Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P02
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 252 7e-67
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 252 1e-66
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 252 1e-66
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 252 1e-66
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 252 1e-66
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 252 1e-66
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 252 1e-66
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 252 1e-66
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 251 2e-66
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 251 2e-66
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 241 1e-63
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 241 1e-63
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 241 1e-63
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 241 1e-63
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 241 1e-63
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 241 1e-63
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 228 1e-59
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 94 4e-19
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 33 1.1
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 2.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 5.6
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 5.6
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.5
X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for ... 29 9.9
X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for ... 29 9.9
X14085-1|CAA32247.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.9
X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein. 29 9.9
U10474-1|AAA68220.1| 340|Homo sapiens beta-1,4-galactosyltransf... 29 9.9
U10473-1|AAA68219.1| 308|Homo sapiens beta-1,4-galactosyltransf... 29 9.9
M70432-1|AAB00776.1| 400|Homo sapiens beta-1,4-galactosyltransf... 29 9.9
M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta 1,4-... 29 9.9
M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta 1,4-... 29 9.9
M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human galactosy... 29 9.9
D29805-1|BAA06188.1| 398|Homo sapiens beta-1,4-galactosyltransf... 29 9.9
BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein. 29 9.9
AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta... 29 9.9
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 252 bits (617), Expect = 7e-67
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIF 47
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVRTD TYPAGFMDV+SI KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 251 bits (614), Expect = 2e-66
Identities = 114/159 (71%), Positives = 130/159 (81%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P P +IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI K
Sbjct: 16 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 75
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 76 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 135
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
KVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 136 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 174
Score = 51.2 bits (117), Expect = 3e-06
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 83 MLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MLDKL GV+APRPS GPHKLRECLPL F
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIF 28
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 251 bits (614), Expect = 2e-66
Identities = 114/159 (71%), Positives = 130/159 (81%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P P +IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI K
Sbjct: 15 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 74
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 75 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 134
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
KVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLG G
Sbjct: 135 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 173
Score = 54.0 bits (124), Expect = 4e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2
Query: 89 DKLGGVYAPRPSTGPHKLRECLPLADF 169
DKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIF 27
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 14 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 73
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 192
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 32 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 46
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 241 bits (590), Expect = 1e-63
Identities = 110/179 (61%), Positives = 132/179 (73%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGFMDV+SI KT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 228 bits (557), Expect = 1e-59
Identities = 104/179 (58%), Positives = 127/179 (70%)
Frame = +3
Query: 72 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 251
PKH L P P ++FLRNRLKYALTG+EV KI Q +K+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDG 74
Query: 252 KVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
KVR D TYPAGF+DV+SI KT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
+P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+CM+ G NLG G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVG 193
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 93.9 bits (223), Expect = 4e-19
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADFPEESSEVCFDRK 205
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F + DR+
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 270 TYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 416
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 270 TYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 416
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 180 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIXKTNELFRLIYDVKGRF 356
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 357 TIHRI 371
HRI
Sbjct: 98 KKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 180 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIXKTNELFRLIYDVKGRF 356
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 357 TIHRI 371
HRI
Sbjct: 843 KKHRI 847
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 261 TDPTYPAGFM-DVVSIXKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 425
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>X55415-2|CAA39074.1| 385|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 149 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 176
>X55415-1|CAA39073.1| 398|Homo sapiens protein ( Human mRNA for
UDP_galactose:N-acetylglucosaminide-(beta 1->4)
galactosyltransferase. ).
Length = 398
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 162 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 189
>X14085-1|CAA32247.1| 400|Homo sapiens
beta-1,4-galactosyltransferase (AA -77 to 323) protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 161 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 188
>X13223-1|CAA31611.1| 398|Homo sapiens lactose synthase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 162 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 189
>U10474-1|AAA68220.1| 340|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 340
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 161 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 188
>U10473-1|AAA68219.1| 308|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 308
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 72 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 99
>M70432-1|AAB00776.1| 400|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 400
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 161 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 188
>M22921-2|AAA35937.1| 385|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 385
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 149 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 176
>M22921-1|AAA35936.1| 397|Homo sapiens protein ( Human beta
1,4-galactosyl-transferase mRNA, complete cds. ).
Length = 397
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 161 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 188
>M13701-1|AAA35935.1| 261|Homo sapiens protein ( Human
galactosyltransferase mRNA, 3' end. ).
Length = 261
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 25 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 52
>D29805-1|BAA06188.1| 398|Homo sapiens
beta-1,4-galactosyltransferase protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 162 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 189
>BC045773-1|AAH45773.1| 225|Homo sapiens B4GALT1 protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 162 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 189
>AL161445-4|CAD13306.1| 398|Homo sapiens UDP-Gal:betaGlcNAc beta
1,4-galactosyltransferase, polypeptide 1 protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 92 KLGGVYAPRPSTGPHKLRECLPLADFPE 175
K+GG YAPR PHK+ +P + E
Sbjct: 162 KMGGRYAPRDCVSPHKVAIIIPFRNRQE 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,736,676
Number of Sequences: 237096
Number of extensions: 2132107
Number of successful extensions: 13481
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13479
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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