Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P02
(615 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 255 5e-67
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 252 7e-66
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 133 6e-59
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 219 3e-56
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 188 9e-47
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 185 6e-46
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 180 2e-44
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 180 3e-44
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 145 2e-43
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 168 1e-40
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 151 1e-35
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 105 8e-22
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 98 2e-19
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 94 2e-18
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 91 3e-17
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 90 4e-17
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 89 6e-17
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 86 7e-16
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 85 2e-15
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 85 2e-15
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 85 2e-15
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 84 2e-15
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 79 8e-14
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 79 8e-14
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 79 8e-14
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 76 6e-13
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 76 8e-13
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 75 2e-12
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 74 2e-12
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 68 2e-10
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 64 3e-09
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 60 3e-08
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 60 4e-08
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 50 3e-05
UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium tu... 37 0.33
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 37 0.33
UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.58
UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_030005... 35 1.8
UniRef50_A7SI31 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.1
UniRef50_UPI00015BAF49 Cluster: histidinol dehydrogenase; n=1; I... 33 4.1
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 5.4
UniRef50_Q02CR2 Cluster: TonB-dependent receptor, plug precursor... 33 5.4
UniRef50_Q22BQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precurs... 33 7.1
UniRef50_UPI000058722D Cluster: PREDICTED: similar to Ehf protei... 32 9.4
UniRef50_A4Y015 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 32 9.4
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 255 bits (625), Expect = 5e-67
Identities = 117/159 (73%), Positives = 132/159 (83%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P LIFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++ K
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLG G
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 252 bits (616), Expect = 7e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 133 bits (321), Expect(2) = 6e-59
Identities = 67/106 (63%), Positives = 72/106 (67%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAK 389
KVRTD TYP GFMDV+SI KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 75 KVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Score = 117 bits (282), Expect(2) = 6e-59
Identities = 48/74 (64%), Positives = 62/74 (83%)
Frame = +3
Query: 387 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 566
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 567 LCMITGGRNLGACG 608
+CM+TGG NLG G
Sbjct: 212 MCMVTGGANLGRIG 225
Score = 89.0 bits (211), Expect = 8e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 32 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 2 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 219 bits (536), Expect = 3e-56
Identities = 105/179 (58%), Positives = 126/179 (70%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++ +RNRLKYALT EV+ I+ QR I+VDG
Sbjct: 15 PKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ + G K
Sbjct: 75 KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+ GN+ M+TGGRN G G
Sbjct: 135 GIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVG 193
Score = 87.0 bits (206), Expect = 3e-16
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL 44
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 188 bits (458), Expect = 9e-47
