Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P07
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 106 1e-23
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 92 3e-19
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 91 4e-19
07_01_1001 - 8460467-8460799 73 1e-13
07_03_0321 + 16757414-16757743 67 7e-12
01_06_0098 - 26416768-26416998 32 0.31
04_04_0524 - 25916869-25916876,25917352-25917506,25917712-259178... 30 1.3
08_02_1093 - 24271826-24273427 29 1.7
12_01_0090 + 717524-719080 29 2.9
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.9
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 28 3.8
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 5.1
11_06_0264 - 21785450-21786928 27 6.7
12_02_1217 + 27082452-27083593,27085041-27085158 27 8.8
11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764 27 8.8
10_06_0005 + 9459181-9459409,9459672-9459714,9460274-9460360,946... 27 8.8
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 27 8.8
07_03_1321 - 25794146-25794904 27 8.8
05_02_0121 - 6834843-6835127 27 8.8
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 106 bits (254), Expect = 1e-23
Identities = 56/115 (48%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Frame = +1
Query: 115 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 294
M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 295 KLSSMPVGGG---XXXXXXXXXXXXXXXEXXKXDNKXXXKXXSESDDDMGFGLFD 450
K +S+P GGG E K + K K ESDDDMGF LFD
Sbjct: 61 KFASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEK--EESDDDMGFSLFD 113
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 112 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 291
+M++++AYLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 292 EKLSSMPVGGGXXXXXXXXXXXXXXXEXXKXDNK-XXXKXXSESDDDMGFGLFD 450
EK +S+P GGG K + ESDDDMGF LFD
Sbjct: 253 EKFASVPCGGGGVAVAAAAPAAGGGAAPQSEAKKEEKVEEKEESDDDMGFSLFD 306
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 91.5 bits (217), Expect = 4e-19
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +1
Query: 115 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 294
M++++AYL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GRE
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 295 KLSSMPVGGGXXXXXXXXXXXXXXXEXXKXDNKXXXK--XXSESDDDMGFGLFD 450
K +S+P GGG + K K ESDDDMGF LFD
Sbjct: 61 KFASVPSGGGGVAVAAAAPAAGGAGGAPAAEAKKEDKVEEKEESDDDMGFSLFD 114
>07_01_1001 - 8460467-8460799
Length = 110
Score = 72.9 bits (171), Expect = 1e-13
Identities = 40/112 (35%), Positives = 58/112 (51%)
Frame = +1
Query: 115 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 294
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60
Query: 295 KLSSMPVGGGXXXXXXXXXXXXXXXEXXKXDNKXXXKXXSESDDDMGFGLFD 450
L+ VG E K + K E +DD+ F LFD
Sbjct: 61 MLAFGGVGAAPAAAATAGGGAAAAGEKEKEEE----KVEEEEEDDIVFSLFD 108
>07_03_0321 + 16757414-16757743
Length = 109
Score = 67.3 bits (157), Expect = 7e-12
Identities = 38/112 (33%), Positives = 56/112 (50%)
Frame = +1
Query: 115 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 294
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60
Query: 295 KLSSMPVGGGXXXXXXXXXXXXXXXEXXKXDNKXXXKXXSESDDDMGFGLFD 450
L+ E K + K E +DD+ F LFD
Sbjct: 61 MLAFGAAPAAAAATAGGAAAAGEKEEEEKVEEK-----EKEGEDDIVFSLFD 107
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 166 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 264
P V KI+ +V IEAD+ + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>04_04_0524 -
25916869-25916876,25917352-25917506,25917712-25917841,
25918013-25918094,25918180-25918213,25918271-25918327,
25918686-25918791,25920755-25920881
Length = 232
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 WIVLSYLLTFVQRRTLFFR-HYTFRVN*DLKNALRG 128
W +L Y+L F QR L R +TF V +LK L+G
Sbjct: 51 WYILRYVLGFFQRYNLLPRDSFTFLVGCNLKTILQG 86
>08_02_1093 - 24271826-24273427
Length = 533
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 112 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 291
+ R AA +AV G+TT AAA + SS G + ++ + L +D +A R
Sbjct: 3 RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARDAVASMALSR 62
>12_01_0090 + 717524-719080
Length = 518
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 320 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIF 186
PP + S P ++ S+S SS + + ++S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 323 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPP 150
PPP I + A +S P+S+V + L+ SASA+ F+ + A +PP
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPP 1172
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 415 ESDDDMGFGLFD 450
ESDDDMGF LFD
Sbjct: 99 ESDDDMGFSLFD 110
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = -1
Query: 261 LAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLATQHSQ*IRGHVTHFLSPN*HETCN 82
L EL DY LK VS + G N++ WR + + R N + C+
Sbjct: 1035 LCEELLDYILKNHQVSQEPKGILHAFNIALCWRAASLLKHKINRRESLALSVRNLNYECD 1094
Query: 81 AERITFVVEQTSTSKKERSSKVS 13
+V E+ KK+ S + S
Sbjct: 1095 EVLAEYVYEKLRILKKKFSRRAS 1117
>11_06_0264 - 21785450-21786928
Length = 492
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 323 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTE 198
PPP + + S AIS + V FL S++A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 133 YLLAVLGGKTTPAAADVEKILSSVGIEADAEKL 231
Y+LA+ TPA +D E+ VG +AD + L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
Length = 515
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 96 HETCNAERITFVVEQTSTSKKERSS 22
HETCN + +V E T+KK R S
Sbjct: 354 HETCNNQLSEYVQETAMTNKKVRLS 378
>10_06_0005 +
9459181-9459409,9459672-9459714,9460274-9460360,
9460669-9460810
Length = 166
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 38 LLVDVCSTTNVILSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLPLTLRRSS 196
L+++ CS +++ L C + + Y CW R R+L LRRS+
Sbjct: 110 LILNECSCVHMLGQGLQTKCLIAGWDKASKQNFYG-CWHMRHRRLRFVLRRSN 161
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 69 LFFRHYTFRVN*DLKNALRGRVFTGCAGWQDHASCR*R*EDPQL 200
+ HY ++V K+ GRV T A WQD + R P L
Sbjct: 501 MLINHYKYQVWEVFKDKFSGRVATYVADWQDEENVGSRDRAPGL 544
>07_03_1321 - 25794146-25794904
Length = 252
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 281 AISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 138
A+ ++S P ++ T L A A + + R +T+AAA PPS+ S
Sbjct: 157 AMMRASSSPATNTTTSLVLDALAML-AKSRAIATAAAAAAAAPPSSGS 203
>05_02_0121 - 6834843-6835127
Length = 94
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 208 IEADAEKLKKVITELNGKDVEQLIAAGREK 297
+EADA + K V+ L GKD A+ E+
Sbjct: 17 VEADAAEFKSVVQSLTGKDSTAATASPEEE 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,749,723
Number of Sequences: 37544
Number of extensions: 172712
Number of successful extensions: 580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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