Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P21
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p pro...   161   6e-40
AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p pro...   161   6e-40
AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD...   161   6e-40
AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB...   161   6e-40
AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA...   161   6e-40
AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC...   144   1e-34

>AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p
           protein.
          Length = 236

 Score =  161 bits (392), Expect = 6e-40
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 96  SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 155

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL +  L R SA+LR
Sbjct: 156 FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 215

Query: 138 SQRP 127
           SQ+P
Sbjct: 216 SQKP 219


>AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p
           protein.
          Length = 144

 Score =  161 bits (392), Expect = 6e-40
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL +  L R SA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 138 SQRP 127
           SQ+P
Sbjct: 124 SQKP 127


>AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD,
           isoform D protein.
          Length = 144

 Score =  161 bits (392), Expect = 6e-40
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL +  L R SA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 138 SQRP 127
           SQ+P
Sbjct: 124 SQKP 127


>AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB,
           isoform B protein.
          Length = 144

 Score =  161 bits (392), Expect = 6e-40
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL +  L R SA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 138 SQRP 127
           SQ+P
Sbjct: 124 SQKP 127


>AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA,
           isoform A protein.
          Length = 144

 Score =  161 bits (392), Expect = 6e-40
 Identities = 74/124 (59%), Positives = 95/124 (76%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAILR 139
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL +  L R SA+LR
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASAVLR 123

Query: 138 SQRP 127
           SQ+P
Sbjct: 124 SQKP 127


>AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC,
           isoform C protein.
          Length = 165

 Score =  144 bits (348), Expect = 1e-34
 Identities = 65/107 (60%), Positives = 83/107 (77%)
 Frame = -1

Query: 498 SSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 319
           SS LNW+IIRNNNAFL+KK ++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 318 FTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDL 178
           FT V KK K  ++PAKN +R  FKAG RRSL K+K LL  + YR DL
Sbjct: 64  FTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDL 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,071,147
Number of Sequences: 53049
Number of extensions: 477706
Number of successful extensions: 996
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)