Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_O18
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 279 1e-75
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 279 1e-75
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 277 7e-75
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 267 4e-72
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 192 1e-49
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 190 8e-49
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 144 4e-35
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 141 5e-34
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 2.2
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 5.2
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 6.8
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 6.8
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 27 9.1
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 9.1
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 279 bits (684), Expect = 1e-75
Identities = 126/171 (73%), Positives = 147/171 (85%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXXL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 507 MFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
MFGYATD TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQVT EY
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 176
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 279 bits (684), Expect = 1e-75
Identities = 126/171 (73%), Positives = 147/171 (85%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXXL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 507 MFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
MFGYATD TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQVT EY
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 176
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 277 bits (678), Expect = 7e-75
Identities = 126/171 (73%), Positives = 146/171 (85%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXXL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGD +
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 507 MFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
MFGYATD TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQVT EY
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEY 176
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 267 bits (655), Expect = 4e-72
Identities = 121/173 (69%), Positives = 146/173 (84%)
Frame = +3
Query: 141 SVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKA 320
S FLFTSESV EGHPDKMCDQISDA+L AHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 321 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDX 500
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGD
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 501 XLMFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
+MFGYATD TE MPLT++L+HK+N ++ +L RNG W RPDSK+QVT EY
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEY 175
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 192 bits (469), Expect = 1e-49
Identities = 86/125 (68%), Positives = 105/125 (84%)
Frame = +3
Query: 285 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 464
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 465 NRNDEEVGAGDXXLMFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQ 644
+++ ++VGAGD +MFGYATD TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 645 VTCEY 659
VT EY
Sbjct: 121 VTIEY 125
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 190 bits (463), Expect = 8e-49
Identities = 86/125 (68%), Positives = 104/125 (83%)
Frame = +3
Query: 285 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 464
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 465 NRNDEEVGAGDXXLMFGYATDXTEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQ 644
+++ +VGAGD +MFGYATD TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 645 VTCEY 659
VT EY
Sbjct: 121 VTIEY 125
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 146 bits (353), Expect = 2e-35
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKG 389
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 144 bits (350), Expect = 4e-35
Identities = 64/98 (65%), Positives = 79/98 (80%)
Frame = +3
Query: 366 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXXLMFGYATDXTEXCM 545
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD +MFGYATD TE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 546 PLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
PLT++L+HKLN K+ EL R+GE W RPDSKTQVT EY
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 117
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 141 bits (341), Expect = 5e-34
Identities = 64/103 (62%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Frame = +3
Query: 360 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDXXLMFGYATDX 530
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGD +MFGYATD
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 531 TEXCMPLTVVLAHKLNXKIAELXRNGEFWWARPDSKTQVTCEY 659
TE MPLT++L+HKLN K+ EL R+GE W RPDSKTQVT EY
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEY 135
Score = 80.2 bits (189), Expect = 1e-15
Identities = 46/86 (53%), Positives = 52/86 (60%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKT 404
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVAC 263
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQ 203
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 267 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 446
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 447 AAGV 458
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 313 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 405
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 386 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 264
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 386 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 264
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 277 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 402
KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 322 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 423
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,097,944
Number of Sequences: 27780
Number of extensions: 344231
Number of successful extensions: 876
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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