Identities = 84/159 (52%), Positives = 112/159 (70%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P P ++ LRNRL YAL G EV IVK R IK+DGK+RTD YP GFMDV+SI +
Sbjct: 35 PHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPR 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+Y+ K RF + +T E+AK+KLCK+++ G +PY+VTHDGRTIRYP P +
Sbjct: 95 TKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPEL 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ ND+I+L++ T KI+DF+KF+ GN M+ GG +G G
Sbjct: 155 QANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVG 193
Score = 79.0 bits (186), Expect = 8e-14
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
MARGP+ HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL
Sbjct: 1 MARGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPL 44
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 185 bits (451), Expect = 6e-46
Identities = 88/148 (59%), Positives = 109/148 (73%)
Frame = +3
Query: 165 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDV 344
IFLRNRLKYALTG+EV KI Q IKVDGK+RTD P MDV+SI K E F LIY +
Sbjct: 56 IFLRNRLKYALTGDEVKKICMQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGI 115
Query: 345 KGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA 524
RF +HRITPEE KYKLCK++++ K +P+LV HD T+R+PD LIKVND+IQ+D+
Sbjct: 116 NRRFALHRITPEEVKYKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLE 175
Query: 525 TTKIMDFIKFESGNLCMITGGRNLGACG 608
T KI +KF++GNLC++TGG N G G
Sbjct: 176 TGKI-TALKFDTGNLCLVTGGGNWGRIG 202
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 20 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLP 157
++ +A GPK+HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP
Sbjct: 9 ITAVAFGPKQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLP 54
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 180 bits (438), Expect = 2e-44
Identities = 81/159 (50%), Positives = 112/159 (70%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P P IFLR+RLKYALT E + IVK+RL+KVDGKVRT+ YP G MDV+ + K
Sbjct: 49 PHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRYPTGLMDVIELGK 108
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
+NELFR+IYD KGRF +H I +EA +KL +V + G K +P++VTHDGRTI Y DP +
Sbjct: 109 SNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSV 168
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+V+D+++ +I T ++ IKF+ G++ M+T G N+G G
Sbjct: 169 RVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVG 207
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +2
Query: 2 AFSI*YLSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
+FS L M R + HLKRL AP W+L K G +A PSTGPHKLRECLP+ F
Sbjct: 6 SFSWSVLFLMPRCQRFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIF 61
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 180 bits (437), Expect = 3e-44
Identities = 83/159 (52%), Positives = 112/159 (70%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P ++ P +I +RN+LKY+ E L I+K+ I VDGKVR D +PAG MDV+SI
Sbjct: 35 PHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNEIYVDGKVRADKNFPAGVMDVISIKT 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E +R++YD G F +HRIT +E+ +KLCKV RV+ G K +PY+VTHDGRTIR+P+ LI
Sbjct: 95 TKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
K NDSI LD+ K++DFIKF G+LC++ G N+G G
Sbjct: 155 KSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIG 193
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
M+RG KKH KRLNAPK W+L+KLGG++APR S+GPHK + +PL
Sbjct: 1 MSRGIKKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPL 44
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 145 bits (352), Expect(2) = 2e-43
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +3
Query: 339 DVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLD 518
D KGRF +HRITPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 519 IATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ T KI DF KF++GNLCM+TGG NLG G
Sbjct: 136 LETGKITDFFKFDTGNLCMVTGGTNLGRIG 165
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/47 (74%), Positives = 38/47 (80%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MA P+KHLK + APK WMLDKL GV+AP PSTGPHKLRECLPL F
Sbjct: 1 MAHSPRKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIF 47
Score = 53.2 bits (122), Expect(2) = 2e-43
Identities = 29/61 (47%), Positives = 32/61 (52%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI Q IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIRMQHFIKMDG 74
Query: 252 K 254
K
Sbjct: 75 K 75
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 168 bits (408), Expect = 1e-40
Identities = 78/161 (48%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P + P + L+ RL YAL G +V I+ K++ + VDGKVR D YP G MDVV I
Sbjct: 145 PHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRI 204
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDP 485
KT++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RTIR+P+P
Sbjct: 205 EKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNP 264
