Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P16
(480 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 184 9e-46
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 167 1e-40
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 166 3e-40
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 165 6e-40
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 157 1e-37
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 151 1e-35
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 105 5e-22
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 104 9e-22
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 102 5e-21
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 100 2e-20
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 99 4e-20
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 91 9e-18
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 91 2e-17
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 90 2e-17
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 87 2e-16
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 69 4e-11
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 4e-09
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 7e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.005
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.038
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 39 0.067
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.47
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 35 0.82
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 35 1.1
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 34 1.4
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 34 1.4
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 34 1.9
UniRef50_A0G972 Cluster: Putative uncharacterized protein precur... 33 4.4
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 32 7.7
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 184 bits (448), Expect = 9e-46
Identities = 84/98 (85%), Positives = 91/98 (92%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LLPSRQFG++VLTTS GIMDHE ARRKH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 61 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 147
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 167 bits (405), Expect = 1e-40
Identities = 76/98 (77%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 334
VI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT
Sbjct: 33 VIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTAR 92
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LLPSRQFG++VLTTS GIMDHE ARRK++GGK+LGFF+
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +1
Query: 61 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 147
MVR++VL+D LKS++NAEKRGKRQV+IRP
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRP 29
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 166 bits (403), Expect = 3e-40
Identities = 77/98 (78%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
VIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W N
Sbjct: 156 VIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNN 215
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LLP RQFG++VLTT GI+DHE ARRKH GGKILGFFF
Sbjct: 216 LLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +1
Query: 61 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 147
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRP 152
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 165 bits (400), Expect = 6e-40
Identities = 74/96 (77%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Frame = +2
Query: 161 IVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNL 337
IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W NL
Sbjct: 132 IVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNL 191
Query: 338 LPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFF 445
LP+RQFG++VLTT GIMD E R+KH GG+ILGFF
Sbjct: 192 LPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
Score = 39.9 bits (89), Expect = 0.029
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 55 LAMVRMNVLSDALKSIHNAEKRGKRQVLIR 144
+ MV MNVL DALKS ++AEK GKRQ IR
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIR 126
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 157 bits (381), Expect = 1e-37
Identities = 74/98 (75%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W N
Sbjct: 33 VIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQNN 91
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LLPS QFG+++LTTS GI D E ARRKH GGKILGFFF
Sbjct: 92 LLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 61 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 147
MVR NVL+DALK I+NA+KRGKRQVL+RP
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRP 29
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 151 bits (365), Expect = 1e-35
Identities = 69/92 (75%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
VIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W N
Sbjct: 199 VIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWRNN 258
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGK 430
L PS QFG++VLTTS GIMDHE AR+KH G +
Sbjct: 259 LFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 82 SDALKSIHNAEKRGKRQVLIR 144
SDALKSI+NAEKRGKRQVLIR
Sbjct: 174 SDALKSINNAEKRGKRQVLIR 194
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 105 bits (252), Expect = 5e-22
Identities = 46/98 (46%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 334
V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R DV +IE++T
Sbjct: 32 VMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTER 91
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP+RQ+GY+V+TT GI+DHE A ++++GG++LGFF+
Sbjct: 92 TLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
Score = 32.3 bits (70), Expect = 5.8
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1
Query: 76 VLSDALKSIHNAEKRGKRQVLIRP 147
+L+DAL++I NAE+RGK V ++P
Sbjct: 5 ILNDALRTIVNAERRGKASVELKP 28
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 104 bits (250), Expect = 9e-22
Identities = 46/94 (48%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 170 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 346
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 347 RQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
RQFG+++ TS GI+DH+ +++GGKILG+F+
Sbjct: 95 RQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 102 bits (244), Expect = 5e-21
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF V +++ E+W
Sbjct: 33 LIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKR 92
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP+ +FG L+++TS G+M H+ A K +GG+++ + +
Sbjct: 93 FLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 100 bits (239), Expect = 2e-20
Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN- 334
+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R +
Sbjct: 33 LIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDY 92
Query: 335 ---LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LPS++ G ++++T G+M H R+ +GG LG+ +
