -1
Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
MS L W II+ NNAFL K + S EP N+ N +S +Y+GL + + V
Sbjct: 1 MSQDLVWSIIKKNNAFL--KSSHGLTLSAEPGNLRNKNSLKYSGLARRTTIDVAA---VN 55
Query: 321 GFTVVYKK-AKXTRKPAKNLIRRPFK-AGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSA 148
G VV K K PA++ F R++ VK L Y +L L R
Sbjct: 56 GKVVVSSKIVKKAAFPAQSKKTTTFSTVNTRKTARFVKTL--ATQYAPELRAAALGRLHR 113
Query: 147 ILRSQR 130
+ + R
Sbjct: 114 VQSALR 119
>UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4;
Obtectomera|Rep: Cytochrome c oxidase subunit 2 - Danaus
plexippus plexippus
Length = 221
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
MAT SN N QN ASPL++QIIFFHD
Sbjct: 1 MATWSNFNFQNSASPLMEQIIFFHD 25
>UniRef50_Q8LX77 Cluster: Cytochrome oxidase II; n=2; Chaoborus|Rep:
Cytochrome oxidase II - Chaoborus flavicans
Length = 96
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 561 QKGMAT*SNLNLQNGASPLIKQIIFFHD 644
+K MAT SNL LQ+ ASPL++Q+ FFHD
Sbjct: 37 EKKMATWSNLGLQDSASPLMEQLNFFHD 64
>UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L28 -
Trypanosoma cruzi
Length = 146
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = -1
Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
S+ L W+++R N+ FL K+ I+ S +P N + R+ G ++ KA V DR
Sbjct: 4 STDLQWLLVRQNSKFLQKRNGIR--LSSDPFNNNANWTKRHAGFLNTKAAVVKTKGDR-- 59
Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSL 226
V K K KP + AG S+
Sbjct: 60 ILVTTKDGKAGNKPKSMYKKAVMDAGVEASV 90
>UniRef50_A4S554 Cluster: Ribosomal protein L28, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L28, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 121
Score = 39.1 bits (87), Expect = 0.090
Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 1/127 (0%)
Frame = -1
Query: 507 VKMSSSLNWMIIRNNNAFL-VKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 331
V S W + + +NAF FS EP NVT SFR +GL + K + + E+
Sbjct: 5 VPASDDFLWQVTKKHNAFTRASTSGHGARFSAEPGNVTAEVSFRASGLANAKTIDIREHD 64
Query: 330 DRKGFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXS 151
KG KPA + + +VK K R DL K L R S
Sbjct: 65 GGKG------------KPAATCDGKKLCGSFKSQAGEVKIAAKA---RPDLEKAALARIS 109
Query: 150 AILRSQR 130
AI ++ R
Sbjct: 110 AINKAGR 116
>UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78;
Hexapoda|Rep: Cytochrome c oxidase subunit 2 - Cheilosia
urbana
Length = 227
Score = 39.1 bits (87), Expect = 0.090
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
M+T +NLNLQ+ ASPL++Q+ FFHD
Sbjct: 1 MSTWANLNLQDSASPLMEQLTFFHD 25
>UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;
Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila
melanogaster (Fruit fly)
Length = 228
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
M+T +NL LQ+ ASPL++Q+IFFHD
Sbjct: 1 MSTWANLGLQDSASPLMEQLIFFHD 25
>UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subunit;
n=2; Bacillus|Rep: Type III restriction enzyme, res
subunit - Bacillus coagulans 36D1
Length = 1068
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -1
Query: 456 FLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKXTRKP 277
F++ NIK+ + + V +H R GLI + + + E RKG +++ K T +
Sbjct: 47 FVLAAENIKEAYGT--SQVDRIHMLRREGLIEPELMDIFETLRRKGNQAMHEALKFTTEE 104
Query: 276 AKNLIRRPFK 247
AK L+R F+
Sbjct: 105 AKALLRLAFR 114
>UniRef50_Q8LX83 Cluster: Cytochrome oxidase II; n=2; Chaoborus|Rep:
Cytochrome oxidase II - Chaoborus albatus
Length = 90
Score = 37.5 bits (83), Expect = 0.27
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
MAT SN+ LQ+ ASPL++Q+ FFHD
Sbjct: 34 MATWSNMGLQDSASPLMEQLNFFHD 58
>UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 146
Score = 36.3 bits (80), Expect = 0.63
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = -1
Query: 489 LNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTV 310
L W +I+ NNA++ K + + F+KE N+ H+ Y+GL+ + + +P +
Sbjct: 27 LVWELIKKNNAYIFKSGH--ETFTKERYNLMARHTPMYSGLMQNSVMNLELSPSGSKIVL 84
Query: 309 VYKKAKXTRKP-----AKNLIRRP 253
+ R+P KNL + P
Sbjct: 85 TSMDLQNARQPRNKTQTKNLDKNP 108
>UniRef50_Q6FUT9 Cluster: Candida glabrata strain CBS138 chromosome
F complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome F complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 310
Score = 35.9 bits (79), Expect = 0.84
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = -1
