Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P19
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 200 1e-50
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 177 1e-43
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 146 3e-34
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 140 2e-32
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 134 9e-31
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 131 7e-30
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 127 1e-28
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 111 8e-24
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 107 2e-22
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 99 6e-20
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 82 5e-15
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 80 2e-14
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 69 4e-11
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 68 9e-11
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 58 1e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 54 2e-06
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 53 4e-06
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 51 1e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 48 8e-05
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 46 6e-04
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 44 0.001
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 43 0.003
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 39 0.065
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.086
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 38 0.086
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 38 0.11
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 36 0.46
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 0.46
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 36 0.60
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.80
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 34 1.8
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 3.2
UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1; Nanoar... 32 7.4
UniRef50_Q1F0E9 Cluster: Chemotaxis sensory transducer precursor... 31 9.8
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 9.8
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 31 9.8
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 200 bits (488), Expect = 1e-50
Identities = 97/120 (80%), Positives = 102/120 (85%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
RTKTV EKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHS
Sbjct: 5 RTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHS 64
Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQPAT 427
QVRGISIKLQE ERERRDNYVP VSALE DIIEV DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 65 QVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 177 bits (430), Expect = 1e-43
Identities = 83/118 (70%), Positives = 97/118 (82%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
VRGISIKLQE ERERRDNYVPEVSAL+ +IIEV PDTK+MLK+LDF +++ LQ+TQP
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 146 bits (353), Expect = 3e-34
Identities = 69/105 (65%), Positives = 81/105 (77%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXE 286
EKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE E
Sbjct: 73 EKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEE 132
Query: 287 RERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
RERRDNYVPE SAL+ +IIEV PDTK ML + F ++ Q TQP
Sbjct: 133 RERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 140 bits (338), Expect = 2e-32
Identities = 68/120 (56%), Positives = 86/120 (71%)
Frame = +2
Query: 71 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 250
TK EKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+R
Sbjct: 7 TKITKKATQVIIEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGP 65
Query: 251 VRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQPATQ 430
VRGISIKLQE ERE RDNYVPE+S L+ + +EV PDTK+ML++LDF +++ LQ+T+P +
Sbjct: 66 VRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 134 bits (324), Expect = 9e-31
Identities = 64/117 (54%), Positives = 85/117 (72%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
RTKTV EKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++
Sbjct: 5 RTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRG 64
Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQ 418
VRGIS+KLQE ERERR ++VPE SALE + I V +T +ML L ++ G++ Q
Sbjct: 65 PVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 131 bits (317), Expect = 7e-30
Identities = 61/105 (58%), Positives = 81/105 (77%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXE 286
++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE E
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKE 131
Query: 287 RERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
RER+DNYVPE+SA + + IEV PDTK+M K+L+F +++ LQ+TQP
Sbjct: 132 RERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 127 bits (307), Expect = 1e-28
Identities = 59/104 (56%), Positives = 82/104 (78%)
Frame = +2
Query: 110 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXER 289
+Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQ E
Sbjct: 56 EYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQ--EE 113
Query: 290 ERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
ERR +Y+PEVSAL+ +I EV P TK+MLK+LD +++ LQ+TQP
Sbjct: 114 ERRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 111 bits (267), Expect = 8e-24
Identities = 55/105 (52%), Positives = 76/105 (72%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXE 286
EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + E
Sbjct: 67 EKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGE 120
Query: 287 RERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
R +++ YVPEVSAL+ +IIEV PDT++MLK+LDF +++ LQ+TQP
Sbjct: 121 R-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 107 bits (256), Expect = 2e-22
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = +2
Query: 44 QLQPWVVSRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
Q+ W + EKYY +LT DF NK+I E+ +P+K LRNKIAGFATH
Sbjct: 37 QIHSWEELEIRQQRKAAKVLIEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATH 96
Query: 224 LMRRLRHSQVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLK 376
L++R++ V+GIS+K+QE ERERR +YVPE S+++ D + D K ML+
Sbjct: 97 LLKRIQTGSVKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 98.7 bits (235), Expect = 6e-20
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
RTKTV EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL
Sbjct: 5 RTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARG 64
Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDI---IEVXPDTKDMLKMLD 385
VRGIS+KLQE ERERR ++ P S ++ I + V T ML+ L+
Sbjct: 65 PVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 82.2 bits (194), Expect = 5e-15
Identities = 44/110 (40%), Positives = 63/110 (57%)
Frame = +2
Query: 71 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 250
TK + EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+ +R S
