Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_O20
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68747-1|CAA92951.1|  395|Homo sapiens imogen 38 protein.              28   5.0  
BC022045-1|AAH22045.1|  395|Homo sapiens mitochondrial ribosomal...    28   5.0  
AL355132-2|CAH70977.1|  395|Homo sapiens mitochondrial ribosomal...    28   5.0  
AL161614-1|CAH72771.1|  395|Homo sapiens mitochondrial ribosomal...    28   5.0  

>Z68747-1|CAA92951.1|  395|Homo sapiens imogen 38 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 194 LKHFISLISCQIQKYVYLNYNRKCTH 117
           ++HF+ L++C + K  YL+  +K  H
Sbjct: 347 IRHFMELVTCGLSKNPYLSVKQKVEH 372


>BC022045-1|AAH22045.1|  395|Homo sapiens mitochondrial ribosomal
           protein S31 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 194 LKHFISLISCQIQKYVYLNYNRKCTH 117
           ++HF+ L++C + K  YL+  +K  H
Sbjct: 347 IRHFMELVTCGLSKNPYLSVKQKVEH 372


>AL355132-2|CAH70977.1|  395|Homo sapiens mitochondrial ribosomal
           protein S31 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 194 LKHFISLISCQIQKYVYLNYNRKCTH 117
           ++HF+ L++C + K  YL+  +K  H
Sbjct: 347 IRHFMELVTCGLSKNPYLSVKQKVEH 372


>AL161614-1|CAH72771.1|  395|Homo sapiens mitochondrial ribosomal
           protein S31 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 194 LKHFISLISCQIQKYVYLNYNRKCTH 117
           ++HF+ L++C + K  YL+  +K  H
Sbjct: 347 IRHFMELVTCGLSKNPYLSVKQKVEH 372


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,282,979
Number of Sequences: 237096
Number of extensions: 597734
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)