Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P04
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 256 5e-67
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 214 2e-54
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 180 3e-44
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 143 4e-33
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 135 1e-30
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 131 2e-29
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 128 1e-28
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 115 1e-24
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 111 1e-23
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 111 1e-23
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 110 3e-23
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 110 3e-23
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 9e-18
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 84 2e-15
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 79 7e-14
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 47 5e-04
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 44 0.002
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 40 0.069
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.28
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.28
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.37
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 37 0.49
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.49
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.86
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 35 2.0
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 4.6
UniRef50_Q5NWV3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 33 6.0
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 256 bits (626), Expect = 5e-67
Identities = 120/136 (88%), Positives = 128/136 (94%)
Frame = +3
Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 500
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 501 GRAGTVRRQAVDVSPL 548
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELIN 654
P RRVNQAIWLLCTGAREAAFRNIKTIAEC+A ELIN
Sbjct: 143 PLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELIN 179
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 214 bits (522), Expect = 2e-54
Identities = 100/130 (76%), Positives = 115/130 (88%), Gaps = 1/130 (0%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 338
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 339 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 518
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 519 RRQAVDVSPL 548
RRQAVD+SPL
Sbjct: 128 RRQAVDISPL 137
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = +1
Query: 475 DPVKIRLGSVVRVQFVVKPLMFHPXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELIN 654
D +I VVR Q V P RRVNQAI+LL TGAREAAFRNIK+IAEC+A ELIN
Sbjct: 117 DATRIGSAGVVRRQAVD----ISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELIN 172
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 180 bits (438), Expect = 3e-44
Identities = 94/147 (63%), Positives = 113/147 (76%)
Frame = +3
Query: 108 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 287
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 288 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 467
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 468 NSGPREDSTRIGRAGTVRRQAVDVSPL 548
GPREDSTRIG AGTVRRQAVDVSPL
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPL 143
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELIN 654
P RRVNQA+ L+ GAREAAFRN+K+I+EC+A E+IN
Sbjct: 142 PLRRVNQALALITIGAREAAFRNVKSISECLAEEIIN 178
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 143 bits (346), Expect = 4e-33
Identities = 62/128 (48%), Positives = 90/128 (70%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 341
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 342 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 521
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 522 RQAVDVSP 545
R+AVDVSP
Sbjct: 139 REAVDVSP 146
Score = 37.5 bits (83), Expect = 0.28
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELIN 654
P R+++QAI+ + G ++AAF+N K+I+ + E++N
Sbjct: 146 PYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILN 182
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 135 bits (326), Expect = 1e-30
Identities = 68/128 (53%), Positives = 88/128 (68%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 341
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 342 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 521
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 522 RQAVDVSP 545
+AVD SP
Sbjct: 129 HEAVDSSP 136
Score = 39.5 bits (88), Expect = 0.069
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELI 651
P RR++ A+ L+ GA++ AFRN K I EC+A E+I
Sbjct: 136 PQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEII 171
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 131 bits (316), Expect = 2e-29
Identities = 67/129 (51%), Positives = 92/129 (71%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 341
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 342 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 521
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 522 RQAVDVSPL 548
R +VDVSPL
Sbjct: 140 RTSVDVSPL 148
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +1
Query: 490 RLGSVVRVQFVVKPLMFHPXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELI 651
R GS+ R V PL +R++ AI L G R A+FRN T+AE +A ELI
Sbjct: 134 RAGSMRRTSVDVSPL-----KRISIAISNLSAGIRNASFRNRITLAEAIANELI 182
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 128 bits (309), Expect = 1e-28
Identities = 68/127 (53%), Positives = 83/127 (65%)
Frame = +3
Query: 165 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 344
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 345 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 524
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 525 QAVDVSP 545
+VDVSP
Sbjct: 156 VSVDVSP 162
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELI 651
P RR++ A+ + GAR +F N K I EC+A E+I
Sbjct: 162 PQRRLDLALRWITEGARACSFNNPKPIEECLADEII 197
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 115 bits (276), Expect = 1e-24
Identities = 62/156 (39%), Positives = 93/156 (59%)
Frame = +3
Query: 78 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 257
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 258 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 437
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 438 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSP 545
P+QVLV+A+ N+ PRE++ R+ G QAVD +P
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAP 149
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 111 bits (268), Expect = 1e-23
Identities = 60/128 (46%), Positives = 79/128 (61%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 341
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 342 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 521
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 522 RQAVDVSP 545
Q+VDVSP
Sbjct: 125 LQSVDVSP 132
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELI 651
P RR++ A + GA + A ++ K+IA+C+A EL+
Sbjct: 132 PSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELV 167
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 111 bits (268), Expect = 1e-23
Identities = 53/126 (42%), Positives = 84/126 (66%)
Frame = +3
Query: 168 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 347