Query: 486 LIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
IK+ D+++ D+ KI +F ESGN+C I G N+G G
Sbjct: 265 EIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVG 305
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/26 (80%), Positives = 26/26 (100%)
Frame = +2
Query: 32 ARGPKKHLKRLNAPKAWMLDKLGGVY 109
ARGPKKHLKR+NAPK+WML+KLGG++
Sbjct: 83 ARGPKKHLKRINAPKSWMLNKLGGIW 108
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 151 bits (366), Expect = 1e-35
Identities = 75/162 (46%), Positives = 95/162 (58%)
Frame = +3
Query: 123 QPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 302
+P P P L+ +RNRLKYAL E I++Q L+ VD R D YPAGFMDVV
Sbjct: 29 RPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPAGFMDVVE 88
Query: 303 IXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 482
I KT + FRL+YDVKGRF + ++ EA+ KL KV + T VP VTHDG IRYPD
Sbjct: 89 IPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDGHRIRYPD 148
Query: 483 PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
P + D+I ++ K +D IK G ++TGG N G G
Sbjct: 149 PHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIG 190
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 44 KKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
KKHLKRL APK WML KL GV+APRP GPHKLRECLPL
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPL 41
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 105 bits (252), Expect = 8e-22
Identities = 57/153 (37%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 153 CPWLIFLRNR-LKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFR 329
C L +L +R L+YA E+ I+ ++ IKV+G+VRT+ +P G DVVSI KT E FR
Sbjct: 41 CIPLGYLISRFLRYASNFKELSIILAEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFR 100
Query: 330 LIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSI 509
++Y+V +F +HRI+ EEA Y+L KV + + +PY+V+ G +IR+ DP I + +I
Sbjct: 101 VLYNVHKKFHLHRISSEEASYRLTKVTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTI 159
Query: 510 QLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
++ T+K++++I + ++ G+ G G
Sbjct: 160 KISNETSKVIEYIVPGPDKVIFVSRGKARGRVG 192
Score = 63.7 bits (148), Expect = 3e-09
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
M G + HLKR APK+WMLDK GG +A P++GPHK EC+PL
Sbjct: 1 MPTGHRDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPL 44
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 97.9 bits (233), Expect = 2e-19
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Frame = +3
Query: 123 QPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 302
+P P + P L+ +RN L YA T E K++ + +VDG VR D +P GFMDV+
Sbjct: 33 RPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFMDVIE 92
Query: 303 IXKTNELFRLI-YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI--R 473
+ T E FR++ Y VK F +H I EE K +++ T L HDGR I R
Sbjct: 93 VVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVR 151
Query: 474 YPDP------LIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
DP + + D++ + + +I IKF G + +I GGRN+G G
Sbjct: 152 VKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVG 202
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 MAR-GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
MAR G ++ LK L AP+ W + + +A +P GPH + LPL
Sbjct: 1 MARMGGQRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPL 45
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 94.3 bits (224), Expect = 2e-18
Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P S S+ P I LR+ YA T E +I+ R+I+VDG+V TD +P G MDV+ I
Sbjct: 36 PGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRVIEVDGRVVTDYKFPVGLMDVLHI 95
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI----- 470
+ +R++ D + I PEEA YKL +++R T HDGR +
Sbjct: 96 IPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKG 155
Query: 471 --RYPDPL-IKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
Y + K D++ + I I+ + FE G L ++ GRN+G G
Sbjct: 156 SEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTLAIVVDGRNVGFMG 204
Score = 37.9 bits (84), Expect = 0.19
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 20 LSNMARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
+ +G +HL+R AP W + + V+ +PS GPH L +P+
Sbjct: 1 MGRKVKGSLRHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPI 47
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 90.6 bits (215), Expect = 3e-17
Identities = 52/149 (34%), Positives = 75/149 (50%)
Frame = +3
Query: 162 LIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYD 341
L +R+ LK + E +I+ L+KVDGK + + GFMDV+ I E +R++Y+
Sbjct: 41 LSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYN 98
Query: 342 VKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDI 521
+G + + T E A KL KV+ P N L THDGRT D KV D + +
Sbjct: 99 DQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSV 158
Query: 522 ATTKIMDFIKFESGNLCMITGGRNLGACG 608
KI + IK + GN IT G ++ G
