Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P13
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    83   1e-18
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    38   6e-05
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    37   1e-04
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   2.5  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   2.5  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   2.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.7  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 83.0 bits (196), Expect = 1e-18
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = +3

Query: 126 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVXXXXXXXXXXXXXPGEEFXEDR 305
           NFD+FMK +GVG++TRK  ++V+P VEL ++   Y L               GEEF E+ 
Sbjct: 16  NFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEET 75

Query: 306 ADGAKVKSVCTFEGNTLKQVQK 371
            DG KVKSVCT +GN L QVQK
Sbjct: 76  VDGRKVKSVCTLDGNKLIQVQK 97


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 37.5 bits (83), Expect = 6e-05
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
 Frame = +3

Query: 126 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVXXXXXXXXXXXXXPGEEFXE-- 299
           NF+EF K +G   +         P+ EL K+GDE+                    F E  
Sbjct: 15  NFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETL 73

Query: 300 DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVRXF 410
                 K ++V + EGNT K   +  D L+VT +  F
Sbjct: 74  PSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEF 110


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 36.7 bits (81), Expect = 1e-04
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
 Frame = +3

Query: 126 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVXXXXXXXXXXXXXPGEEFXE-- 299
           NF+EF K +G   +         P+ EL K+GDE+                    F E  
Sbjct: 13  NFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETL 71

Query: 300 DRADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 395
                 K ++V + EGNT K   +  D L+VT
Sbjct: 72  PSLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 333 CTFEGNTLKQVQKAPDGL 386
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 333 CTFEGNTLKQVQKAPDGL 386
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 333 CTFEGNTLKQVQKAPDGL 386
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 141 MKTIGVGLITRKAANAVTPTVELRKDGDEYN 233
           MKTI  G    +    V    E  K G EY+
Sbjct: 513 MKTIKKGSFVTQYVGEVITNEEAEKRGKEYD 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,610
Number of Sequences: 438
Number of extensions: 1680
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)