Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_O19
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 109 4e-24
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 109 4e-24
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 109 4e-24
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 109 4e-24
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 108 1e-23
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 58 1e-08
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 2e-05
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 30 5.7
X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. 30 5.7
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 109 bits (263), Expect = 4e-24
Identities = 55/111 (49%), Positives = 72/111 (64%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 300
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKP
Sbjct: 15 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKP 73
Query: 301 AKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
A + +R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 74 ATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 109 bits (263), Expect = 4e-24
Identities = 55/111 (49%), Positives = 72/111 (64%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 300
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKP
Sbjct: 15 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKP 73
Query: 301 AKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
A + +R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 74 ATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 109 bits (263), Expect = 4e-24
Identities = 55/111 (49%), Positives = 72/111 (64%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 300
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKP
Sbjct: 15 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKP 73
Query: 301 AKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
A + +R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 74 ATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 109 bits (263), Expect = 4e-24
Identities = 55/111 (49%), Positives = 72/111 (64%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 300
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKP
Sbjct: 15 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKP 73
Query: 301 AKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
A + +R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 74 ATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 108 bits (260), Expect = 1e-23
Identities = 54/111 (48%), Positives = 72/111 (64%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 300
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKP
Sbjct: 15 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKP 73
Query: 301 AKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
A + +R AR +L ++ +++ N YR DL A +RRASAILR+Q+P+
Sbjct: 74 ATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRTQKPV 124
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +1
Query: 121 SLLKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKK 279
S L KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+
Sbjct: 23 SFLIKRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKR 74
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 313 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 453
+R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 66 TVKMSSSLNWMIIRNNNAFLAEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESRWCRGEP 245
T+ + S + +++ + + ++AV + +E CD PP++ + + S + G P
Sbjct: 3670 TITLDHSEGFSVLQEELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVP 3729
Query: 246 *QEGIHSS 269
EG SS
Sbjct: 3730 KTEGDSSS 3737
>X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.
Length = 1872
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 66 TVKMSSSLNWMIIRNNNAFLAEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESRWCRGEP 245
T+ + S + +++ + + ++AV + +E CD PP++ + + S + G P
Sbjct: 1585 TITLDHSEGFSVLQEELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVP 1644
Query: 246 *QEGIHSS 269
EG SS
Sbjct: 1645 KTEGDSSS 1652
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,699,873
Number of Sequences: 237096
Number of extensions: 1561363
Number of successful extensions: 13768
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13768
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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