Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P14
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   3.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 432 SFLFFNSYLIILIISVYFAYY 494
           +F+FFN +L+ L+   YF  +
Sbjct: 185 AFIFFNMHLLFLLCLDYFTLH 205



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 441 FFNSYLIILIISVYFAYY 494
           ++  Y  I+++ VY+ YY
Sbjct: 101 YYFYYAFIILLCVYYFYY 118


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 97  LYITGLPQSSSKHGPLL 147
           L + G P   S HGPL+
Sbjct: 144 LQVPGAPMMMSSHGPLM 160


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 438 LFFNSYLIILIISVYFAYYNTL*ANILRIXYS 533
           L F     I + +VY+ YY+   A+I+   Y+
Sbjct: 143 LVFVFCYFIYLFTVYYIYYSVHEASIINFGYT 174


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +1

Query: 184 NKLSALVGHLKTNGRFTVHYVEAARSREYWTSEYWTDCIP 303
           N+L  L G    + RFT H ++      + T+ + T   P
Sbjct: 254 NRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTP 293


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 84  PLFYFIHHRSTPEQFETWSFT 146
           P  Y IHH +TP Q     +T
Sbjct: 24  PPHYNIHHGATPPQSPNQQYT 44


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 379 IFASICQNKNYPHLTIKIH 435
           I+ ++   KN+PH+ +  H
Sbjct: 80  IYQTLLSGKNHPHIQLPKH 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,467
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)