Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P21
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-8|CAA99898.1|  126|Caenorhabditis elegans Hypothetical pr...    57   9e-09
AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical...    28   4.9  
U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine rece...    28   6.5  
Z81497-8|CAC70080.1|  707|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z75953-7|CAB00101.2|  707|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U00181-1|AAA18259.1|  707|Caenorhabditis elegans protein kinase ...    27   8.6  

>Z75547-8|CAA99898.1|  126|Caenorhabditis elegans Hypothetical
           protein R11D1.8 protein.
          Length = 126

 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 44/123 (35%), Positives = 64/123 (52%)
 Frame = -1

Query: 501 MSSSLNWMIIRNNNAFLVKKXNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 322
           MS +L W +IRNN+AFL  +  I K FS E  N+  ++S +Y+GL +K A+ V  +   K
Sbjct: 1   MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAK 58

Query: 321 GFTVVYKKAKXTRKPAKNLIRRPFKAGARRSLYKVKRLLKXNHYRTDLCKXTLXRXSAIL 142
           G  V  K  K   +PAK +        ++  +  V+RL K N       K    R +AI+
Sbjct: 59  GVVVSTKNEKG--RPAKAVTTSTL---SKTPVASVRRLAK-NAGFNKFNKLAQRRAAAIV 112

Query: 141 RSQ 133
           RSQ
Sbjct: 113 RSQ 115


>AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical
           protein Y43F8B.15 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 572 GNMIKFKSTKWSFTFNKTNYFF 637
           GNMIKF    W+  F+ TN F+
Sbjct: 217 GNMIKFSINLWNAVFSFTNSFY 238


>U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine
           receptor, class r protein10 protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 404 LFGSLLNGFLILXFFTRNALLLRMIIQFS 490
           L  SL+NG  I  FF  N LL  +I+ F+
Sbjct: 255 LLWSLINGIYITSFFNSNPLLYSIILGFN 283


>Z81497-8|CAC70080.1|  707|Caenorhabditis elegans Hypothetical
           protein F57F5.5 protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 420 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 304
           SK P    ++H F +  ++ K + G V   +RKG   VY
Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404


>Z75953-7|CAB00101.2|  707|Caenorhabditis elegans Hypothetical
           protein F57F5.5 protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 420 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 304
           SK P    ++H F +  ++ K + G V   +RKG   VY
Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404


>U00181-1|AAA18259.1|  707|Caenorhabditis elegans protein kinase C
           protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 420 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 304
           SK P    ++H F +  ++ K + G V   +RKG   VY
Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,326,270
Number of Sequences: 27780
Number of extensions: 244022
Number of successful extensions: 532
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)