Sbjct: 159 PDMKISEIIKMQPGNKAYITAGSHVNQTG 187
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 89.8 bits (213), Expect = 4e-17
Identities = 48/148 (32%), Positives = 79/148 (53%)
Frame = +3
Query: 165 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDV 344
+ +R+ LK A E +I+ + VDG+V D +P GFMD++ I KT E++R++ D
Sbjct: 47 LVIRDILKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDK 106
Query: 345 KGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIA 524
KGR +++I EE KLCK+ +T + HDG+ + + V D I L +
Sbjct: 107 KGRLQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVP 164
Query: 525 TTKIMDFIKFESGNLCMITGGRNLGACG 608
+I + + + G +ITGG++ G G
Sbjct: 165 DHEINEVFELKEGACVLITGGKHTGELG 192
Score = 36.7 bits (81), Expect = 0.44
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 38 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
G +KHLK APK W + + +PS G H + L L
Sbjct: 5 GSRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSL 45
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 89.4 bits (212), Expect = 6e-17
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P S + P LI LR+ LK E+ +I+ ++KVDG++ D +P GFMDV+SI
Sbjct: 30 PATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVLSI 89
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRYPD 482
+ ++YD KG+ I + P KL K VK+ G + L HDG+TI
Sbjct: 90 DTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKI-QLGFHDGKTIVTDR 148
Query: 483 PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 599
I +D + + I +I + +K G+ ITGG ++G
Sbjct: 149 KDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVG 187
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 85.8 bits (203), Expect = 7e-16
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P S A + P + +R+ LKYA T +E I+ + +KVDG VR D +P G MDV+ I
Sbjct: 29 PGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEI 88
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGR---TIRY 476
T E++R++ D + + I+ EEA KL +V+ L HDGR T
Sbjct: 89 VPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLE 148
Query: 477 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
IK DS+ D+ I I + G ++ G N+G G
Sbjct: 149 AGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNVGFSG 192
Score = 42.3 bits (95), Expect = 0.009
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 50 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLA 163
HL+R AP W + K GGV+ RPS GPH L LPLA
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLA 41
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/156 (28%), Positives = 76/156 (48%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P S + L ++ A E K+VK + V+GK +P MD +S
Sbjct: 35 PHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPL 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
N+ +R++ G+ T++ I E K+CKV ++ ++T D R ++ I
Sbjct: 95 ANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 599
KV DS+ + +I+ +KFE G+LC+IT G++LG
Sbjct: 155 KVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLG 190
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 84.6 bits (200), Expect = 2e-15
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P S + P L+ +R+ LKYA E KI++ I +DG R + +PAG MDV+SI
Sbjct: 34 PGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSI 93
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV--KRVATGPKNVPYLVTHDGR----- 464
+ +E + +++D GR ++ + ++ KLCK+ K V G N+ L HDGR
Sbjct: 94 PEMDETYLVLFDESGRISLKK--TDKTDVKLCKIVNKTVVKG-GNI-QLNLHDGRNQIVK 149
Query: 465 ---TIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLG 599
+ + + K DS+ + I I + F G L ITGG+++G
Sbjct: 150 VSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVG 197
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 35 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
+GP+KHLKRL AP W L + + RPS GPH + + LPL
Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPL 45
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 84.6 bits (200), Expect = 2e-15
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P + ++ P LI +R+ L YA E KI+ + I VDG VR +P +P G MDVV I
Sbjct: 37 PGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIMDVVEI 96
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT--IRYP 479
+T + +R++ + R + I+ EEA+ K+C++K + HDG+ +
Sbjct: 97 PRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEIE 156
Query: 480 DP------LIKVNDSIQLDI------ATTKIMDFIKFESGNLCMITGGRNLGACG 608
DP + V DS+ L++ + K++D I FE G GR+ G G
Sbjct: 157 DPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWVYAMTGRHSGEVG 211
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +2
Query: 38 GPKKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPL 160
GPK+H+KRL AP AW + K GG +APRP GPH + +PL
Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPL 48
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 84.2 bits (199), Expect = 2e-15
Identities = 50/162 (30%), Positives = 81/162 (50%)
Frame = +3
