Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P14
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004994A3 Cluster: hypothetical protein 179.t00006;...    38   0.21 
UniRef50_Q5WLK7 Cluster: Putative uncharacterized protein; n=2; ...    35   2.0  
UniRef50_Q5BQW1 Cluster: SJCHGC09788 protein; n=1; Schistosoma j...    33   6.0  
UniRef50_UPI00006CAEEF Cluster: hypothetical protein TTHERM_0084...    33   7.9  
UniRef50_O51296 Cluster: Conserved hypothetical integral membran...    33   7.9  
UniRef50_Q674P3 Cluster: NADH dehydrogenase subunit 6; n=1; Tetr...    33   7.9  

>UniRef50_UPI00004994A3 Cluster: hypothetical protein 179.t00006;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 179.t00006 - Entamoeba histolytica HM-1:IMSS
          Length = 548

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 25/53 (47%), Positives = 30/53 (56%)
 Frame = +3

Query: 270 LDFGILDGLHT*VSSFQSDNLYSLIFLPFSAFNFLPNFRLNLPK*KLPSSYNQ 428
           L F I  GLH  +     D LYSL  L  S F+F+PNF LN  K  +PSS+ Q
Sbjct: 367 LSFLISGGLHVLLDYGCVDQLYSL--LKCSLFDFIPNFHLN--KNDIPSSFQQ 415


>UniRef50_Q5WLK7 Cluster: Putative uncharacterized protein; n=2;
           Bacillus|Rep: Putative uncharacterized protein -
           Bacillus clausii (strain KSM-K16)
          Length = 245

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 306 VSSFQSDNLYSLIFLPFSAFNFLPNFRLN 392
           +  F+SD LY LI +PF +F+ LP+  +N
Sbjct: 91  IEEFKSDKLYDLILIPFGSFSLLPDSIVN 119


>UniRef50_Q5BQW1 Cluster: SJCHGC09788 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09788 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 94

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = +1

Query: 262 REYWTSEYWTDCIPE*VRSNQTTFIPSYFCRLAHSIFYLIFASICQNK 405
           R+ W   Y     P+  +S    F   YF RL H IF  I AS C NK
Sbjct: 33  RDPWIRNYAWRYSPKIYKSRPEWFRGIYFKRLPHGIFLGIVASFCINK 80


>UniRef50_UPI00006CAEEF Cluster: hypothetical protein
           TTHERM_00840010; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00840010 - Tetrahymena
           thermophila SB210
          Length = 1114

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
 Frame = +2

Query: 95  FYTSPVYPRAVRNMVLYFCQLKTHRNKTCTTNCRRWLAI--*KRTDVLLFTTLKLQGVVN 268
           F +S  Y + +RN ++  CQ    +N  C++     LA    K  D  ++ +     +VN
Sbjct: 61  FQSSSYYDQQIRNQIVNSCQQAIFKNLNCSSQVHTCLAFQAQKNMDSFVYISNLFLNLVN 120

Query: 269 IGLRNIGRIAYLSEFVPIRQPLFPHIFAV*RIQFFT*FSPQFAKIKTTLILQS 427
              +++    Y+  +   +  +FP +    R++  T  +  +  I+   I+ +
Sbjct: 121 TESQDVKINVYIQNYQSYKN-VFPWLMIAERMRLVTIETDTYGNIQQNSIVNT 172


>UniRef50_O51296 Cluster: Conserved hypothetical integral membrane
           protein; n=3; Borrelia burgdorferi group|Rep: Conserved
           hypothetical integral membrane protein - Borrelia
           burgdorferi (Lyme disease spirochete)
          Length = 268

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +3

Query: 333 YSLIFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVYFAYYNTL 503
           + + +L  S FNF+P F LNL       S N   F+F   + I L I+VY   Y+ +
Sbjct: 93  FFVXYLMKSNFNFIPGFTLNL-------SGNFEIFVFIAVFFIFLFITVYVISYSRI 142


>UniRef50_Q674P3 Cluster: NADH dehydrogenase subunit 6; n=1;
           Tetraleurodes acaciae|Rep: NADH dehydrogenase subunit 6
           - Tetraleurodes acaciae (acacia whitefly)
          Length = 142

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 32/85 (37%), Positives = 44/85 (51%)
 Frame = +3

Query: 228 FYCSLR*SCKES*ILDFGILDGLHT*VSSFQSDNLYSLIFLPFSAFNFLPNFRLNLPK*K 407
           ++CS+  S K   + D   L  L T V  F S + + LI+L    F +   F LNL K  
Sbjct: 48  YFCSVIFSEKSILLSDLSFLLVLFTLVFLFSSTSFFDLIYLINVKFLYF-EF-LNLLK-Y 104

Query: 408 LPSSYNQNSFLFFNSYLIILIISVY 482
           L   Y+  S LFF SYL++ +I VY
Sbjct: 105 LFYPYSIYS-LFFISYLLVCLIVVY 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,943,236
Number of Sequences: 1657284
Number of extensions: 10554309
Number of successful extensions: 24684
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24673
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)