Sbjct: 93 IRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 99.1 bits (236), Expect = 4e-20
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +2
Query: 173 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSR 349
L VM GYIG+FE +DD +AG V L GR+NKCG I PR+ V ERW LP++
Sbjct: 38 LKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAK 97
Query: 350 QFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
FG L+LTTS G+M AR K +GG++L + +
Sbjct: 98 NFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 91.5 bits (217), Expect = 9e-18
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
+I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+W
Sbjct: 50 IIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKR 109
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP+R +G L++TTS G+M H AR + +GG+++ + +
Sbjct: 110 YLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 90.6 bits (215), Expect = 2e-17
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
+I + L VM + YI FE++++ R GK V L+ +N CGVI PR V ++IER+ +
Sbjct: 32 MIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESR 91
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP++ FG ++LTT+ GIM H AR+ +GGK+L + +
Sbjct: 92 YLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 90.2 bits (214), Expect = 2e-17
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF + + E +
Sbjct: 32 LIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKR 91
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP+R FG L+++T+ G+M + AR++ LGG +L + +
Sbjct: 92 YLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 87.0 bits (206), Expect = 2e-16
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +2
Query: 164 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLL 340
V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V + W L
Sbjct: 35 VEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYL 94
Query: 341 PSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
PS G LV+TT+ G+M H A + +GG ++G+ +
Sbjct: 95 PSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 69.3 bits (162), Expect = 4e-11
Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 334
+I+K + +M + GYI + +VD R I + L+ N+ I PRF V +++E++
Sbjct: 32 LIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKR 91
Query: 335 LLPSRQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
LP+ FG L+L+TS G++ + A+ + +GG ++ + +
Sbjct: 92 YLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 4e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 194 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 286
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 35.5 bits (78), Expect = 0.62
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 55 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRP 147
++ V + + +S++NAEKRGKRQVL+RP
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRP 61
Score = 22.6 bits (46), Expect(2) = 4e-09
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 158 VIVKFLTVMMKH 193
V++KFL VM KH
Sbjct: 65 VVIKFLQVMQKH 76
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2
Query: 170 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 325
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2
Query: 218 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 319
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.038
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 200 IGEFEIVDDHRAGKIVVNLTGRLNK 274
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 38.7 bits (86), Expect = 0.067
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +2
Query: 164 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS----PRFDVPINDIERWT 331
+ L +++K GY+ F+++++ K +V + + + S + P I R
Sbjct: 42 IAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLRIYRPF 101
Query: 332 NLLPS--RQFGYLVLTTSGGIMDHEXARRKHLGGKILGF 442
LP G +++TS G+M + AR K +GG+IL +
Sbjct: 102 EKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAY 140
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.47
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 227 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 379
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 35.1 bits (77), Expect = 0.82
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +2
Query: 179 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGVISPRFDVPINDIERWTNL--LPS- 346
++ + GYI ++ V+D G I V L +NK I V + ++T +P
Sbjct: 37 ILFEKGYILNYKFVEDGPQGTIKVALKYDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRV 96
Query: 347 -RQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
G +++TS G+M ++ A +GG++L + +
Sbjct: 97 INGLGIAIISTSKGVMTNKEAAELKIGGEVLCYVY 131
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 34.7 bits (76), Expect = 1.1
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +2
Query: 179 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGV-ISPRFDVPINDIERWTNLLP--S 346
++++ GYI F +DD + G + V L ++ + + R P ++ LP
Sbjct: 40 ILLEKGYIKNFVNIDDEKQGLLRVYLKYDEYDQPAIRMLERVSRPGRREYADSDNLPEVK 99
Query: 347 RQFGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
G ++L+TS G+M + ARR +GG++L F
Sbjct: 100 NGLGIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 34.3 bits (75), Expect = 1.4
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 293 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
R VP + + R LP + G +L+T G+M AR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 34.3 bits (75), Expect = 1.4
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Frame = +2
Query: 158 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VIS--PRFDVPINDIER 325
++V L V + G+I ++++D + GK +N+ + ++ G VIS R + +
Sbjct: 31 IVVSILEVFLAKGFIESYKVID--KDGKQSINVVLKYDEKGRSVISEIKRISKSGRRVYK 88
Query: 326 WTNLLPSRQFGY--LVLTTSGGIMDHEXARRKHLGGKIL 436
+ L + GY +V++TS G++ +E A + ++GG+ L
Sbjct: 89 GRDELKRFKNGYGTIVVSTSKGVIGNEEAYKANVGGEAL 127
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 33.9 bits (74), Expect = 1.9
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 164 VKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIERWTNL 337
+ L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 31 INVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKKLEKF 90
Query: 338 LPSRQFGYLVLTTSGGIMDHEXARRKHLGGKIL 436
L + G+L+L+TS GI+ E + +GG+ L
Sbjct: 91 LTKKDSGFLILSTSKGILTDEESNMFKIGGEAL 123
>UniRef50_A0G972 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia phymatum STM815|Rep:
Putative uncharacterized protein precursor -
Burkholderia phymatum STM815
Length = 287
Score = 32.7 bits (71), Expect = 4.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 115 KRGKRQVLIRPXFQSHR*VFNSDDEARLHRRV 210
+RG+R V++ P F R V + D RLHRR+
Sbjct: 83 RRGRRAVILHPRFPRLRTVGGTPDRLRLHRRI 114
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 356 GYLVLTTSGGIMDHEXARRKHLGGKILGFFF 448
G ++L+TS GIM AR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,153,774
Number of Sequences: 1657284
Number of extensions: 7388748
Number of successful extensions: 14457
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14439
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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