Query: 123 QPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 302
+P P S A + P + +R+ LK E +I+ + + VDG R D +P G DV++
Sbjct: 27 RPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVIT 86
Query: 303 IXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 482
+ NE +R++ D KGR ++++ E KLC++ T L +DG I +
Sbjct: 87 LPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRINNKTTVKGGKIQLNLNDGTNILGSN 145
Query: 483 PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
DS+ L I ++ +KFE GNL M+ GG++ G G
Sbjct: 146 D-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETG 186
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 50 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
H KRL+ PK+W + + G + GPH LPL
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPL 39
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 79.0 bits (186), Expect = 8e-14
Identities = 48/151 (31%), Positives = 75/151 (49%)
Frame = +3
Query: 156 PWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLI 335
P ++ LR+ LK A +E+ KI+ + + VDGKVR D Y G D +SI N +R++
Sbjct: 40 PLVVVLRDLLKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVV 99
Query: 336 YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQL 515
+ G+F H + +A K+CK+ L HDG T+ + K DS+ L
Sbjct: 100 IGMDGKF--HLVPVTDASAKICKIVNKTALRGGKIQLNLHDGTTMIASND-YKTKDSVIL 156
Query: 516 DIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ KI + G+L M+T G++ G G
Sbjct: 157 KMPERKIDQHFTYAVGSLVMVTEGKHSGEIG 187
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 79.0 bits (186), Expect = 8e-14
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P S+ P + LR+ YA T E I+ + +KVDGKVR D YP G MDV+ +
Sbjct: 28 PGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGYVKVDGKVRRDYKYPVGLMDVIEL 87
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI---RY 476
NE +R+I D RI EA K+C+++ L HDGR I +
Sbjct: 88 TPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVKAGKIQLNLHDGRNIIVDQD 147
Query: 477 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ S+ +++ K+MD+ + + G N+G G
Sbjct: 148 EGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFNGVNVGRHG 191
Score = 38.7 bits (86), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 50 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLA 163
HL+R +P+ W +++ G ++ +PS GPH +PLA
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLA 40
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 79.0 bits (186), Expect = 8e-14
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Frame = +3
Query: 144 ASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNEL 323
A A P ++LR + A +EV KI+ QR + V+G+ D G D+VSI K +
Sbjct: 34 AGALPVGVWLREHIGLAQNASEVKKILHQRDVLVNGRACKDSRMGLGVFDIVSIPKLGKH 93
Query: 324 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVND 503
+R+ DVKG I E AK +LCK++ T L G + D K D
Sbjct: 94 YRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKD 152
Query: 504 SIQLDIATT-----KIMDFIKFESGNLCMITGGRNLGACG 608
S+ + + T +I+D + GN+ MI GG++ G G
Sbjct: 153 SVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVG 192
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 76.2 bits (179), Expect = 6e-13
Identities = 46/162 (28%), Positives = 79/162 (48%)
Frame = +3
Query: 123 QPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 302
+P P + + P + LR+ L E +++ + + VDG R D +P G MD+++
Sbjct: 28 RPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGNVLVDGVARKDLRFPVGLMDIIT 87
Query: 303 IXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD 482
I N +R++ D K R ++++ A KLC+++ + + + +DG I
Sbjct: 88 IPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIEGKTSIKEGKIQMRLNDGVNI-IGS 145
Query: 483 PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
DSI L + K++ IK+E GNL MI GG + G G
Sbjct: 146 NNYNTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVG 187
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 50 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLA 163
H KR++ PK+W + K + GPH + +PLA
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLA 41
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 75.8 bits (178), Expect = 8e-13
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P I L+ LK T E +I+ + VDGKVR D YP G MDVV I
Sbjct: 30 PHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDVVEIPS 89
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP-DPL 488
+ R+I D T I+ E+AKYK ++ T V L DGR I + L
Sbjct: 90 ADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEEL 149
Query: 489 IKVN----DSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ N ++++++ KI + G MI GGRN G G
Sbjct: 150 SQYNLPTLTTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHG 193
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 74.5 bits (175), Expect = 2e-12
Identities = 51/151 (33%), Positives = 74/151 (49%)
Frame = +3
Query: 147 SACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELF 326
S+ P LI LR+ LK E+ +I+ L+ VDGKV + GFMD +++ + L