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 348 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 527
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 528 AVDVSP 545
AVD +P
Sbjct: 123 AVDTAP 128
Score = 37.9 bits (84), Expect = 0.21
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +1
Query: 502 VVRVQF----VVKPLMFHPXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELI 651
VVR+++ V K + P RRV+ A+ + G AAF++ +++AEC+A ELI
Sbjct: 110 VVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELI 163
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 110 bits (264), Expect = 3e-23
Identities = 58/143 (40%), Positives = 88/143 (61%), Gaps = 2/143 (1%)
Frame = +3
Query: 126 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 299
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 300 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 479
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 480 REDSTRIGRAGTVRRQAVDVSPL 548
RE++ R+ G ++VD +PL
Sbjct: 122 REETVRLKYGGINVPKSVDTAPL 144
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 110 bits (264), Expect = 3e-23
Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 16/145 (11%)
Frame = +3
Query: 162 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 341
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 342 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 473
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 474 GPREDSTRIGRAGTVRRQAVDVSPL 548
PRED+T + G AVD+SPL
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPL 158
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 9e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 306 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 461
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +3
Query: 408 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 548
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 220
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1
Query: 544 PXRRVNQAIWLLCTGAREAAFRNIKTIAECVAXELIN 654
P RRVNQAIWLLCTGAREAAFRNIKTIAEC+A ELIN
Sbjct: 219 PLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELIN 255
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 79.4 bits (187), Expect = 7e-14
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +3
Query: 198 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 374
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 375 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSP 545
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSP 121
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 72 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 236
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -2
Query: 412 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 248
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/99 (30%), Positives = 50/99 (50%)
Frame = +3
Query: 279 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 458
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 459 AIINSGPREDSTRIGRAGTVRRQAVDVSPLXPSQPSNLA 575
+ GP +T+ G +++ V + PL Q + A
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI-PLNEKQRNRFA 197
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 44.4 bits (100), Expect = 0.002
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 291 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 470
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 471 SGP--REDSTRIGRAGTVRRQAVDVS 542
+ P + RIG G+ + V+VS
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVS 92
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 39.5 bits (88), Expect = 0.069
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +3
Query: 282 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 461
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 462 IINSGPREDSTRIGRAGTVRRQAV 533
+ P +T++ + G + + V
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTV 196
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.28
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 479
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 37.5 bits (83), Expect = 0.28
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 285 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 464
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 465 INSGPRED-STRIGRAGTVRRQAVDV 539
P TR + G+ R+ +++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEI 92
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 327 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 464
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 36.7 bits (81), Expect = 0.49
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +3
Query: 315 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 494
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAPLM-MV 193
Query: 495 RIGRAGTVRRQAVDVSPLXPSQPSNLAF 578
+ G + + V PL Q + +A+
Sbjct: 194 KTFNTGVAKAAVIPV-PLSQRQRNRIAW 220
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 315 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 491
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 492 TRIGRAGTVRR 524
RAG++++
Sbjct: 76 KPRRRAGSIQQ 86
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.65
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +3
Query: 216 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 395
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 396 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 512
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.65
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 315 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 479
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.9 bits (79), Expect = 0.86
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 57 EKYQLMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSLQD 227
E+ L+AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D +
Sbjct: 203 EEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQ 260
Query: 228 YISVKEKYAKYLPHSAG 278
Y S + K+ + P G
Sbjct: 261 YPSSEFKFKTFTPPKTG 277
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 34.7 bits (76), Expect = 2.0
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +3
Query: 285 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 464
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 465 INSGPREDSTRIGRAGTVRRQAVDVSP 545
P+ +AG R+ +++ P
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQP 92
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 460 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 546
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_Q5NWV3 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 245
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 647 NSXATHSAIVLIFLNAASRAPVHKSQIAWLTRRQG*NINGLTTNC 513
N+ HS VL+ LN A + P+ ++ WL ++G + L T C
Sbjct: 57 NAADAHSVHVLLHLNDAEKTPIGCVRVVWLNEQRGYSTLPLETVC 101
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 324 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 497
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 498 IG 503
IG
Sbjct: 535 IG 536
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 60 KYQLMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 239
K ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 240 KEKYAKYLPH 269
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,736,581
Number of Sequences: 1657284
Number of extensions: 12783371
Number of successful extensions: 33016
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 31378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32949
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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