Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P21
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0431 + 29308635-29308782,29308882-29309048,29309747-29309869     83   2e-16
02_05_1254 - 35275050-35275178,35275701-35275867,35275969-35276116     81   1e-15
05_06_0252 - 26695467-26695595,26697233-26697399,26697503-26697650     80   2e-15
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320...    29   4.2  
03_05_0394 + 23758392-23758625,23759097-23759273,23759349-237594...    29   4.2  
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223...    27   9.7  

>01_06_0431 + 29308635-29308782,29308882-29309048,29309747-29309869
          Length = 145

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
 Frame = -1

Query: 492 SLNWMIIRNNNAFLVKKX---NIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
           SL W +++ NN+FLVK+    N K  FSKEPNN+ N+HS++++GL +KK V V     ++
Sbjct: 7   SLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQPASGKE 66

Query: 321 GFTVV-YKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAI 145
              V+   K +   KPA    +   +   R+    VK  +  N+YR DL K  L R SA+
Sbjct: 67  TAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSAV 126

Query: 144 LRS 136
            RS
Sbjct: 127 YRS 129


>02_05_1254 - 35275050-35275178,35275701-35275867,35275969-35276116
          Length = 147

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
 Frame = -1

Query: 489 LNWMIIRNNNAFLVKKX---NIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           L W I++ NN FLVK+    N K  F+KEPNN+ N+HS++++GL +KK V +  +  +  
Sbjct: 8   LFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSGGKDA 67

Query: 318 FTVV-YKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
             V+   K K    PAK   +   +   R+    VK  +  N+YR DL K  L R S++ 
Sbjct: 68  AVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 127

Query: 141 RS 136
           RS
Sbjct: 128 RS 129


>05_06_0252 - 26695467-26695595,26697233-26697399,26697503-26697650
          Length = 147

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
 Frame = -1

Query: 489 LNWMIIRNNNAFLVKKX---NIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           L W I++ NN FLVK+    N K  F+KEPNN+ N+HS++++GL +KK V +  +  +  
Sbjct: 8   LIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSGVKDA 67

Query: 318 FTVV-YKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
             V+   K K    PAK   +   +   R+    VK  +  N+YR DL K  L R S++ 
Sbjct: 68  AVVLSTTKTKKQNAPAKLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPALARLSSVY 127

Query: 141 RS 136
           RS
Sbjct: 128 RS 129


>04_03_0582 +
           17528335-17529790,17529913-17531651,17531814-17532035,
           17532062-17533525
          Length = 1626

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 510 TVKMSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFR 379
           T++ SS+L WM+I + N  L +  +    FSK P   T + +FR
Sbjct: 582 TIRQSSALPWMVIGDFNETLWQFEH----FSKNPRCETQMQNFR 621


>03_05_0394 +
           23758392-23758625,23759097-23759273,23759349-23759453,
           23759640-23759681,23759763-23759960,23760037-23760165,
           23760248-23760377,23761119-23761179,23761241-23761322,
           23761402-23761653
          Length = 469

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 391 EVSHIVRLLAERLFDIALLHKECIVVADDHPVQ*RRH 501
           +VSHI+ +  E+  D+AL + EC +  + H  Q   H
Sbjct: 361 KVSHIIVVACEKCLDLALKYVECCLKHNQHFEQNEPH 397


>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
            2233053-2233513,2233593-2233717,2233801-2234098,
            2235004-2236234,2236562-2237233,2237329-2238539
          Length = 1884

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -1

Query: 468  NNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
            N  A +  K   KKP  ++P         +Y GL+ KK+     N +  G
Sbjct: 1474 NAGAQVQPKTKSKKPKPEKPRKSKKTEEIKYFGLVWKKSTNDKNNNENSG 1523


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,368
Number of Sequences: 37544
Number of extensions: 281453
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)