Sbjct: 36 SSIPLLIALRDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTVSGNDYL- 94
Query: 327 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 506
+ YD KG+ I E KL +VK + HDG T+ IK DS
Sbjct: 95 -VSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDS 153
Query: 507 IQLDIATTKIMDFIKFESGNLCMITGGRNLG 599
+ + I +I+D +KF GN ITGG ++G
Sbjct: 154 VLVKIPKKEIVDVLKFAPGNRVFITGGSHVG 184
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 74.1 bits (174), Expect = 2e-12
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Frame = +3
Query: 126 PVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 305
P P S A P ++LR+ L A EV ++ + VDG+ D +P G DV++I
Sbjct: 34 PGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAI 93
Query: 306 XKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VKRVATGPKNVPYLVTHDGRTIRYPD 482
+ NE +R++ D +G+ + +I EEA K K +++V+ + Y +T DGRT D
Sbjct: 94 PEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGD 151
Query: 483 PLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
K + + +I KI + I E I G++ G G
Sbjct: 152 NSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRIG 193
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 44 KKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLA 163
K+HL+ L P+ W + K G + +PS GPH +P+A
Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIA 46
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 68.1 bits (159), Expect = 2e-10
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +3
Query: 156 PWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLI 335
P + LR+ L A E +++ R + VDG++ TD G MDV+++ + + FR I
Sbjct: 40 PLGVILRDVLDLAHNLREAKRMLATRQVLVDGRIETDLGRGVGLMDVLTVGEDS--FRCI 97
Query: 336 YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPD-PLIKVNDSIQ 512
DV G+ I+ + A KLC+V +T + HDGR I D L D++
Sbjct: 98 LDVNGKLRYRSISDKAAASKLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLV 157
Query: 513 LDIATTKIMDFIKFESGNLCMITGGRNLG 599
+ + + F G +TGG ++G
Sbjct: 158 ISLPDQSVAGHHPFSKGATAYLTGGSHIG 186
Score = 37.5 bits (83), Expect = 0.25
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 50 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPL 160
H+KRL P++W L + ++ +P+ G H C+PL
Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPL 41
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/151 (27%), Positives = 68/151 (45%)
Frame = +3
Query: 156 PWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLI 335
P + LR+ L T E K + ++VDG RT + G MDVV + T +++R++
Sbjct: 44 PSAVLLRDTLGAVSTLREAKKSIYSGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMV 103
Query: 336 YDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQL 515
+I E K+C+V + + HDGR++ D + V DS +
Sbjct: 104 PSGGAILKPVKIEAAEKDRKICRVTSKTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLV 162
Query: 516 DIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+ KI+ + E G ++T G N G+ G
Sbjct: 163 QVPGQKILKVARMEKGAHAVVTRGTNAGSTG 193
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 60.5 bits (140), Expect = 3e-08
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Frame = +3
Query: 147 SACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELF 326
S P LI LR+ L YA E + + + ++GK +D P G D+++ + E +
Sbjct: 35 SGVPLLIVLRDVLGYADNRKEARYALNEDNVLINGKAISDEERPVGMFDILAFTEREEYY 94
Query: 327 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT-IRYPDPLIKVND 503
R+ GR + I P+ A+ KL K+ L HDG T I D D
Sbjct: 95 RVFPGEGGRLALTAIDPDAAQSKLGKIVTKTHVSGGDVQLGLHDGETLIVEDDQTYDAGD 154
Query: 504 SIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
SI + +++ ++E G L G + G G
Sbjct: 155 SIVVGNEDGEVVAHFEYEEGALVTAVDGAHAGEVG 189
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 60.1 bits (139), Expect = 4e-08
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +3
Query: 147 SACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELF 326
SA P I+LR+ +++AL EV KI+ R + ++G + TD D++S K ++ +
Sbjct: 34 SALPIGIWLRDHMQFALNTKEVRKILHDRQVLLNGHIVTDEHIGIDVFDIISFPKIDKHY 93
Query: 327 RLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDS 506
++ D KGR + I+ + AK +L KV T + G + K DS
Sbjct: 94 MILVDEKGRHNEYEISADAAKLQLVKVANKTTIKGGKTQINLTSGANF-IGEENCKGKDS 152
Query: 507 IQLDIA---TTKIMDFIKFESGNLCMITGGRN 593
+ + IA + + GN+ +I GG++
Sbjct: 153 LVIGIAGDDRFAVQQHFPYAVGNMAIIIGGQH 184
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 50.4 bits (115), Expect = 3e-05
Identities = 32/106 (30%), Positives = 53/106 (50%)
Frame = -2
Query: 608 PTRPQVTASXDHTQVPRLKLDEVHNLXSCDV*LDGIVDFDKWVWVADGAAIMRYQVRNIL 429
P V + DH Q ++LD + +L DV +G+ D + V +GAA+++ R+ L
Sbjct: 88 PDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHAL 147
Query: 428 RSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISLXN*DNI 291
QLVL D V ES+L ++D + FI+L + D++
Sbjct: 148 VPELLAPHLAQLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_Q7U147 Cluster: PROBABLE OXIDASE; n=7; Mycobacterium
tuberculosis complex|Rep: PROBABLE OXIDASE -
