Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_P01
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92781-3|CAB07182.1|  326|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z92781-3|CAB07182.1|  326|Caenorhabditis elegans Hypothetical
           protein F09C3.4 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 201 LRLRWSTKSSLSCRSYSWLAVCSSSVAR 118
           +RL W   + +SC SY+W  V  +S+ +
Sbjct: 131 IRLSWLDLAPISCTSYNWTGVDVNSIVK 158


>AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical
           protein Y54E5B.2 protein.
          Length = 861

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 167 LKEDLVDHRNLNGKEVVVVITEDFVI 244
           LK+DL++  NLNGK V++    + ++
Sbjct: 266 LKDDLMNFANLNGKLVILTADNELIL 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,128,886
Number of Sequences: 27780
Number of extensions: 96641
Number of successful extensions: 266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)