Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P09
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.26 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 151 KTVRWVKTNKYGGVETAILR 210
           KTV W+K  K  G+E A+LR
Sbjct: 337 KTVSWLKDGKPLGLEEAVLR 356


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 15 VFITRHTPRLWF 50
          +F+T H P  WF
Sbjct: 20 IFVTSHRPAWWF 31


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 294 SEGLEGRLVAAQKV*TPDNGPANGPRCGP*NGRLDSAIF 178
           S+  +GR +   K+  P   PA+ P C   NG   SA F
Sbjct: 873 SDSAQGRAIL--KI--PSYKPASTPGCSSKNGEPTSAAF 907


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 202 WPSRLRHIYS 173
           WPS LR IYS
Sbjct: 213 WPSDLRTIYS 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,383
Number of Sequences: 438
Number of extensions: 3089
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)