Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P19
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   190   2e-50
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   1.8  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.2  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   7.2  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  190 bits (464), Expect = 2e-50
 Identities = 93/118 (78%), Positives = 101/118 (85%)
 Frame = +2

Query: 68  RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 247
           RTKT+        EKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHS
Sbjct: 5   RTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHS 64

Query: 248 QVRGISIKLQEXERERRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
           QVRGISIKLQE ERERRDNYVP+VSALE DIIEV P+TK+MLK LDFNNI  +QLT P
Sbjct: 65  QVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP 121


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 234 VSDTRKCEESLSNFRXRSVRGVTTMSQKCLLSNMTS 341
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 293 RRDNYVPEVSALEHDIIEVXPDTKDMLKMLDFNNI 397
           R D Y   ++ L H    V  D   ++  LDF NI
Sbjct: 208 RSDGYQLGITVLSHVNSSVFMDIPAIINYLDFVNI 242


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 251 VRGISI--KLQEXERERRDNYVPEV 319
           +R +SI  KLQ   ++RRD YV  V
Sbjct: 168 IRSLSICAKLQRIPKDRRDLYVQGV 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,983
Number of Sequences: 2352
Number of extensions: 7993
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)