Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P14
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical ...    31   0.94 
AC006769-11|AAF60586.1|  340|Caenorhabditis elegans Seven tm rec...    29   3.8  
AC006645-4|AAF39845.2|  340|Caenorhabditis elegans Seven tm rece...    29   3.8  
Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF068709-9|AAC19248.1|  349|Caenorhabditis elegans Seven tm rece...    28   5.0  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z78413-8|CAB01665.2|  541|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical...    27   8.8  
AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm rece...    27   8.8  
AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm rece...    27   8.8  
AC024882-2|AAF60935.2|  344|Caenorhabditis elegans Seven tm rece...    27   8.8  

>AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.4 protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 375 PNFRLNLPK*KLPSSYNQNSFLFFNSYLIIL 467
           PN+ LN    +L  SYN  S LFFN +  IL
Sbjct: 289 PNYPLNFSVRRLQKSYNSLSLLFFNFFKNIL 319


>AC006769-11|AAF60586.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 154 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 342 IFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVY 482
           +FLP       P F+LN+P   LP S   + F   +S  II ++  Y
Sbjct: 264 LFLPTVFIGASPLFKLNIPWASLPLSILFSMFAVVDSIPIIFLVDEY 310


>AC006645-4|AAF39845.2|  340|Caenorhabditis elegans Seven tm
           receptor protein 267 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 342 IFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVY 482
           +FLP       P F+LN+P   LP S   + F   +S  II ++  Y
Sbjct: 264 LFLPTVFIGASPLFKLNIPWASLPLSILFSMFAVVDSIPIIFLVDEY 310


>Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical
           protein B0391.4 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 339 LIFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFF---NSYLIILIISVY 482
           ++F+P +   FLP F L++    LPS     SF  +   +S++++ ++S Y
Sbjct: 264 ILFIPITIIIFLPLFHLDV---SLPSGVMLCSFTLYPAADSFIVMFVVSEY 311


>AF068709-9|AAC19248.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 13 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 339 LIFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFF---NSYLIILIISVY 482
           ++F+P +   FLP F L++    LPS     SF  +   +S++++ ++S Y
Sbjct: 264 ILFIPITIIIFLPLFNLDV---SLPSGVMLCSFALYPPTDSFIVMFVVSEY 311


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
           protein F31C3.3 protein.
          Length = 2029

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 131 FELLWGRPVMYKIKEWTVVFGKFIKK 54
           +  LW R V + + EWTV F  +  K
Sbjct: 842 YSTLWARAVEFDVDEWTVTFKDYPMK 867


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 259 SREYWTSEYWTDCIPE*VRSNQTTFIPSYFCRLAHSIFYLIFASICQNKNYP 414
           SR  W +  WT+C+P      +   +  Y  + AH++   +  + C+N   P
Sbjct: 235 SRCRWMAADWTECVPHCGEGTRKREV--YCVQTAHNVTVHVPDTFCENGTRP 284


>Z78413-8|CAB01665.2|  541|Caenorhabditis elegans Hypothetical
           protein T01C3.8 protein.
          Length = 541

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -2

Query: 209 WPTNADSL---LYRFYSGEF*ADKSKGPCFELLWGRPVMYKI 93
           W T  D+L   L RF++GE       GP  E  +G+P+++ I
Sbjct: 83  WRTLQDALYCSLGRFHNGEHLFCIHSGPNHEFYYGQPILHSI 124


>AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7a protein.
          Length = 833

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 119 RAVRNMVLYFCQLKTHRNKTCTTNCR 196
           R+ RN VL +CQ   H N  C+  CR
Sbjct: 805 RSHRNHVLPWCQPGCHVNDYCSNECR 830


>AF067948-6|AAC17701.1|  337|Caenorhabditis elegans Seven tm
           receptor protein 30 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +3

Query: 327 NLYSLIFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVYFAYY 494
           +L  + FL    F F   FR+N+    +  SY      FF S LI  I S  F +Y
Sbjct: 205 SLMEIQFLIVGIFGFRMYFRMNILLQNVSKSYEMIQRQFFKS-LIYQITSPTFTFY 259


>AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 155 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 342 IFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVY 482
           +FLP       P F+LN+P   LP S   + F   +S  II ++  Y
Sbjct: 264 LFLPTLLIAAGPLFKLNIPWASLPLSILFSMFSVMDSIPIIFLVDEY 310


>AC024882-2|AAF60935.2|  344|Caenorhabditis elegans Seven tm
           receptor protein 156 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 342 IFLPFSAFNFLPNFRLNLPK*KLPSSYNQNSFLFFNSYLIILIISVY 482
           +FLP       P F+LN+P   LP S   + F   +S  II ++  Y
Sbjct: 264 LFLPTLLIAAGPLFKLNIPWASLPLSILFSIFSVMDSIRIIFLVDEY 310


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,293,661
Number of Sequences: 27780
Number of extensions: 262838
Number of successful extensions: 702
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)