Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_P02
(615 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 255 3e-68
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 255 3e-68
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 255 3e-68
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 250 2e-66
AE014297-2439|AAF55493.3| 430|Drosophila melanogaster CG14316-P... 29 3.8
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 6.6
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 6.6
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 6.6
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 255 bits (625), Expect = 3e-68
Identities = 117/159 (73%), Positives = 132/159 (83%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P LIFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++ K
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLG G
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 255 bits (625), Expect = 3e-68
Identities = 117/159 (73%), Positives = 132/159 (83%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P LIFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++ K
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLG G
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 255 bits (625), Expect = 3e-68
Identities = 117/159 (73%), Positives = 132/159 (83%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P LIFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++ K
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLG G
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 250 bits (611), Expect = 2e-66
Identities = 115/159 (72%), Positives = 130/159 (81%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXK 311
P + P L FLRNRLKYAL G EV KIV QRL+KV GKVRTDPTYPAG+MDV+++ K
Sbjct: 35 PHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEK 94
Query: 312 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 491
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 492 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGACG 608
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLG G
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVG 193
Score = 94.7 bits (225), Expect = 9e-20
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 29 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 169
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTF 47
>AE014297-2439|AAF55493.3| 430|Drosophila melanogaster CG14316-PA
protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 132 PTSCASACPWLIFLRNRLKYALTG-NEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIX 308
PTSC S C +L L L L G NE+LK+ +K+ ++R + +VV
Sbjct: 209 PTSCISHCKYLSNLFVNLDTFLAGQNEILKLPSLTELKIT-EIRENKDTTKALANVVQ-T 266
Query: 309 KTNEL 323
K NEL
Sbjct: 267 KGNEL 271
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,941,769
Number of Sequences: 53049
Number of extensions: 656610
Number of successful extensions: 1569
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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