Query: 507 VKMSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPD 328
+ +S L W II + K + + F ++P NVT L + + L + K V E D
Sbjct: 1 MNVSDDLIWDIINHGFCATKIKTKVGQTFDRDPYNVTGLFTRQSCPLANSKYATVREYGD 60
Query: 327 RKGFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKV-KRLLKXNHYRTDLCKXTLXRXS 151
+ + K + PAK R ++L ++ + L+ N + CK + S
Sbjct: 61 KGRLYLCIKTPERAHTPAKMWQRIRLSNNYSKALKQIDEHLMYWNKFFLHRCKQRYVKLS 120
Query: 150 AILRSQR 130
I +R
Sbjct: 121 QIKLVER 127
>UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214;
Mandibulata|Rep: Cytochrome c oxidase subunit 2 -
Hypoderma lineatum (Early cattle grub) (Common cattle
grub)
Length = 226
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
M+T SN +LQ+ +SPL++Q+ FFHD
Sbjct: 1 MSTWSNFSLQDSSSPLMEQLTFFHD 25
>UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=2;
Theileria|Rep: 60S ribosomal protein l28, putative -
Theileria annulata
Length = 150
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/96 (23%), Positives = 47/96 (48%)
Frame = -1
Query: 489 LNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTV 310
L W ++RNN+AFL K FS E +N+ + HS R+ ++ + + V ++ + V
Sbjct: 20 LLWELVRNNHAFLKKSRT--TTFSLESHNLLSKHSPRFT-VLTQFCITFVGYTNKTSYDV 76
Query: 309 VYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLK 202
V ++ +R + ++ S+ +K+ L+
Sbjct: 77 VLNSTGSLITLKRSNVRNSRRPSSKTSVKSLKKSLE 112
>UniRef50_UPI00006CFBC8 Cluster: hypothetical protein
TTHERM_00487140; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00487140 - Tetrahymena
thermophila SB210
Length = 294
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 495 SSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVT 397
S L W I++NNNAFLVK + F+ +P +VT
Sbjct: 2 SQLVWEIVKNNNAFLVKNNGV--AFTTDPFSVT 32
>UniRef50_Q8GCM9 Cluster: ORF228; n=2; Mycoplasma|Rep: ORF228 -
Mycoplasma fermentans
Length = 228
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = -1
Query: 483 WMIIRNNNAFLVKKXNIKKPFSKEP--NNVTNLHSFRYNGLIHKK--AVGVVENPDRKGF 316
WM + N + L+K+ N+K P ++ N+ +F++NG ++++ V V+ N +
Sbjct: 10 WMSLVNKDNLLIKEENLKPKKIVFPLIGSIINVQAFKFNGELYRQWNGVKVLRNTPQHYV 69
Query: 315 TVVYKKAKXTRKPAKNLIRRPFKAG--ARRSLYKVKRLLK 202
+Y K K K + R + + S+Y LLK
Sbjct: 70 LFMY-KTKVAETDKKGWVYREYVLWFMPKNSMYNALILLK 108
>UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclin,
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 353
Score = 33.5 bits (73), Expect = 4.5
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -1
Query: 504 KMSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNN-VTN-LHSFRYNGLIHKKAVGVVENP 331
K S LNW + N + K NIK K+ NN +TN L F +N I+K+ + ++E
Sbjct: 36 KKKSYLNWQGCKKINNKQINKQNIKATQIKKKNNQLTNSLLGFSFNQSINKQIIQLLEIN 95
Query: 330 DRKGFTVVYKKAKXTRKPAKNL 265
K K + RK K +
Sbjct: 96 KIKEKKKETKNKQIKRKEIKQI 117
>UniRef50_Q4WCS1 Cluster: MFS toxin efflux pump, putative; n=1;
Aspergillus fumigatus|Rep: MFS toxin efflux pump,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 636
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 371 PLYLKEWRLVTLFGSLLNGFLILXFFTRNALLLRMIIQFSDDDIFTV*TYFYTKHNVLTM 550
P +LK W+L + S+ +I N +L I + +D +Y +LT
Sbjct: 80 PEHLKSWKLGFVMASI--SLVIFCMSLDNTILATAIPKITDQFNSLDDVGWYGSSYLLTT 137
Query: 551 CAXTKRHGNMIKFKSTKWSF 610
C+ +G + F STKW +
Sbjct: 138 CSLVLPYGKLYTFYSTKWVY 157
>UniRef50_UPI0000D9B080 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 73
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 222 CTVTSWHQP*MDGGLSF*RAFWXPLLSCTLL*IPSCQGSPRHQRLSCES 368
C+++ W P DG +F R+FW P+LS + I GS +H R S S
Sbjct: 15 CSLSVWSSP-FDGVFNFGRSFWKPILS--TIPITLKLGSLKHLRKSTNS 60
>UniRef50_Q6Q9N1 Cluster: Cytochrome oxidase subunit II; n=1; Zabrus
melancholicus|Rep: Cytochrome oxidase subunit II -
Zabrus melancholicus
Length = 58
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 570 MAT*SNLNLQNGASPLIKQIIFFHD 644
MAT NLN + ASPL++Q++FF D
Sbjct: 1 MATWXNLNXXDSASPLMEQLMFFXD 25
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,704,471
Number of Sequences: 1657284
Number of extensions: 10093579
Number of successful extensions: 22947
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 22260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22920
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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