Sbjct: 6 TKILKKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSD 65
Query: 251 VRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNIN 400
+ +S R R NYVPE S L+ +I EV TK+MLK+ F +++
Sbjct: 66 SQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 80.2 bits (189), Expect = 2e-14
Identities = 37/103 (35%), Positives = 60/103 (58%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
R K V EKY+ RL FD N + +++A++ +K L+N+IAG+ T L +++
Sbjct: 5 RNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKG 64
Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLK 376
+ IK E ERER++N +P+ S L+ D +EV T +M+K
Sbjct: 65 TYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 69.3 bits (162), Expect = 4e-11
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
RTKT+ KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 5 RTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKG 64
Query: 248 QVRGI--SIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNIN 400
+ + I +IK E + S E + V +TK M+K L F N N
Sbjct: 65 KKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 68.1 bits (159), Expect = 9e-11
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2
Query: 212 FATHLMRRLRHSQVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFN 391
F HLMRR++ VRGIS+KLQE ERERR ++VPE S ++ +I+V DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 18 KKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +2
Query: 314 EVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
+VSAL+ ++IEV PDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 52.8 bits (121), Expect = 4e-06
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
R+K V E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR +
Sbjct: 5 RSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLI 64
Query: 248 QVRGISIKLQEXERERRDNYVPEV 319
+ R +S++ QE + Y+ +
Sbjct: 65 EQR-LSMR-QEITMTDEEEYIRRI 86
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 259
EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 18 EKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 48.4 bits (110), Expect = 8e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
RT V E + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 5 RTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 45.6 bits (103), Expect = 6e-04
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 74 KTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQ 250
KT EK YT L+ D K +C+EI I P+K L KIAGF LM+++ R+ +
Sbjct: 24 KTGKKAAWVITEKNYTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYK 82
Query: 251 VRGISIKLQEXERERRDNYVPEVSALEHDIIEVXP 355
++ +S L ER +D V L+ +++ P
Sbjct: 83 LQELSSSL-AAERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXE 286
E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E
Sbjct: 18 EMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAE 77
Query: 287 RER 295
R
Sbjct: 78 EFR 80
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
R + V EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 5 RIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 38.7 bits (86), Expect = 0.065
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
R + E Y T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 5 RETNIKRTAFSLIENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.3 bits (85), Expect = 0.086
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIKL 274
E + ++ DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K
Sbjct: 13 ETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASKS 72
Query: 275 QEXERERRDNYVPEVSALEHDIIEVXPDTK 364
E E + V E E P+T+
Sbjct: 73 LEQEAQVEPEPVEATENTEAPAAEETPETE 102
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 38.3 bits (85), Expect = 0.086
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 235
+KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 18 KKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 37.9 bits (84), Expect = 0.11
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 107 EKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 17 ERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 35.9 bits (79), Expect = 0.46
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -3
Query: 222 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAAFLT 79
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFFT 64
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.9 bits (79), Expect = 0.46
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 110 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
+Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 19 QYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.5 bits (78), Expect = 0.60
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 110 KYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 18 KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.80
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFAT 220
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 33.9 bits (74), Expect = 1.8
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +2
Query: 71 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 232
TK + +K+ + + +D NK++ +E + +K ++N+IAG+ T ++
Sbjct: 6 TKDIKRVARELYDKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVK 59
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 33.1 bits (72), Expect = 3.2
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +2
Query: 152 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPEVSA- 325
RIC I ++ +P+ + G L +R++ + + +K + E +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 326 --LEHDIIEVXPDTKDMLKMLDFNNINGLQ 409
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17e -
Nanoarchaeum equitans
Length = 72
Score = 31.9 bits (69), Expect = 7.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 68 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 232
+ K V ++Y T DF+ NK++ + + +K RN+IAG+ L++
Sbjct: 5 KIKVVKRTALELFKRYPDIWTKDFEKNKKLVQALLKKVSKKFRNQIAGYLVRLVK 59
>UniRef50_Q1F0E9 Cluster: Chemotaxis sensory transducer precursor;
n=1; Clostridium oremlandii OhILAs|Rep: Chemotaxis
sensory transducer precursor - Clostridium oremlandii
OhILAs
Length = 533
Score = 31.5 bits (68), Expect = 9.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 254 RGISIKLQEXER--ERRDNYVPEVSALEHDIIEVXPDTKDMLKMLD 385
RG S+ +E + E +N+ E+S + D+IE + D++K LD
Sbjct: 382 RGFSVVAEEVRKLAEESNNFTQEISTVVVDLIEKTENAVDIIKQLD 427
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 9.8
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 295 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 167
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.5 bits (68), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 113 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 235
Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 34 YEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,011,417
Number of Sequences: 1657284
Number of extensions: 7323026
Number of successful extensions: 18001
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 17659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17994
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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