Mycobacterium bovis
Length = 504
Score = 37.1 bits (82), Expect = 0.33
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 200 GQSILQTIPQENQ-PGASTRATCGDRLTVSVHTHRQVCPTSMLWERLSASNAS*GLAPCW 24
G I+ T+ N PG RAT GD + VSV T+R PTS+ W ++ N G P
Sbjct: 79 GGPIVSTLTYGNTIPGPLIRATVGDEIVVSV-TNRLGDPTSVHWHGIALRNDMDGTEPAT 137
Query: 23 TSI 15
+I
Sbjct: 138 ANI 140
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 37.1 bits (82), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 207 EVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKG 350
E L I KQ+ +KV+ K + DPT+P D SI +++ L+ + KG
Sbjct: 126 EELDINKQQKVKVEHKKQLDPTFPRNDFDKFSIEDMDQVLNLLSNYKG 173
>UniRef50_A5BNN8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 906
Score = 36.3 bits (80), Expect = 0.58
Identities = 32/103 (31%), Positives = 44/103 (42%)
Frame = -3
Query: 589 RPPVIIHKFPDSNLMKSIIXVVAMSNWMESLTLISGSG*RMVRPSCVTKYGTFLGPVATR 410
RPP H SN + S + A S +S+TLI +R T TF+ VA
Sbjct: 298 RPPRTAHIAQSSNPLLSRLDSTASST-SQSITLIGSDYDAYLRYQAATS--TFVASVAQT 354
Query: 409 LTLHNLYLASSGVIRWIVNLPLTS*IRRNSSLVXSIETTSINP 281
+ + SS + WI++ + I N L SI TTS P
Sbjct: 355 DNVSVCFTQSSSLGPWILDSGASDHISGNKHLFSSITTTSALP 397
>UniRef50_UPI000038E364 Cluster: hypothetical protein Faci_03000514;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000514 - Ferroplasma acidarmanus fer1
Length = 317
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 323 QFISLXN*DNIHKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTI 177
Q I+ N +NI + I + N P E LFH F DFVSG ++ I
Sbjct: 50 QVINTYNDENILEIINIPDIKYNIPDAEKEILFHKFIDFVSGNKLISGI 98
>UniRef50_A7SI31 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1939
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1
Query: 213 GLRFRSKHTSDDSSGKSARGKHSRNLWGPVDGLGAYTPPSLSNIHA 76
GLR + K D+ +G+S RGK + ++ PVDGL PSL N A
Sbjct: 1420 GLRLQLKDRFDNLTGESIRGKVAVSVVSPVDGLDEI--PSLCNASA 1463
>UniRef50_UPI00015BAF49 Cluster: histidinol dehydrogenase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: histidinol
dehydrogenase - Ignicoccus hospitalis KIN4/I
Length = 404
Score = 33.5 bits (73), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 195 KHTSDDSSGKSARGKHSRNLWGPVDGLGAYTPPSL 91
K T+ S S++G + LW PV+ LGAY P L
Sbjct: 98 KQTAPKDSAFSSKGVRAVTLWRPVERLGAYVPGGL 132
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 5.4
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 444 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 578
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q02CR2 Cluster: TonB-dependent receptor, plug precursor;
n=1; Solibacter usitatus Ellin6076|Rep: TonB-dependent
receptor, plug precursor - Solibacter usitatus (strain
Ellin6076)
Length = 1007
Score = 33.1 bits (72), Expect = 5.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 458 WPHHPLPRPTYQSQRFHPVRHRNYXDYGLHQV*VWELVYDHXRP*LGGVW 607
W +P P P + FHP + D H+ +W +VY++ P LG W
Sbjct: 594 WEFNPSPEPAGTTSFFHPETGTVFSD---HRP-LWPVVYNNFAPRLGAAW 639
>UniRef50_Q22BQ8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1926
Score = 32.7 bits (71), Expect = 7.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 395 LVLSLLRGDTVDCESALNIID*TKQFISLXN*DNIHKSSRISRVSPNFPI 246
+V + D +D + LNI D T+QFIS D K + +S ++ NF I
Sbjct: 295 IVYKMRNKDQIDIVTDLNITDQTQQFISFNISDYSFKQTSVSILNSNFTI 344
>UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precursor;
n=17; Amniota|Rep: Uncharacterized protein CXorf36
precursor - Homo sapiens (Human)
Length = 182
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 270 TYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 416
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>UniRef50_UPI000058722D Cluster: PREDICTED: similar to Ehf protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Ehf protein - Strongylocentrotus purpuratus
Length = 510
Score = 32.3 bits (70), Expect = 9.4
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -2
Query: 410 LDFTQLVLSLLRGDTVDCESALNIID*TKQFISLXN*DNIHKSS---RISRVSPNFPINL 240
+D T L+ LL G+ D S + + L D +HKS +++ SPN PINL
Sbjct: 110 MDLTMLMEDLLHGNMTDHFSHQLCDNQYHSNVGLGGNDGLHKSDFLDNLTQFSPNSPINL 169
Query: 239 YEALF 225
++F
Sbjct: 170 STSMF 174
>UniRef50_A4Y015 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas mendocina ymp
Length = 783
Score = 32.3 bits (70), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 512 LDGIVDFDKWVWVADGAAIMRYQVRNILRSGRHTLDFTQLVLSLLR 375
L+ I+ F + + + G + QVR+ILR+GRH L VL + R
Sbjct: 420 LNSILGFAQLLEMDRGTPAQQAQVRHILRAGRHLLGLINEVLDIAR 465
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,623,033
Number of Sequences: 1657284
Number of extensions: 13508627
Number of successful extensions: 37473
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 36180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37454
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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