Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P14
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0225 + 26951993-26952165,26953169-26953567,26953644-269537...    31   1.1  
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109...    29   4.3  

>02_05_0225 +
           26951993-26952165,26953169-26953567,26953644-26953797,
           26954069-26954240,26954494-26954567,26954667-26954763,
           26954888-26955000,26955168-26955283,26955960-26956017,
           26956512-26956664,26957377-26957460,26957579-26957734,
           26958401-26958469,26959212-26959300,26959398-26959560,
           26959740-26959874,26959950-26960055,26960143-26960237,
           26960508-26960753,26961567-26961635,26961772-26961837,
           26961838-26961983,26962348-26962449,26962752-26962899,
           26964183-26964239,26964315-26964445,26964535-26964623,
           26964694-26965007,26965084-26965176,26966504-26966578,
           26966834-26966895,26967254-26967356,26967518-26967676,
           26967790-26967930,26967981-26968084,26968146-26968260,
           26969017-26969169,26969256-26969417
          Length = 1646

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 92  KEWTVVFGKFIKKVKQ-DKASKCRGRRCC 9
           KEW  +F  FI   K+ DKAS+C   +CC
Sbjct: 63  KEWKDLFWDFIDHWKELDKASECLTAKCC 91


>05_01_0162 -
           1095020-1095202,1096114-1096188,1096939-1097039,
           1097467-1097577,1097704-1097807,1098260-1098493,
           1098583-1099304
          Length = 509

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 104 MYKIKEWTVVFGKFIKKVKQDKAS-KCRGRRCCT 6
           ++K   W    G+F+ K   DKA+ KC GR   T
Sbjct: 302 LHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVT 335


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,531,930
Number of Sequences: 37544
Number of extensions: 262839
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)